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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-m.9   MYB109   myb domain protein 109 
 ath-u.5   MYB109   myb domain protein 109 
 ath-r.7   MYB109   myb domain protein 109 
 ath-e.2   MYB109   myb domain protein 109 
 ath-m.4.bio   MYB109   myb domain protein 109 
 ath-m.4.hor   MYB109   myb domain protein 109 
 ath-m.4.lig   MYB109   myb domain protein 109 
 ath-m.4.str   MYB109   myb domain protein 109 
 ath-m.4.tis   MYB109   myb domain protein 109 
 ath-u.5   MYB25   myb domain protein 25 
 ath-u.5   MYB1   myb domain protein 1 
 bra-r.6   103859307   transcription factor MYB1 
 bra-r.6   103848231   transcription factor MYB1 
 bra-r.6   103867004   transcription factor MYB25 
 bna-r.1   106454673   transcription factor MYB25-like 
 bna-r.1   125580404   transcription factor MYB1-like 
 bna-r.1   BNAC04G05500D   transcription factor MYB25 
 ghi-r.1   107890991   transcription factor MYB1 
 ghi-r.1   107935473   transcription factor MYB1 
 ghi-r.1   107889749   transcription factor MYB1 
 cit-r.1   102618168   transcription factor MYB1 
 cit-r.1   102627279   transcription factor MYB1 
 gma-u.5   100811740   transcription factor MYB1 
 gma-u.5   100813406   transcription factor MYB1 
 gma-u.5   100817109   transcription factor MYB25 
 vvi-u.5   100256309   transcription factor MYB1 
 vvi-u.5   100247435   transcription factor MYB1-like 
 vvi-u.5   100240975   transcription factor MYB1 
 ppo-u.5   7487998   transcription factor MYB1 
 ppo-u.5   7458100   transcription factor MYB1 
 mtr-u.5   25491507   transcription factor MYB1 
 sly-u.5   101261736   transcription factor MYB1 
 sly-u.5   101252587   transcription factor MYB1 
 sot-r.1   102590968   transcription factor MYB122 
 sot-r.1   102591034   myb-related protein B 
 nta-r.1   107760863   transcription factor MYB25 
 nta-r.1   107774948   transcription factor MYB1-like 
 nta-r.1   107803799   transcription factor MYB1-like 
 osa-u.5   4324801   transcription factor MYB1 
 zma-u.5   100273738   MYB transcription factor 
 sbi-r.1   8058913   transcription factor MYB1 
 bdi-r.1   100827463   transcription factor MYB1 

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Top 50 coexpressed genes to MYB109 (ath-m.9 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to MYB109 (ath-m.9 coexpression data)

CoexMap"824739"


athMYB109 | Entrez gene ID : 824739      
Species ath bra bna ghi cit gma vvi ppo mtr sly sot nta osa zma sbi bdi tae cre hvu
Paralog 11 3 3 3 2 3 3 2 1 2 2 3 1 1 1 1 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006355 [list] [network] regulation of DNA-templated transcription  (1618 genes)  TAS  
GO CC
GO:0016607 [list] [network] nuclear speck  (52 genes)  IDA  
GO:0005634 [list] [network] nucleus  (10367 genes)  HDA ISM  
GO:0005737 [list] [network] cytoplasm  (14000 genes)  HDA  
GO MF
GO:0000976 [list] [network] transcription cis-regulatory region binding  (716 genes)  IPI  
GO:0003700 [list] [network] DNA-binding transcription factor activity  (1620 genes)  ISS  
Protein NP_191132.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 10  (predict for NP_191132.1)
Subcellular
localization
TargetP
other 9  (predict for NP_191132.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-m.9
for
MYB109
ath-u.5
for
MYB109
ath-r.7
for
MYB109
ath-e.2
for
MYB109
ath-m.4.bio
for
MYB109
ath-m.4.hor
for
MYB109
ath-m.4.lig
for
MYB109
ath-m.4.str
for
MYB109
ath-m.4.tis
for
MYB109
ath-u.5
for
MYB25
ath-u.5
for
MYB1
bra-r.6
for
103859307
bra-r.6
for
103848231
bra-r.6
for
103867004
bna-r.1
for
106454673
bna-r.1
for
125580404
bna-r.1
for
BNAC04G05500D
ghi-r.1
for
107890991
ghi-r.1
for
107935473
ghi-r.1
for
107889749
cit-r.1
for
102618168
cit-r.1
for
102627279
gma-u.5
for
100811740
gma-u.5
for
100813406
gma-u.5
for
100817109
vvi-u.5
for
100256309
vvi-u.5
for
100247435
vvi-u.5
for
100240975
ppo-u.5
for
7487998
ppo-u.5
for
7458100
mtr-u.5
for
25491507
sly-u.5
for
101261736
sly-u.5
for
101252587
sot-r.1
for
102590968
sot-r.1
for
102591034
nta-r.1
for
107760863
nta-r.1
for
107774948
nta-r.1
for
107803799
osa-u.5
for
4324801
zma-u.5
for
100273738
sbi-r.1
for
8058913
bdi-r.1
for
100827463


