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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-m.9   ABCB28   non-intrinsic ABC protein 8 
 ath-u.5   ABCB28   non-intrinsic ABC protein 8 
 ath-r.7   ABCB28   non-intrinsic ABC protein 8 
 ath-e.2   ABCB28   non-intrinsic ABC protein 8 
 ath-m.4.bio   ABCB28   non-intrinsic ABC protein 8 
 ath-m.4.hor   ABCB28   non-intrinsic ABC protein 8 
 ath-m.4.lig   ABCB28   non-intrinsic ABC protein 8 
 ath-m.4.str   ABCB28   non-intrinsic ABC protein 8 
 ath-m.4.tis   ABCB28   non-intrinsic ABC protein 8 
 bra-r.6   103834871   ABC transporter B family member 28 
 bna-r.1   106361330   ABC transporter B family member 28 
 bna-r.1   106426460   ABC transporter B family member 28 
 ghi-r.1   107946793   ABC transporter B family member 28 
 ghi-r.1   107917974   ABC transporter B family member 28 
 cit-r.1   102617635   ABC transporter B family member 28 
 gma-u.5   100791034   ABC transporter B family member 28 
 vvi-u.5   100262436   ABC transporter B family member 28 
 ppo-u.5   7454471   ABC transporter B family member 28 
 mtr-u.5   25497236   ABC transporter B family member 28 
 sly-u.5   ABCB20   ABC transporter B family member 20 
 sot-r.1   102592142   ABC transporter B family member 28 
 nta-r.1   107791508   ABC transporter B family member 28 
 nta-r.1   107770825   ABC transporter B family member 28 
 osa-u.5   4343172   ABC transporter B family member 28 
 zma-u.5   103632317   ABC transporter B family member 28 
 tae-r.2   123165510   ABC transporter B family member 28 
 tae-r.2   123157259   ABC transporter B family member 28 
 tae-r.2   123148233   ABC transporter B family member 28 
 hvu-r.1   123409648   ABC transporter B family member 28 
 sbi-r.1   110432523   ABC transporter B family member 28 
 bdi-r.1   100837760   ABC transporter B family member 28 
 cre-r.1   CHLRE_16g669525v5   uncharacterized protein 

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Top 50 coexpressed genes to ABCB28 (ath-m.9 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to ABCB28 (ath-m.9 coexpression data)

CoexMap"828650"


athABCB28 | Entrez gene ID : 828650      
Species ath bra bna ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 9 1 2 2 1 1 1 1 1 1 1 2 1 1 3 1 1 1 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG ath02010 [list] [network] ABC transporters (68 genes)
GO BP
GO:0055085 [list] [network] transmembrane transport  (543 genes)  IEA  
GO CC
GO:0009941 [list] [network] chloroplast envelope  (585 genes)  HDA  
GO:0005829 [list] [network] cytosol  (2593 genes)  HDA  
GO:0009507 [list] [network] chloroplast  (5014 genes)  HDA  
GO MF
GO:0140359 [list] [network] ABC-type transporter activity  (40 genes)  IEA  
GO:0042626 [list] [network] ATPase-coupled transmembrane transporter activity  (192 genes)  ISS  
GO:0016887 [list] [network] ATP hydrolysis activity  (205 genes)  IEA  
GO:0022857 [list] [network] transmembrane transporter activity  (1015 genes)  ISS  
Protein NP_001031714.1 [sequence] [blastp]
NP_001078446.1 [sequence] [blastp]
NP_194275.2 [sequence] [blastp]
Subcellular
localization
wolf
chlo 8,  mito 1  (predict for NP_001031714.1)
chlo 5,  E.R. 2,  mito 1,  cyto_E.R. 1  (predict for NP_001078446.1)
chlo 8,  mito 1  (predict for NP_194275.2)
Subcellular
localization
TargetP
mito 6,  chlo 5  (predict for NP_001031714.1)
other 4,  mito 4  (predict for NP_001078446.1)
mito 6,  chlo 5  (predict for NP_194275.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-m.9
for
ABCB28
ath-u.5
for
ABCB28
ath-r.7
for
ABCB28
ath-e.2
for
ABCB28
ath-m.4.bio
for
ABCB28
ath-m.4.hor
for
ABCB28
ath-m.4.lig
for
ABCB28
ath-m.4.str
for
ABCB28
ath-m.4.tis
for
ABCB28
bra-r.6
for
103834871
bna-r.1
for
106361330
bna-r.1
for
106426460
ghi-r.1
for
107946793
ghi-r.1
for
107917974
cit-r.1
for
102617635
gma-u.5
for
100791034
vvi-u.5
for
100262436
ppo-u.5
for
7454471
mtr-u.5
for
25497236
sly-u.5
for
ABCB20
sot-r.1
for
102592142
nta-r.1
for
107791508
nta-r.1
for
107770825
osa-u.5
for
4343172
zma-u.5
for
103632317
tae-r.2
for
123165510
tae-r.2
for
123157259
tae-r.2
for
123148233
hvu-r.1
for
123409648
sbi-r.1
for
110432523
bdi-r.1
for
100837760
cre-r.1
for
CHLRE_16g669525v5


