Select Species**


OK


Orthologous genes in OrthoFinder**

Species Gene Description
 ath-m.9   RH39   RH39 
 ath-u.5   RH39   RH39 
 ath-r.7   RH39   RH39 
 ath-e.2   RH39   RH39 
 ath-m.4.bio   RH39   RH39 
 ath-m.4.hor   RH39   RH39 
 ath-m.4.lig   RH39   RH39 
 ath-m.4.str   RH39   RH39 
 ath-m.4.tis   RH39   RH39 
 bra-r.6   103858536   DEAD-box ATP-dependent RNA helicase 39 
 bra-r.6   103838871   DEAD-box ATP-dependent RNA helicase 39 
 bna-r.1   106416672   DEAD-box ATP-dependent RNA helicase 47A 
 bna-r.1   106423545   DEAD-box ATP-dependent RNA helicase 39 
 bna-r.1   106438498   DEAD-box ATP-dependent RNA helicase 39 
 ghi-r.1   107901756   DEAD-box ATP-dependent RNA helicase 39 
 ghi-r.1   107962311   DEAD-box ATP-dependent RNA helicase 39 
 cit-r.1   102611560   DEAD-box ATP-dependent RNA helicase 39-like 
 gma-u.5   100805709   DEAD-box ATP-dependent RNA helicase 39 
 vvi-u.5   100247785   DEAD-box ATP-dependent RNA helicase 39 
 ppo-u.5   7464782   DEAD-box ATP-dependent RNA helicase 39 
 mtr-u.5   25496263   DEAD-box ATP-dependent RNA helicase 39 
 sly-u.5   RES   DEAD-box ATP-dependent RNA helicase 39 
 nta-r.1   107794547   DEAD-box ATP-dependent RNA helicase 39 
 nta-r.1   107823954   DEAD-box ATP-dependent RNA helicase 39 
 osa-u.5   4325344   DEAD-box ATP-dependent RNA helicase 39-like 
 zma-u.5   100191518   uncharacterized LOC100191518 
 tae-r.2   123077481   DEAD-box ATP-dependent RNA helicase 39 
 tae-r.2   123068942   DEAD-box ATP-dependent RNA helicase 39 
 tae-r.2   123060414   DEAD-box ATP-dependent RNA helicase 39 
 hvu-r.1   123442935   DEAD-box ATP-dependent RNA helicase 39 
 sbi-r.1   8078753   DEAD-box ATP-dependent RNA helicase 39 
 bdi-r.1   100840295   DEAD-box ATP-dependent RNA helicase 39 
 cre-r.1   CHLRE_01g033832v5   uncharacterized protein 

close


Top 50 coexpressed genes to RH39 (ath-m.9 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

close

close

Top 50 enrichment test to RH39 (ath-m.9 coexpression data)

CoexMap"826559"


athRH39 | Entrez gene ID : 826559      
Species ath bra bna ghi cit gma vvi ppo mtr sly nta osa zma tae hvu sbi bdi cre sot
Paralog 9 2 3 2 1 1 1 1 1 1 2 1 1 3 1 1 1 1 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0110102 [list] [network] ribulose bisphosphate carboxylase complex assembly  (7 genes)  IMP  
GO:1901259 [list] [network] chloroplast rRNA processing  (15 genes)  IMP  
GO CC
GO:0009507 [list] [network] chloroplast  (5014 genes)  HDA IMP  
GO MF
GO:0070180 [list] [network] large ribosomal subunit rRNA binding  (1 genes)  IDA  
GO:0003724 [list] [network] RNA helicase activity  (42 genes)  IEA  
GO:0016887 [list] [network] ATP hydrolysis activity  (205 genes)  IDA  
GO:0003729 [list] [network] mRNA binding  (1514 genes)  IDA  
Protein NP_849348.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 7,  nucl 2  (predict for NP_849348.1)
Subcellular
localization
TargetP
mito 3  (predict for NP_849348.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-m.9
for
RH39
ath-u.5
for
RH39
ath-r.7
for
RH39
ath-e.2
for
RH39
ath-m.4.bio
for
RH39
ath-m.4.hor
for
RH39
ath-m.4.lig
for
RH39
ath-m.4.str
for
RH39
ath-m.4.tis
for
RH39
bra-r.6
for
103858536
bra-r.6
for
103838871
bna-r.1
for
106416672
bna-r.1
for
106423545
bna-r.1
for
106438498
ghi-r.1
for
107901756
ghi-r.1
for
107962311
cit-r.1
for
102611560
gma-u.5
for
100805709
vvi-u.5
for
100247785
ppo-u.5
for
7464782
mtr-u.5
for
25496263
sly-u.5
for
RES
nta-r.1
for
107794547
nta-r.1
for
107823954
osa-u.5
for
4325344
zma-u.5
for
100191518
tae-r.2
for
123077481
tae-r.2
for
123068942
tae-r.2
for
123060414
hvu-r.1
for
123442935
sbi-r.1
for
8078753
bdi-r.1
for
100840295
cre-r.1
for
CHLRE_01g033832v5