Ortholog ID: 3785
Species ath ath ath bra bra bra bna bna bna ghi ghi ghi cit cit gma gma gma vvi vvi vvi ppo ppo mtr sly sly sot sot nta nta nta osa zma sbi bdi
Symbol MYB109 MYB25 MYB1 LOC103859307 LOC103848231 LOC103867004 LOC106439209 BNAA09G35310D LOC106352981 LOC107890991 LOC107889749 LOC107951568 LOC102618168 LOC102627279 LOC100813406 LOC100817109 LOC100781228 LOC100256309 LOC100247435 LOC100240975 LOC7487998 LOC7458100 LOC25491507 LOC101261736 LOC101252587 LOC102590968 LOC102591034 LOC107760863 LOC107803799 LOC107799770 LOC4324801 LOC100273738 LOC8058913 LOC100827463
Function* myb domain protein 109 myb domain protein 25 myb domain protein 1 transcription factor MYB1 transcription factor MYB1 transcription factor MYB25 transcription factor MYB1-like transcription factor MYB25 transcription factor MYB1 transcription factor MYB1 transcription factor MYB1 transcription factor MYB1 transcription factor MYB1 transcription factor MYB1 transcription factor MYB1 transcription factor MYB25 transcription factor MYB25 transcription factor MYB1 transcription factor MYB1-like transcription factor MYB1 transcription factor MYB1 transcription factor MYB1 transcription factor MYB1 transcription factor MYB1 transcription factor MYB1 transcription factor MYB122 myb-related protein B transcription factor MYB25 transcription factor MYB1-like transcription factor MYB25-like transcription factor MYB1 MYB transcription factor transcription factor MYB1 transcription factor MYB1
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath01200 Carbon metabolism 3
ath00020 Citrate cycle (TCA cycle) 2
ath00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00052 Galactose metabolism 2
bra00514 Other types of O-glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04136 Autophagy - other 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00380 Tryptophan metabolism 4
bna04075 Plant hormone signal transduction 4
bna00908 Zeatin biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 4
ghi03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 4
ghi03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00190 Oxidative phosphorylation 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 2
cit03008 Ribosome biogenesis in eukaryotes 2
cit03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04712 Circadian rhythm - plant 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00541 Biosynthesis of various nucleotide sugars 2
gma00561 Glycerolipid metabolism 2
gma00566 Sulfoquinovose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00860 Porphyrin metabolism 2
gma01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 4
ppo03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 3
ppo04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly01230 Biosynthesis of amino acids 10
sly00400 Phenylalanine, tyrosine and tryptophan biosynthesis 8
sly00360 Phenylalanine metabolism 2
sly00940 Phenylpropanoid biosynthesis 2
sly01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis 3
nta04016 MAPK signaling pathway - plant 2
nta04626 Plant-pathogen interaction 2
nta03015 mRNA surveillance pathway 2
nta04382 Cornified envelope formation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03050 Proteasome 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 824739 818575 820079 103859307 103848231 103867004 106439209 106416209 106352981 107890991 107889749 107951568 102618168 102627279 100813406 100817109 100781228 100256309 100247435 100240975 7487998 7458100 25491507 101261736 101252587 102590968 102591034 107760863 107803799 107799770 4324801 100273738 8058913 100827463
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