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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-m.9   AT4G32970   BRISC/BRCA1-A complex protein 
 ath-u.5   AT4G32970   BRISC/BRCA1-A complex protein 
 ath-r.7   AT4G32970   BRISC/BRCA1-A complex protein 
 ath-e.2   AT4G32970   BRISC/BRCA1-A complex protein 
 ath-m.4.bio   AT4G32970   BRISC/BRCA1-A complex protein 
 ath-m.4.hor   AT4G32970   BRISC/BRCA1-A complex protein 
 ath-m.4.lig   AT4G32970   BRISC/BRCA1-A complex protein 
 ath-m.4.str   AT4G32970   BRISC/BRCA1-A complex protein 
 ath-m.4.tis   AT4G32970   BRISC/BRCA1-A complex protein 
 ath-u.5   AT4G32960   BRISC/BRCA1-A complex protein 
 bra-r.6   103862208   uncharacterized LOC103862208 
 bna-r.1   BNAC07G44040D   uncharacterized BNAC07G44040D 
 bna-r.1   106423403   uncharacterized LOC106423403 
 ghi-r.1   107906991   uncharacterized LOC107906991 
 ghi-r.1   107941871   uncharacterized LOC107941871 
 cit-r.1   102611871   hypothetical protein 
 gma-u.5   100527612   uncharacterized LOC100527612 
 vvi-u.5   100260976   uncharacterized LOC100260976 
 ppo-u.5   7463711   uncharacterized LOC7463711 
 mtr-u.5   25489640   BRISC and BRCA1-A complex member 1 
 sly-u.5   101267881   uncharacterized LOC101267881 
 sot-r.1   102596388   uncharacterized LOC102596388 
 nta-r.1   107824468   uncharacterized LOC107824468 
 nta-r.1   107779842   uncharacterized LOC107779842 
 nta-r.1   107779572   uncharacterized LOC107779572 
 osa-u.5   4340143   uncharacterized LOC4340143 
 zma-u.5   100193132   uncharacterized LOC100193132 
 tae-r.2   123167200   uncharacterized LOC123167200 
 tae-r.2   123151001   uncharacterized LOC123151001 
 tae-r.2   123088079   uncharacterized LOC123088079 
 hvu-r.1   123411238   uncharacterized LOC123411238 
 sbi-r.1   8071322   uncharacterized LOC8071322 
 bdi-r.1   100846437   uncharacterized LOC100846437 
 cre-r.1   CHLRE_13g604850v5   uncharacterized protein 

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Top 50 coexpressed genes to AT4G32970 (ath-m.9 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to AT4G32970 (ath-m.9 coexpression data)

CoexMap"829434"


athAT4G32970 | Entrez gene ID : 829434      
Species ath bra bna ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 10 1 2 2 1 1 1 1 1 1 1 3 1 1 3 1 1 1 1
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0045739 [list] [network] positive regulation of DNA repair  (4 genes)  IEA  
GO CC
GO:0070552 [list] [network] BRISC complex  (5 genes)  IEA  
GO:0005737 [list] [network] cytoplasm  (14000 genes)  ISM  
GO MF
Protein NP_195023.3 [sequence] [blastp]
Subcellular
localization
wolf
nucl 10  (predict for NP_195023.3)
Subcellular
localization
TargetP
other 9  (predict for NP_195023.3)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-m.9
for
AT4G32970
ath-u.5
for
AT4G32970
ath-r.7
for
AT4G32970
ath-e.2
for
AT4G32970
ath-m.4.bio
for
AT4G32970
ath-m.4.hor
for
AT4G32970
ath-m.4.lig
for
AT4G32970
ath-m.4.str
for
AT4G32970
ath-m.4.tis
for
AT4G32970
ath-u.5
for
AT4G32960
bra-r.6
for
103862208
bna-r.1
for
BNAC07G44040D
bna-r.1
for
106423403
ghi-r.1
for
107906991
ghi-r.1
for
107941871
cit-r.1
for
102611871
gma-u.5
for
100527612
vvi-u.5
for
100260976
ppo-u.5
for
7463711
mtr-u.5
for
25489640
sly-u.5
for
101267881
sot-r.1
for
102596388
nta-r.1
for
107824468
nta-r.1
for
107779842
nta-r.1
for
107779572
osa-u.5
for
4340143
zma-u.5
for
100193132
tae-r.2
for
123167200
tae-r.2
for
123151001
tae-r.2
for
123088079
hvu-r.1
for
123411238
sbi-r.1
for
8071322
bdi-r.1
for
100846437
cre-r.1
for
CHLRE_13g604850v5