Ortholog ID: 10175
Species ath bra bra bna bna bna ghi ghi cit gma vvi ppo mtr sly nta nta osa zma tae tae tae hvu sbi bdi cre
Symbol RH39 LOC103858536 LOC103838871 LOC106416672 LOC106423545 LOC106438498 LOC107901756 LOC107962311 LOC102611560 LOC100805709 LOC100247785 LOC7464782 LOC25496263 RES LOC107794547 LOC107823954 LOC4325344 LOC100191518 LOC123077481 LOC123068942 LOC123060414 LOC123442935 LOC8078753 LOC100840295 CHLRE_01g033832v5
Function* RH39 DEAD-box ATP-dependent RNA helicase 39 DEAD-box ATP-dependent RNA helicase 39 DEAD-box ATP-dependent RNA helicase 47A DEAD-box ATP-dependent RNA helicase 39 DEAD-box ATP-dependent RNA helicase 39 DEAD-box ATP-dependent RNA helicase 39 DEAD-box ATP-dependent RNA helicase 39 DEAD-box ATP-dependent RNA helicase 39-like DEAD-box ATP-dependent RNA helicase 39 DEAD-box ATP-dependent RNA helicase 39 DEAD-box ATP-dependent RNA helicase 39 DEAD-box ATP-dependent RNA helicase 39 DEAD-box ATP-dependent RNA helicase 39 DEAD-box ATP-dependent RNA helicase 39 DEAD-box ATP-dependent RNA helicase 39 DEAD-box ATP-dependent RNA helicase 39-like uncharacterized LOC100191518 DEAD-box ATP-dependent RNA helicase 39 DEAD-box ATP-dependent RNA helicase 39 DEAD-box ATP-dependent RNA helicase 39 DEAD-box ATP-dependent RNA helicase 39 DEAD-box ATP-dependent RNA helicase 39 DEAD-box ATP-dependent RNA helicase 39 uncharacterized protein
Coexmap

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
Coexpression

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03018 RNA degradation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03018 RNA degradation 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03018 RNA degradation 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04141 Protein processing in endoplasmic reticulum 2
sly03018 RNA degradation 2
sly01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03030 DNA replication 3
nta03410 Base excision repair 3
nta03420 Nucleotide excision repair 3
nta03440 Homologous recombination 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00740 Riboflavin metabolism 2
tae01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03018 RNA degradation 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu01240 Biosynthesis of cofactors 3
hvu00970 Aminoacyl-tRNA biosynthesis 2
hvu03018 RNA degradation 2
hvu00860 Porphyrin metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 826559 103858536 103838871 106416672 106423545 106438498 107901756 107962311 102611560 100805709 100247785 7464782 25496263 101257152 107794547 107823954 4325344 100191518 123077481 123068942 123060414 123442935 8078753 100840295 5715429
The preparation time of this page was 0.1 [sec].