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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-m.9   AT4G01240   S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 
 ath-u.5   AT4G01240   S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 
 ath-r.7   AT4G01240   S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 
 ath-e.2   AT4G01240   S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 
 ath-m.4.bio   AT4G01240   S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 
 ath-m.4.hor   AT4G01240   S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 
 ath-m.4.lig   AT4G01240   S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 
 ath-m.4.str   AT4G01240   S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 
 ath-m.4.tis   AT4G01240   S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 
 ghi-r.1   107887327   probable methyltransferase At1g29790 
 ghi-r.1   107900920   probable methyltransferase At1g29790 
 gma-u.5   100809058   probable methyltransferase At1g29790 
 vvi-u.5   100263595   uncharacterized LOC100263595 
 mtr-u.5   25500808   uncharacterized LOC25500808 
 nta-r.1   107814448   uncharacterized LOC107814448 
 nta-r.1   107790062   uncharacterized LOC107790062 

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Top 50 coexpressed genes to AT4G01240 (ath-m.9 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to AT4G01240 (ath-m.9 coexpression data)

CoexMap"827909"


athAT4G01240 | Entrez gene ID : 827909      
Species ath ghi gma vvi mtr nta hvu sot bdi sly osa tae bna ppo zma cre sbi bra cit
Paralog 9 2 1 1 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO:0005634 [list] [network] nucleus  (10367 genes)  ISM  
GO MF
Protein NP_192033.1 [sequence] [blastp]
Subcellular
localization
wolf
E.R. 4,  nucl 1,  plas 1,  nucl_plas 1,  chlo 1,  cyto 1,  vacu 1,  pero 1,  cysk_nucl 1,  golg_plas 1,  cyto_pero 1,  cysk_plas 1,  mito_plas 1  (predict for NP_192033.1)
Subcellular
localization
TargetP
other 7  (predict for NP_192033.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-m.9
for
AT4G01240
ath-u.5
for
AT4G01240
ath-r.7
for
AT4G01240
ath-e.2
for
AT4G01240
ath-m.4.bio
for
AT4G01240
ath-m.4.hor
for
AT4G01240
ath-m.4.lig
for
AT4G01240
ath-m.4.str
for
AT4G01240
ath-m.4.tis
for
AT4G01240
ghi-r.1
for
107887327
ghi-r.1
for
107900920
gma-u.5
for
100809058
vvi-u.5
for
100263595
mtr-u.5
for
25500808
nta-r.1
for
107814448
nta-r.1
for
107790062


Ortholog ID: 12915
Species ath ghi ghi gma vvi mtr nta nta
Symbol AT4G01240 LOC107887327 LOC107900920 LOC100809058 LOC100263595 LOC25500808 LOC107814448 LOC107790062
Function* S-adenosyl-L-methionine-dependent methyltransferases superfamily protein probable methyltransferase At1g29790 probable methyltransferase At1g29790 probable methyltransferase At1g29790 uncharacterized LOC100263595 uncharacterized LOC25500808 uncharacterized LOC107814448 uncharacterized LOC107790062
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta01240 Biosynthesis of cofactors 6
nta00750 Vitamin B6 metabolism 2
nta00790 Folate biosynthesis 2
nta00010 Glycolysis / Gluconeogenesis 2
nta00020 Citrate cycle (TCA cycle) 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04016 MAPK signaling pathway - plant 2
nta04075 Plant hormone signal transduction 2
nta04144 Endocytosis 2
nta04145 Phagosome 2
nta04148 Efferocytosis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 827909 107887327 107900920 100809058 100263595 25500808 107814448 107790062
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