ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
mtr-u.5	25502891	polyubiquitin 11
mtr-r.5	25502891	polyubiquitin 11
mtr-u.5	25493109	polyubiquitin-A-like
mtr-u.5	11443904	polyubiquitin
mtr-u.5	25501783	polyubiquitin 4
gma-u.5	100817214	polyubiquitin
gma-u.5	100815545	polyubiquitin 3
gma-u.5	100800638	polyubiquitin 11
ppo-u.5	7480065	polyubiquitin
ppo-u.5	18106976	polyubiquitin
ppo-u.5	7479088	polyubiquitin 11
ath-u.5	UBQ13	ubiquitin 13
vvi-u.5	100267431	polyubiquitin
vvi-u.5	104877307	polyubiquitin
sly-u.5	101256039	polyubiquitin
sly-u.5	ubq1-1	ubiquitin
sly-u.5	101258282	polyubiquitin
osa-u.5	4337080	polyubiquitin 3-like
osa-u.5	9272016	polyubiquitin
osa-u.5	4341860	polyubiquitin
zma-u.5	542322	polyubiquitin
zma-u.5	103626648	polyubiquitin
zma-u.5	100282068	uncharacterized LOC100282068

Top 50 coexpressed genes to 25502891 (mtr-u.5 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 25502891 (mtr-u.5 coexpression data)

CoexMap"25502891"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO CC

GO MF

GO:0005515 [list] [network] protein binding

(5045 genes)

IEA

Protein

XP_039685091.1 [sequence] [blastp]

Subcellular
localization
wolf

cyto 4, cyto_nucl 4, cyto_E.R. 3, E.R. 1, chlo 1, mito 1, extr 1, pero 1, chlo_mito 1

(predict for XP_039685091.1)

Subcellular
localization
TargetP

other 7, scret 3

(predict for XP_039685091.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target		Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	mtr-u.5 for 25502891	mtr-r.5 for 25502891	mtr-u.5 for 25493109	mtr-u.5 for 11443904	mtr-u.5 for 25501783	gma-u.5 for 100817214	gma-u.5 for 100815545	gma-u.5 for 100800638	ppo-u.5 for 7480065	ppo-u.5 for 18106976	ppo-u.5 for 7479088	ath-u.5 for UBQ13	vvi-u.5 for 100267431	vvi-u.5 for 104877307	sly-u.5 for 101256039	sly-u.5 for ubq1-1	sly-u.5 for 101258282	osa-u.5 for 4337080	osa-u.5 for 9272016	osa-u.5 for 4341860	zma-u.5 for 542322	zma-u.5 for 103626648	zma-u.5 for 100282068

Ortholog

Ortholog ID: 257

Species

mtr

gma

ppo

ath

bra

vvi

ghi

bna

cit

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

cre

Symbol

SUBI-2

UBQ10

UBQ13

ubq1-1

Function^*

polyubiquitin

polyubiquitin 4

polyubiquitin

polyubiquitin 10

ubiquitin 13

polyubiquitin 11

polyubiquitin

uncharacterized LOC100259635

polyubiquitin 4

polyubiquitin

polyubiquitin-like

polyubiquitin

ubiquitin

polyubiquitin

polyubiquitin 3-like

polyubiquitin

polyubiquitin 11

polyubiquitin

uncharacterized protein

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr04120	Ubiquitin mediated proteolysis	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr04120	Ubiquitin mediated proteolysis	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04120	Ubiquitin mediated proteolysis	3
gma03050	Proteasome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04120	Ubiquitin mediated proteolysis	6
gma04141	Protein processing in endoplasmic reticulum	4
gma03040	Spliceosome	3
gma04144	Endocytosis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04120	Ubiquitin mediated proteolysis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04120	Ubiquitin mediated proteolysis	3
ppo00190	Oxidative phosphorylation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04120	Ubiquitin mediated proteolysis	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04120	Ubiquitin mediated proteolysis	3
ath03010	Ribosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04120	Ubiquitin mediated proteolysis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04120	Ubiquitin mediated proteolysis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi04120	Ubiquitin mediated proteolysis	4
vvi04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi04120	Ubiquitin mediated proteolysis	4
vvi04141	Protein processing in endoplasmic reticulum	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04120	Ubiquitin mediated proteolysis	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04120	Ubiquitin mediated proteolysis	5
ghi00071	Fatty acid degradation	2
ghi00280	Valine, leucine and isoleucine degradation	2
ghi00310	Lysine degradation	2
ghi00360	Phenylalanine metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna04120	Ubiquitin mediated proteolysis	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna04120	Ubiquitin mediated proteolysis	5
bna00270	Cysteine and methionine metabolism	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly04141	Protein processing in endoplasmic reticulum	2
sly04120	Ubiquitin mediated proteolysis	2
sly03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly04130	SNARE interactions in vesicular transport	2
sly04120	Ubiquitin mediated proteolysis	2
sly04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot04141	Protein processing in endoplasmic reticulum	2
sot03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04120	Ubiquitin mediated proteolysis	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04120	Ubiquitin mediated proteolysis	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa04144	Endocytosis	3
osa04120	Ubiquitin mediated proteolysis	3
osa03272	Virion - Hepatitis viruses	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa00250	Alanine, aspartate and glutamate metabolism	2
osa00520	Amino sugar and nucleotide sugar metabolism	2
osa01250	Biosynthesis of nucleotide sugars	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04120	Ubiquitin mediated proteolysis	3
zma04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04120	Ubiquitin mediated proteolysis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04120	Ubiquitin mediated proteolysis	8

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04120	Ubiquitin mediated proteolysis	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu04120	Ubiquitin mediated proteolysis	7
hvu00940	Phenylpropanoid biosynthesis	3
hvu00250	Alanine, aspartate and glutamate metabolism	2
hvu00460	Cyanoamino acid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu04120	Ubiquitin mediated proteolysis	8
hvu00270	Cysteine and methionine metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi04120	Ubiquitin mediated proteolysis	5
sbi00030	Pentose phosphate pathway	2
sbi01200	Carbon metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi04120	Ubiquitin mediated proteolysis	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi04120	Ubiquitin mediated proteolysis	9
bdi03010	Ribosome	3
bdi03083	Polycomb repressive complex	2
bdi04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi04120	Ubiquitin mediated proteolysis	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cre03010	Ribosome	4
cre04120	Ubiquitin mediated proteolysis	2

Expression

Expression pattern

Entrez Gene ID^*

11421243

25501783

100791065

114515510

7480065

18095912

825880

842845

103839752

103839755

100259635

100252768

107899654

107919923

106369026

106372626

102629380

102622806

101258282

101267758

102587932

102599865

107782949

107788853

4341860

4337080

542322

103626648

123143944

123143945

123406377

123401278

110430987

8063786

100831055

104585556

5726921

The preparation time of this page was 0.2 [sec].


Species	mtr	gma	ppo	ath	vvi	sly	osa	zma	bdi	hvu	bra	cit	bna	sbi	ghi	sot	nta	cre	tae
Paralog	5	3	3	1	2	3	3	3	0	0	0	0	0	0	0	0	0	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 25502891 (mtr-u.5 coexpression data)

Top 50 enrichment test to 25502891 (mtr-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**