Ortholog ID: 9060
Species ath ath bra bna bna ghi ghi cit gma vvi ppo mtr sly sot nta nta nta osa zma tae tae tae hvu sbi bdi cre
Symbol AT4G32970 AT4G32960 LOC103862208 BNAC07G44040D LOC106423403 LOC107906991 LOC107941871 LOC102611871 LOC100527612 LOC100260976 LOC7463711 LOC25489640 LOC101267881 LOC102596388 LOC107824468 LOC107779842 LOC107779572 LOC4340143 LOC100193132 LOC123167200 LOC123151001 LOC123088079 LOC123411238 LOC8071322 LOC100846437 CHLRE_13g604850v5
Function* BRISC/BRCA1-A complex protein BRISC/BRCA1-A complex protein uncharacterized LOC103862208 uncharacterized BNAC07G44040D uncharacterized LOC106423403 uncharacterized LOC107906991 uncharacterized LOC107941871 hypothetical protein uncharacterized LOC100527612 uncharacterized LOC100260976 uncharacterized LOC7463711 BRISC and BRCA1-A complex member 1 uncharacterized LOC101267881 uncharacterized LOC102596388 uncharacterized LOC107824468 uncharacterized LOC107779842 uncharacterized LOC107779572 uncharacterized LOC4340143 uncharacterized LOC100193132 uncharacterized LOC123167200 uncharacterized LOC123151001 uncharacterized LOC123088079 uncharacterized LOC123411238 uncharacterized LOC8071322 uncharacterized LOC100846437 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00190 Oxidative phosphorylation 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03272 Virion - Hepatitis viruses 6
bna04144 Endocytosis 6
bna03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03272 Virion - Hepatitis viruses 6
bna04144 Endocytosis 6
bna03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04075 Plant hormone signal transduction 2
ghi03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04075 Plant hormone signal transduction 2
ghi03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04120 Ubiquitin mediated proteolysis 2
vvi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00240 Pyrimidine metabolism 2
mtr01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 4
sly03013 Nucleocytoplasmic transport 2
sly03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 5
sot03420 Nucleotide excision repair 2
sot04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 3
nta03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03440 Homologous recombination 2
nta04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04712 Circadian rhythm - plant 2
nta00920 Sulfur metabolism 2
nta03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00061 Fatty acid biosynthesis 4
tae01212 Fatty acid metabolism 4
tae04120 Ubiquitin mediated proteolysis 3
tae00780 Biotin metabolism 3
tae01240 Biosynthesis of cofactors 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04120 Ubiquitin mediated proteolysis 3
tae03440 Homologous recombination 3
tae04130 SNARE interactions in vesicular transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04120 Ubiquitin mediated proteolysis 3
tae03440 Homologous recombination 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04075 Plant hormone signal transduction 2
sbi00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03420 Nucleotide excision repair 2
bdi04141 Protein processing in endoplasmic reticulum 2
bdi03050 Proteasome 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 829434 829433 103862208 106406986 106423403 107906991 107941871 102611871 100527612 100260976 7463711 25489640 101267881 102596388 107824468 107779842 107779572 4340143 100193132 123167200 123151001 123088079 123411238 8071322 100846437 5724679
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