Ortholog ID: 10220
Species ath bra bna bna ghi ghi cit gma vvi ppo mtr sly sot nta nta osa zma tae tae tae hvu sbi bdi cre
Symbol ABCB28 LOC103834871 LOC106361330 LOC106426460 LOC107946793 LOC107917974 LOC102617635 LOC100791034 LOC100262436 LOC7454471 LOC25497236 ABCB20 LOC102592142 LOC107791508 LOC107770825 LOC4343172 LOC103632317 LOC123165510 LOC123157259 LOC123148233 LOC123409648 LOC110432523 LOC100837760 CHLRE_16g669525v5
Function* non-intrinsic ABC protein 8 ABC transporter B family member 28 ABC transporter B family member 28 ABC transporter B family member 28 ABC transporter B family member 28 ABC transporter B family member 28 ABC transporter B family member 28 ABC transporter B family member 28 ABC transporter B family member 28 ABC transporter B family member 28 ABC transporter B family member 28 ABC transporter B family member 20 ABC transporter B family member 28 ABC transporter B family member 28 ABC transporter B family member 28 ABC transporter B family member 28 ABC transporter B family member 28 ABC transporter B family member 28 ABC transporter B family member 28 ABC transporter B family member 28 ABC transporter B family member 28 ABC transporter B family member 28 ABC transporter B family member 28 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00561 Glycerolipid metabolism 3
bna00500 Starch and sucrose metabolism 2
bna03060 Protein export 2
bna04016 MAPK signaling pathway - plant 2
bna02010 ABC transporters 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00500 Starch and sucrose metabolism 2
bna03060 Protein export 2
bna04016 MAPK signaling pathway - plant 2
bna02010 ABC transporters 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00240 Pyrimidine metabolism 2
ghi01232 Nucleotide metabolism 2
ghi01240 Biosynthesis of cofactors 2
ghi02010 ABC transporters 2
ghi00750 Vitamin B6 metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00240 Pyrimidine metabolism 2
ghi01232 Nucleotide metabolism 2
ghi01240 Biosynthesis of cofactors 2
ghi02010 ABC transporters 2
ghi00750 Vitamin B6 metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi02010 ABC transporters 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00740 Riboflavin metabolism 6
mtr01240 Biosynthesis of cofactors 6
mtr00790 Folate biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00970 Aminoacyl-tRNA biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00970 Aminoacyl-tRNA biosynthesis 6
nta00130 Ubiquinone and other terpenoid-quinone biosynthesis 3
nta01240 Biosynthesis of cofactors 3
nta00450 Selenocompound metabolism 2
nta02010 ABC transporters 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00970 Aminoacyl-tRNA biosynthesis 6
nta00130 Ubiquinone and other terpenoid-quinone biosynthesis 3
nta01240 Biosynthesis of cofactors 3
nta00450 Selenocompound metabolism 2
nta02010 ABC transporters 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae02010 ABC transporters 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae02010 ABC transporters 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae02010 ABC transporters 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00970 Aminoacyl-tRNA biosynthesis 2
hvu03010 Ribosome 2
hvu03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi01240 Biosynthesis of cofactors 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 828650 103834871 106361330 106426460 107946793 107917974 102617635 100791034 100262436 7454471 25497236 101261891 102592142 107791508 107770825 4343172 103632317 123165510 123157259 123148233 123409648 110432523 100837760 5717705
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