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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-m.9   UBQ11   ubiquitin 11 
 ath-u.5   UBQ11   ubiquitin 11 
 ath-r.7   UBQ11   ubiquitin 11 
 ath-e.2   UBQ11   ubiquitin 11 
 ath-m.4.bio   UBQ11   ubiquitin 11 
 ath-m.4.hor   UBQ11   ubiquitin 11 
 ath-m.4.lig   UBQ11   ubiquitin 11 
 ath-m.4.str   UBQ11   ubiquitin 11 
 ath-m.4.tis   UBQ11   ubiquitin 11 
 ath-u.5   UBQ13   ubiquitin 13 
 bra-r.6   103834437   polyubiquitin 11 
 bra-r.6   103838224   polyubiquitin 
 bra-r.6   103839752   polyubiquitin 11 
 bna-r.1   106348160   polyubiquitin 
 bna-r.1   125588929   polyubiquitin 11-like 
 bna-r.1   106347129   polyubiquitin-like 
 ghi-r.1   107925174   polyubiquitin 
 ghi-r.1   107922157   polyubiquitin 
 ghi-r.1   107899654   polyubiquitin 
 cit-r.1   102627936   uncharacterized LOC102627936 
 cit-r.1   102609575   polyubiquitin 
 cit-r.1   102622806   polyubiquitin-like 
 gma-u.5   100800638   polyubiquitin 11 
 gma-u.5   100819694   polyubiquitin 
 gma-u.5   100817214   polyubiquitin 
 vvi-u.5   100267431   polyubiquitin 
 vvi-u.5   100252768   polyubiquitin 4 
 ppo-u.5   7485436   polyubiquitin 11 
 ppo-u.5   7454416   polyubiquitin 
 mtr-u.5   25492931   polyubiquitin 
 mtr-u.5   25502891   polyubiquitin 11 
 mtr-u.5   11422346   polyubiquitin-like 
 sly-u.5   101256039   polyubiquitin 
 sly-u.5   ubq1-1   ubiquitin 
 sly-u.5   101258282   polyubiquitin 
 sot-r.1   102599865   polyubiquitin 
 sot-r.1   102587932   polyubiquitin 
 sot-r.1   102586619   polyubiquitin-like 
 nta-r.1   107761578   polyubiquitin-like 
 nta-r.1   107762509   polyubiquitin 11 
 nta-r.1   107766655   polyubiquitin 
 osa-u.5   4341860   polyubiquitin 
 osa-u.5   9272016   polyubiquitin 
 osa-u.5   4328390   polyubiquitin 
 zma-u.5   542322   polyubiquitin 
 zma-u.5   100282068   uncharacterized LOC100282068 
 zma-u.5   103626648   polyubiquitin 
 tae-r.2   123166192   polyubiquitin 
 tae-r.2   123136437   polyubiquitin 11 
 tae-r.2   123132200   polyubiquitin 
 hvu-r.1   123406997   polyubiquitin 
 hvu-r.1   123404241   polyubiquitin-like 
 hvu-r.1   123401361   polyubiquitin 11 
 sbi-r.1   110430987   polyubiquitin 
 sbi-r.1   110430698   polyubiquitin 
 sbi-r.1   8079792   polyubiquitin 
 bdi-r.1   100831055   polyubiquitin 
 bdi-r.1   104581271   polyubiquitin 3 
 bdi-r.1   104585556   polyubiquitin 
 cre-r.1   CHLRE_11g467567v5   uncharacterized protein 

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Top 50 coexpressed genes to UBQ11 (ath-m.9 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to UBQ11 (ath-m.9 coexpression data)

CoexMap"825847"


athUBQ11 | Entrez gene ID : 825847    
Species ath bra bna ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 10 3 3 3 3 3 2 2 3 3 3 3 3 3 3 3 3 3 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG ath04120 [list] [network] Ubiquitin mediated proteolysis (162 genes)
GO BP
GO:0006511 [list] [network] ubiquitin-dependent protein catabolic process  (219 genes)  ISS  
GO CC
GO:0005829 [list] [network] cytosol  (2593 genes)  HDA  
GO:0005622 [list] [network] intracellular anatomical structure  (21227 genes)  TAS  
GO MF
GO:0003729 [list] [network] mRNA binding  (1514 genes)  IDA  
Protein NP_001031585.1 [sequence] [blastp]
NP_001118936.1 [sequence] [blastp]
NP_001190681.1 [sequence] [blastp]
NP_567286.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 5,  cyto_nucl 4,  chlo 2,  mito 1,  pero 1  (predict for NP_001031585.1)
cyto 5,  cyto_nucl 4,  chlo 2,  mito 1,  pero 1  (predict for NP_001118936.1)
cyto 5,  cyto_nucl 4,  chlo 2,  mito 1,  pero 1  (predict for NP_001190681.1)
cyto 5,  cyto_nucl 4,  chlo 2,  mito 1,  pero 1  (predict for NP_567286.1)
Subcellular
localization
TargetP
other 8  (predict for NP_001031585.1)
other 8  (predict for NP_001118936.1)
other 8  (predict for NP_001190681.1)
other 8  (predict for NP_567286.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-m.9
for
UBQ11
ath-u.5
for
UBQ11
ath-r.7
for
UBQ11
ath-e.2
for
UBQ11
ath-m.4.bio
for
UBQ11
ath-m.4.hor
for
UBQ11
ath-m.4.lig
for
UBQ11
ath-m.4.str
for
UBQ11
ath-m.4.tis
for
UBQ11
ath-u.5
for
UBQ13
bra-r.6
for
103834437
bra-r.6
for
103838224
bra-r.6
for
103839752
bna-r.1
for
106348160
bna-r.1
for
125588929
bna-r.1
for
106347129
ghi-r.1
for
107925174
ghi-r.1
for
107922157
ghi-r.1
for
107899654
cit-r.1
for
102627936
cit-r.1
for
102609575
cit-r.1
for
102622806
gma-u.5
for
100800638
gma-u.5
for
100819694
gma-u.5
for
100817214
