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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-m.9   PRL   Minichromosome maintenance (MCM2/3/5) family protein 
 ath-u.5   PRL   Minichromosome maintenance (MCM2/3/5) family protein 
 ath-r.7   PRL   Minichromosome maintenance (MCM2/3/5) family protein 
 ath-e.2   PRL   Minichromosome maintenance (MCM2/3/5) family protein 
 ath-m.4.bio   PRL   Minichromosome maintenance (MCM2/3/5) family protein 
 ath-m.4.hor   PRL   Minichromosome maintenance (MCM2/3/5) family protein 
 ath-m.4.lig   PRL   Minichromosome maintenance (MCM2/3/5) family protein 
 ath-m.4.str   PRL   Minichromosome maintenance (MCM2/3/5) family protein 
 ath-m.4.tis   PRL   Minichromosome maintenance (MCM2/3/5) family protein 
 bra-r.6   103858780   DNA replication licensing factor MCM7 
 bra-r.6   103836781   DNA replication licensing factor MCM7 
 bna-r.1   106435589   DNA replication licensing factor MCM7 
 bna-r.1   106388802   DNA replication licensing factor MCM7 
 bna-r.1   106426657   DNA replication licensing factor MCM7 
 ghi-r.1   107924650   DNA replication licensing factor MCM7 
 ghi-r.1   107912324   DNA replication licensing factor MCM7 
 cit-r.1   102629070   DNA replication licensing factor MCM7 
 gma-u.5   100811639   DNA replication licensing factor MCM7 
 gma-u.5   100802903   DNA replication licensing factor MCM7 
 vvi-u.5   100267599   DNA replication licensing factor MCM7 
 ppo-u.5   7491255   DNA replication licensing factor MCM7 
 mtr-u.5   11430699   DNA replication licensing factor MCM7 
 sly-u.5   101243636   DNA replication licensing factor MCM7-like protein 
 sot-r.1   102601493   DNA replication licensing factor MCM7 
 nta-r.1   107774668   DNA replication licensing factor MCM7-like 
 nta-r.1   107795499   DNA replication licensing factor MCM7 
 osa-u.5   4352514   DNA replication licensing factor MCM7-like 
 zma-u.5   542504   replication licensing factor MCM7 homologue 
 zma-u.5   100273978   uncharacterized LOC100273978 
 tae-r.2   123119761   DNA replication licensing factor MCM7 
 tae-r.2   123110760   DNA replication licensing factor MCM7 
 tae-r.2   123102571   DNA replication licensing factor MCM7 
 hvu-r.1   123452333   DNA replication licensing factor MCM7 
 sbi-r.1   8066367   DNA replication licensing factor MCM7 
 bdi-r.1   100834667   DNA replication licensing factor MCM7 
 cre-r.1   CHLRE_10g455850v5   uncharacterized protein 

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Top 50 coexpressed genes to PRL (ath-m.9 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to PRL (ath-m.9 coexpression data)

CoexMap"828153"


athPRL | Entrez gene ID : 828153      
Species ath bra bna ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 9 2 3 2 1 2 1 1 1 1 1 2 1 2 3 1 1 1 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG ath03030 [list] [network] DNA replication (43 genes)
GO BP
GO:0090329 [list] [network] regulation of DNA-templated DNA replication  (38 genes)  IPI  
GO:0010182 [list] [network] sugar mediated signaling pathway  (40 genes)  TAS  
GO:0009555 [list] [network] pollen development  (385 genes)  IMP  
GO:0009790 [list] [network] embryo development  (598 genes)  IMP  
GO CC
GO:0000347 [list] [network] THO complex  (14 genes)  IDA  
GO:0000785 [list] [network] chromatin  (140 genes)  IDA  
GO:0005829 [list] [network] cytosol  (2593 genes)  RCA  
GO:0005634 [list] [network] nucleus  (10367 genes)  IDA ISM  
GO:0005737 [list] [network] cytoplasm  (14000 genes)  IDA  
GO MF
GO:0005515 [list] [network] protein binding  (5363 genes)  IPI  
Protein NP_001190655.1 [sequence] [blastp]
NP_192115.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 5,  chlo 1,  nucl 1,  mito 1,  plas 1,  vacu 1,  E.R. 1,  nucl_plas 1,  E.R._vacu 1,  E.R._plas 1,  mito_plas 1  (predict for NP_001190655.1)
cyto 5,  chlo 1,  nucl 1,  mito 1,  plas 1,  vacu 1,  E.R. 1,  nucl_plas 1,  E.R._vacu 1,  E.R._plas 1,  mito_plas 1  (predict for NP_192115.1)
Subcellular
localization
TargetP
other 8  (predict for NP_001190655.1)
other 8  (predict for NP_192115.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-m.9
for
PRL
ath-u.5
for
PRL
ath-r.7
for
PRL
ath-e.2
for
PRL
ath-m.4.bio
for
PRL
ath-m.4.hor
for
PRL
ath-m.4.lig
for
PRL
ath-m.4.str
for
PRL
ath-m.4.tis
for
PRL
bra-r.6
for
103858780
bra-r.6
for
103836781
bna-r.1
for
106435589
bna-r.1
for
106388802
bna-r.1
for
106426657
ghi-r.1
for
107924650
ghi-r.1
for
107912324
cit-r.1
for
102629070
gma-u.5
for
100811639
gma-u.5
for
100802903
vvi-u.5
for
100267599
ppo-u.5
for
7491255
mtr-u.5
for
11430699
sly-u.5
for
101243636
sot-r.1
for
102601493
nta-r.1
for
107774668
nta-r.1
for
107795499
osa-u.5
for
4352514
zma-u.5
for
542504
zma-u.5
for
100273978
tae-r.2
for
123119761
tae-r.2
for
123110760
tae-r.2
for
123102571
hvu-r.1
for
123452333
sbi-r.1
for
8066367
bdi-r.1
for
100834667
cre-r.1
for
CHLRE_10g455850v5


