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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-m.9   TTA2   fibronectin type III domain protein (DUF1423) 
 ath-u.5   TTA2   fibronectin type III domain protein (DUF1423) 
 ath-r.7   TTA2   fibronectin type III domain protein (DUF1423) 
 ath-e.2   TTA2   fibronectin type III domain protein (DUF1423) 
 ath-m.4.bio   TTA2   fibronectin type III domain protein (DUF1423) 
 ath-m.4.hor   TTA2   fibronectin type III domain protein (DUF1423) 
 ath-m.4.lig   TTA2   fibronectin type III domain protein (DUF1423) 
 ath-m.4.str   TTA2   fibronectin type III domain protein (DUF1423) 
 ath-m.4.tis   TTA2   fibronectin type III domain protein (DUF1423) 
 bra-r.6   103830858   protein OBERON 4 
 bna-r.1   106400638   protein OBERON 4 
 bna-r.1   106353726   protein OBERON 4-like 
 ghi-r.1   107900758   protein OBERON 4 
 ghi-r.1   107938339   protein OBERON 4 
 cit-r.1   102611010   protein OBERON 4 
 gma-u.5   100807816   protein OBERON 4 
 gma-u.5   100817003   protein OBERON 4 
 vvi-u.5   100248244   protein OBERON 4 
 ppo-u.5   7480068   protein OBERON 4 
 ppo-u.5   7482293   protein OBERON 4 
 mtr-u.5   11445049   protein OBERON 4 
 sly-u.5   101250443   protein OBERON 4 
 sot-r.1   102583708   protein OBERON 4 
 nta-r.1   107825898   protein OBERON 4 
 nta-r.1   107792934   protein OBERON 4 
 osa-u.5   9267543   protein OBERON 4 
 zma-u.5   103639433   protein OBERON 4 
 tae-r.2   123085158   protein OBERON 4 
 tae-r.2   123092953   protein OBERON 4 
 tae-r.2   123098222   protein OBERON 4 
 hvu-r.1   123449296   protein OBERON 4-like 
 sbi-r.1   8085295   protein OBERON 4 
 bdi-r.1   100829534   protein OBERON 4 

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Top 50 coexpressed genes to TTA2 (ath-m.9 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to TTA2 (ath-m.9 coexpression data)

CoexMap"825525"


athTTA2 | Entrez gene ID : 825525      
Species ath bra bna ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 9 1 2 2 1 2 1 2 1 1 1 2 1 1 3 1 1 1 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0090421 [list] [network] embryonic meristem initiation  (22 genes)  IGI  
GO:0009880 [list] [network] embryonic pattern specification  (26 genes)  IGI  
GO:0001708 [list] [network] cell fate specification  (33 genes)  IGI  
GO CC
GO:0005634 [list] [network] nucleus  (10367 genes)  ISM  
GO MF
GO:0005515 [list] [network] protein binding  (5363 genes)  IPI  
Protein NP_001326078.1 [sequence] [blastp]
NP_191909.1 [sequence] [blastp]
NP_850743.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 9,  chlo 1,  cysk 1  (predict for NP_001326078.1)
nucl 9,  chlo 1,  cysk 1  (predict for NP_191909.1)
nucl 9  (predict for NP_850743.1)
Subcellular
localization
TargetP
other 8,  chlo 3  (predict for NP_001326078.1)
other 8,  chlo 3  (predict for NP_191909.1)
other 8  (predict for NP_850743.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-m.9
for
TTA2
ath-u.5
for
TTA2
ath-r.7
for
TTA2
ath-e.2
for
TTA2
ath-m.4.bio
for
TTA2
ath-m.4.hor
for
TTA2
ath-m.4.lig
for
TTA2
ath-m.4.str
for
TTA2
ath-m.4.tis
for
TTA2
bra-r.6
for
103830858
bna-r.1
for
106400638
bna-r.1
for
106353726
ghi-r.1
for
107900758
ghi-r.1
for
107938339
cit-r.1
for
102611010
gma-u.5
for
100807816
gma-u.5
for
100817003
vvi-u.5
for
100248244
ppo-u.5
for
7480068
ppo-u.5
for
7482293
mtr-u.5
for
11445049
sly-u.5
for
101250443
sot-r.1
for
102583708
nta-r.1
for
107825898
nta-r.1
for
107792934
osa-u.5
for
9267543
zma-u.5
for
103639433
tae-r.2
for
123085158
tae-r.2
for
123092953
tae-r.2
for
123098222
hvu-r.1
for
123449296
sbi-r.1
for
8085295
bdi-r.1
for
100829534


Ortholog ID: 10165
Species ath bra bna bna ghi ghi cit gma gma vvi ppo ppo mtr sly sot nta nta osa zma tae tae tae hvu sbi bdi
Symbol TTA2 LOC103830858 LOC106400638 LOC106353726 LOC107900758 LOC107938339 LOC102611010 LOC100807816 LOC100817003 LOC100248244 LOC7480068 LOC7482293 LOC11445049 LOC101250443 LOC102583708 LOC107825898 LOC107792934 LOC9267543 LOC103639433 LOC123085158 LOC123092953 LOC123098222 LOC123449296 LOC8085295 LOC100829534
Function* fibronectin type III domain protein (DUF1423) protein OBERON 4 protein OBERON 4 protein OBERON 4-like protein OBERON 4 protein OBERON 4 protein OBERON 4 protein OBERON 4 protein OBERON 4 protein OBERON 4 protein OBERON 4 protein OBERON 4 protein OBERON 4 protein OBERON 4 protein OBERON 4 protein OBERON 4 protein OBERON 4 protein OBERON 4 protein OBERON 4 protein OBERON 4 protein OBERON 4 protein OBERON 4 protein OBERON 4-like protein OBERON 4 protein OBERON 4
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 2
ath03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 4
vvi03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03020 RNA polymerase 2
tae03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03020 RNA polymerase 2
tae03420 Nucleotide excision repair 2
tae03082 ATP-dependent chromatin remodeling 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 825525 103830858 106400638 106353726 107900758 107938339 102611010 100807816 100817003 100248244 7480068 7482293 11445049 101250443 102583708 107825898 107792934 9267543 103639433 123085158 123092953 123098222 123449296 8085295 100829534
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