vvi-u.5
for
100267431
vvi-u.5
for
100252768
ppo-u.5
for
7485436
ppo-u.5
for
7454416
mtr-u.5
for
25492931
mtr-u.5
for
25502891
mtr-u.5
for
11422346
sly-u.5
for
101256039
sly-u.5
for
ubq1-1
sly-u.5
for
101258282
sot-r.1
for
102599865
sot-r.1
for
102587932
sot-r.1
for
102586619
nta-r.1
for
107761578
nta-r.1
for
107762509
nta-r.1
for
107766655
osa-u.5
for
4341860
osa-u.5
for
9272016
osa-u.5
for
4328390
zma-u.5
for
542322
zma-u.5
for
100282068
zma-u.5
for
103626648
tae-r.2
for
123166192
tae-r.2
for
123136437
tae-r.2
for
123132200
hvu-r.1
for
123406997
hvu-r.1
for
123404241
hvu-r.1
for
123401361
sbi-r.1
for
110430987
sbi-r.1
for
110430698
sbi-r.1
for
8079792
bdi-r.1
for
100831055
bdi-r.1
for
104581271
bdi-r.1
for
104585556
cre-r.1
for
CHLRE_11g467567v5


Ortholog ID: 257
Species ath ath ath bra bra bra bna bna bna ghi ghi ghi cit cit cit gma gma gma vvi vvi vvi ppo ppo ppo mtr mtr mtr sly sly sly sot sot sot nta nta nta osa osa osa zma zma zma tae tae tae hvu hvu sbi sbi sbi bdi bdi bdi cre
Symbol UBQ13 UBQ3 UBQ10 LOC103838224 LOC103839752 LOC103839755 LOC106372626 LOC106349084 LOC106369026 LOC107899654 LOC107919923 LOC107918137 LOC102627936 LOC102622806 LOC102629380 LOC100817214 SUBI-2 LOC100791065 LOC100267431 LOC100252768 LOC100259635 LOC7480065 LOC7479088 LOC18095912 LOC11431263 LOC11421243 LOC25501783 LOC101256039 ubq1-1 LOC101258282 LOC102599865 LOC102587932 LOC102586619 LOC107788853 LOC107782949 LOC107786552 LOC4341860 LOC4328390 LOC4337080 LOC542322 LOC100282068 LOC103626648 LOC123143946 LOC123143945 LOC123143944 LOC123401278 LOC123406377 LOC110430987 LOC8063786 LOC8076096 LOC100831055 LOC104581271 LOC104585556 CHLRE_11g467567v5
Function* ubiquitin 13 polyubiquitin 3 polyubiquitin 10 polyubiquitin polyubiquitin 11 polyubiquitin polyubiquitin polyubiquitin 11 polyubiquitin polyubiquitin polyubiquitin polyubiquitin uncharacterized LOC102627936 polyubiquitin-like polyubiquitin polyubiquitin polyubiquitin polyubiquitin polyubiquitin polyubiquitin 4 uncharacterized LOC100259635 polyubiquitin polyubiquitin 11 polyubiquitin polyubiquitin 11 polyubiquitin polyubiquitin 4 polyubiquitin ubiquitin polyubiquitin polyubiquitin polyubiquitin polyubiquitin-like polyubiquitin polyubiquitin polyubiquitin polyubiquitin polyubiquitin polyubiquitin 3-like polyubiquitin uncharacterized LOC100282068 polyubiquitin polyubiquitin 11 polyubiquitin 11 polyubiquitin polyubiquitin polyubiquitin polyubiquitin polyubiquitin polyubiquitin polyubiquitin polyubiquitin 3 polyubiquitin uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04120 Ubiquitin mediated proteolysis 3
ath03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04120 Ubiquitin mediated proteolysis 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04120 Ubiquitin mediated proteolysis 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04120 Ubiquitin mediated proteolysis 3
bra04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04120 Ubiquitin mediated proteolysis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04120 Ubiquitin mediated proteolysis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04120 Ubiquitin mediated proteolysis 5
bna00270 Cysteine and methionine metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04120 Ubiquitin mediated proteolysis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04120 Ubiquitin mediated proteolysis 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04120 Ubiquitin mediated proteolysis 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04120 Ubiquitin mediated proteolysis 5
ghi00071 Fatty acid degradation 2
ghi00280 Valine, leucine and isoleucine degradation 2
ghi00310 Lysine degradation 2
ghi00360 Phenylalanine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04141 Protein processing in endoplasmic reticulum 4
ghi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04120 Ubiquitin mediated proteolysis 2
cit04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04120 Ubiquitin mediated proteolysis 7
gma04141 Protein processing in endoplasmic reticulum 6
gma03040 Spliceosome 3
gma04144 Endocytosis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04120 Ubiquitin mediated proteolysis 6
gma04141 Protein processing in endoplasmic reticulum 4
gma03040 Spliceosome 3
gma04144 Endocytosis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04120 Ubiquitin mediated proteolysis 3
gma03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04120 Ubiquitin mediated proteolysis 4