Ortholog ID: 8093
Species ath bra bra bna bna bna ghi ghi cit gma gma vvi ppo mtr sly sot nta nta osa zma zma tae tae tae hvu sbi bdi cre
Symbol PRL LOC103858780 LOC103836781 LOC106435589 LOC106426657 LOC106438659 LOC107924650 LOC107912324 LOC102629070 LOC100811639 LOC100802903 LOC100267599 LOC7491255 LOC11430699 LOC101243636 LOC102601493 LOC107774668 LOC107795499 LOC4352514 LOC542504 LOC100273978 LOC123119761 LOC123110760 LOC123102571 LOC123452333 LOC8066367 LOC100834667 CHLRE_10g455850v5
Function* Minichromosome maintenance (MCM2/3/5) family protein DNA replication licensing factor MCM7 DNA replication licensing factor MCM7 DNA replication licensing factor MCM7 DNA replication licensing factor MCM7 DNA replication licensing factor MCM7 DNA replication licensing factor MCM7 DNA replication licensing factor MCM7 DNA replication licensing factor MCM7 DNA replication licensing factor MCM7 DNA replication licensing factor MCM7 DNA replication licensing factor MCM7 DNA replication licensing factor MCM7 DNA replication licensing factor MCM7 DNA replication licensing factor MCM7-like protein DNA replication licensing factor MCM7 DNA replication licensing factor MCM7-like DNA replication licensing factor MCM7 DNA replication licensing factor MCM7-like replication licensing factor MCM7 homologue uncharacterized LOC100273978 DNA replication licensing factor MCM7 DNA replication licensing factor MCM7 DNA replication licensing factor MCM7 DNA replication licensing factor MCM7 DNA replication licensing factor MCM7 DNA replication licensing factor MCM7 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03030 DNA replication 12
ath03410 Base excision repair 2
ath03420 Nucleotide excision repair 2
ath03430 Mismatch repair 2
ath00240 Pyrimidine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03030 DNA replication 10
bra00240 Pyrimidine metabolism 2
bra01232 Nucleotide metabolism 2
bra03420 Nucleotide excision repair 2
bra03430 Mismatch repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03030 DNA replication 9
bra03430 Mismatch repair 3
bra00240 Pyrimidine metabolism 2
bra01232 Nucleotide metabolism 2
bra03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03030 DNA replication 8
bna03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03030 DNA replication 6
bna03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03030 DNA replication 8
bna03440 Homologous recombination 5
bna03460 Fanconi anemia pathway 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03030 DNA replication 4
ghi00230 Purine metabolism 4
ghi00240 Pyrimidine metabolism 4
ghi00480 Glutathione metabolism 4
ghi01232 Nucleotide metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00240 Pyrimidine metabolism 6
ghi01232 Nucleotide metabolism 6
ghi03030 DNA replication 4
ghi00230 Purine metabolism 4
ghi00480 Glutathione metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03030 DNA replication 8
cit04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03030 DNA replication 11
gma03430 Mismatch repair 3
gma00240 Pyrimidine metabolism 3
gma01232 Nucleotide metabolism 3
gma03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03030 DNA replication 8
gma00240 Pyrimidine metabolism 2
gma01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03030 DNA replication 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03030 DNA replication 8
ppo03410 Base excision repair 2
ppo03420 Nucleotide excision repair 2
ppo03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03030 DNA replication 11
mtr03420 Nucleotide excision repair 2
mtr03430 Mismatch repair 2
mtr03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03030 DNA replication 10
sly03420 Nucleotide excision repair 2
sly03430 Mismatch repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03030 DNA replication 10
sot03410 Base excision repair 2
sot03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03030 DNA replication 12
nta03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03030 DNA replication 13
nta03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03030 DNA replication 13
osa03420 Nucleotide excision repair 4
osa03430 Mismatch repair 3
osa03440 Homologous recombination 2
osa03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03030 DNA replication 13
zma03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03030 DNA replication 12
zma03420 Nucleotide excision repair 2
zma03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03030 DNA replication 12
tae03430 Mismatch repair 2
tae03420 Nucleotide excision repair 2
tae03440 Homologous recombination 2
tae03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03030 DNA replication 17
tae03420 Nucleotide excision repair 4
tae03430 Mismatch repair 3
tae03440 Homologous recombination 3
tae03460 Fanconi anemia pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03030 DNA replication 12
tae03410 Base excision repair 2
tae03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03030 DNA replication 5
hvu03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03030 DNA replication 13
sbi03420 Nucleotide excision repair 3
sbi03440 Homologous recombination 3
sbi03430 Mismatch repair 2
sbi03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03030 DNA replication 10
bdi03440 Homologous recombination 3
bdi03460 Fanconi anemia pathway 3
bdi03420 Nucleotide excision repair 3
bdi03430 Mismatch repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03030 DNA replication 10
cre03410 Base excision repair 3
cre03420 Nucleotide excision repair 3
cre03430 Mismatch repair 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 828153 103858780 103836781 106435589 106426657 106438659 107924650 107912324 102629070 100811639 100802903 100267599 7491255 11430699 101243636 102601493 107774668 107795499 4352514 542504 100273978 123119761 123110760 123102571 123452333 8066367 100834667 5723922
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