ATTED-II : GeneCoexpression result

Species	Gene	Description
ppo-u.5	7480068	protein OBERON 4
ppo-r.4	7480068	protein OBERON 4
ppo-m.4	7480068	protein OBERON 4
ppo-u.5	7482293	protein OBERON 4
gma-u.5	100817003	protein OBERON 4
gma-u.5	100807816	protein OBERON 4
mtr-u.5	11445049	protein OBERON 4
ath-u.5	TTA2	fibronectin type III domain protein (DUF1423)
vvi-u.5	100248244	protein OBERON 4
sly-u.5	101250443	protein OBERON 4
osa-u.5	9267543	protein OBERON 4
zma-u.5	103639433	protein OBERON 4

functional annotation

KEGG

GO BP

GO CC

GO:0005634 [list] [network] nucleus

(3662 genes)

IEA

GO MF

Protein

XP_024449568.1 [sequence] [blastp]

Subcellular
localization
wolf

nucl 9, cyto 1, cysk 1

(predict for XP_024449568.1)

Subcellular
localization
TargetP

chlo 7, other 3

(predict for XP_024449568.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target			Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	ppo-u.5 for 7480068 .	ppo-r.4 for 7480068 .	ppo-m.4 for 7480068 .	ppo-u.5 for 7482293 .	gma-u.5 for 100817003 .	gma-u.5 for 100807816 .	mtr-u.5 for 11445049 .	ath-u.5 for TTA2 .	vvi-u.5 for 100248244 .	sly-u.5 for 101250443 .	osa-u.5 for 9267543 .	zma-u.5 for 103639433 .

Ortholog ID: 10165

Species

ath

gma

sly

osa

zma

bra

vvi

ppo

mtr

tae

hvu

ghi

bna

sbi

sot

cit

bdi

nta

Symbol

TTA2

Function^*

fibronectin type III domain protein (DUF1423)

protein OBERON 4

protein OBERON 4-like

protein OBERON 4

protein OBERON 4-like

protein OBERON 4

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03040	Spliceosome	2
ath03082	ATP-dependent chromatin remodeling	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04136	Autophagy - other	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03040	Spliceosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03040	Spliceosome	4
vvi03250	Viral life cycle - HIV-1	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03040	Spliceosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03040	Spliceosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03040	Spliceosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04146	Peroxisome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03020	RNA polymerase	2
tae03420	Nucleotide excision repair	2
tae03082	ATP-dependent chromatin remodeling	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03250	Viral life cycle - HIV-1	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03420	Nucleotide excision repair	2

Expression

Expression pattern

Entrez Gene ID^*

825525

100817003

100807816

101250443

9267543

103639433

103830858

100248244

7480068

7482293

11445049

123085158

123098222

123449296

107938339

107900758

106353726

106400638

8085295

102583708

102611010

100829534

107792934

107825898

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 7480068 (ppo-u.5 coexpression data)

Top 50 enrichment test to 7480068 (ppo-u.5 coexpression data)


Species	ppo	gma	mtr	ath	vvi	sly	osa	zma	tae	hvu	ghi	bdi	cit	bra	cre	sbi	bna	nta	sot
Paralog	4	2	1	1	1	1	1	1	0	0	0	0	0	0	0	0	0	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 7480068 (ppo-u.5 coexpression data)

Top 50 enrichment test to 7480068 (ppo-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**