vvi00500 Starch and sucrose metabolism 2
vvi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04120 Ubiquitin mediated proteolysis 4
vvi04141 Protein processing in endoplasmic reticulum 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04120 Ubiquitin mediated proteolysis 4
vvi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04120 Ubiquitin mediated proteolysis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00500 Starch and sucrose metabolism 2
ppo00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
ppo00350 Tyrosine metabolism 2
ppo00360 Phenylalanine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04120 Ubiquitin mediated proteolysis 3
ppo00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04141 Protein processing in endoplasmic reticulum 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04120 Ubiquitin mediated proteolysis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04120 Ubiquitin mediated proteolysis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04130 SNARE interactions in vesicular transport 2
sly04120 Ubiquitin mediated proteolysis 2
sly04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04141 Protein processing in endoplasmic reticulum 2
sly04120 Ubiquitin mediated proteolysis 2
sly03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04141 Protein processing in endoplasmic reticulum 2
sot03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04144 Endocytosis 2
sot04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04120 Ubiquitin mediated proteolysis 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04120 Ubiquitin mediated proteolysis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04120 Ubiquitin mediated proteolysis 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04144 Endocytosis 3
osa04120 Ubiquitin mediated proteolysis 3
osa03272 Virion - Hepatitis viruses 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04120 Ubiquitin mediated proteolysis 3
osa04141 Protein processing in endoplasmic reticulum 2
osa03015 mRNA surveillance pathway 2
osa03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00250 Alanine, aspartate and glutamate metabolism 2
osa00520 Amino sugar and nucleotide sugar metabolism 2
osa01250 Biosynthesis of nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04120 Ubiquitin mediated proteolysis 3
zma04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04120 Ubiquitin mediated proteolysis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04120 Ubiquitin mediated proteolysis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04120 Ubiquitin mediated proteolysis 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04120 Ubiquitin mediated proteolysis 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04120 Ubiquitin mediated proteolysis 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04120 Ubiquitin mediated proteolysis 8
hvu00270 Cysteine and methionine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04120 Ubiquitin mediated proteolysis 7
hvu00940 Phenylpropanoid biosynthesis 3
hvu00250 Alanine, aspartate and glutamate metabolism 2
hvu00460 Cyanoamino acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04120 Ubiquitin mediated proteolysis 5
sbi00030 Pentose phosphate pathway 2
sbi01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04120 Ubiquitin mediated proteolysis 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04120 Ubiquitin mediated proteolysis 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04120 Ubiquitin mediated proteolysis 9
bdi03010 Ribosome 3
bdi03083 Polycomb repressive complex 2
bdi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04120 Ubiquitin mediated proteolysis 5
bdi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04120 Ubiquitin mediated proteolysis 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03010 Ribosome 4
cre04120 Ubiquitin mediated proteolysis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 842845 831899 825880 103838224 103839752 103839755 106372626 106349084 106369026 107899654 107919923 107918137 102627936 102622806 102629380 100817214 114515510 100791065 100267431 100252768 100259635 7480065 7479088 18095912 11431263 11421243 25501783 101256039 101267758 101258282 102599865 102587932 102586619 107788853 107782949 107786552 4341860 4328390 4337080 542322 100282068 103626648 123143946 123143945 123143944 123401278 123406377 110430987 8063786 8076096 100831055 104581271 104585556 5726921
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