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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-m.9   UBP27   ubiquitin-specific protease 27 
 ath-u.5   UBP27   ubiquitin-specific protease 27 
 ath-r.7   UBP27   ubiquitin-specific protease 27 
 ath-e.2   UBP27   ubiquitin-specific protease 27 
 ath-m.4.bio   UBP27   ubiquitin-specific protease 27 
 ath-m.4.hor   UBP27   ubiquitin-specific protease 27 
 ath-m.4.lig   UBP27   ubiquitin-specific protease 27 
 ath-m.4.str   UBP27   ubiquitin-specific protease 27 
 ath-m.4.tis   UBP27   ubiquitin-specific protease 27 
 bra-r.6   103835125   ubiquitin carboxyl-terminal hydrolase 27 
 bna-r.1   106381983   ubiquitin carboxyl-terminal hydrolase 27 
 bna-r.1   106361504   ubiquitin carboxyl-terminal hydrolase 27-like 
 ghi-r.1   107919890   ubiquitin carboxyl-terminal hydrolase 27 
 ghi-r.1   107912924   ubiquitin carboxyl-terminal hydrolase 27 
 cit-r.1   102608942   ubiquitin carboxyl-terminal hydrolase 27 
 gma-u.5   100813815   ubiquitin carboxyl-terminal hydrolase 27 
 gma-u.5   100802492   ubiquitin carboxyl-terminal hydrolase 27 
 vvi-u.5   100266433   ubiquitin carboxyl-terminal hydrolase 27 
 ppo-u.5   7456283   ubiquitin carboxyl-terminal hydrolase 27 
 mtr-u.5   11428939   ubiquitin carboxyl-terminal hydrolase 27 
 sly-u.5   101263107   ubiquitin carboxyl-terminal hydrolase 27 
 sot-r.1   102603427   ubiquitin carboxyl-terminal hydrolase 27 
 nta-r.1   107827692   ubiquitin carboxyl-terminal hydrolase 27 
 nta-r.1   107765225   ubiquitin carboxyl-terminal hydrolase 27 
 nta-r.1   107825716   ubiquitin carboxyl-terminal hydrolase 27-like 
 osa-u.5   9266560   ubiquitin carboxyl-terminal hydrolase 27 
 zma-u.5   103633186   ubiquitin carboxyl-terminal hydrolase 27 
 zma-u.5   103651463   ubiquitin carboxyl-terminal hydrolase 27 
 zma-u.5   100193497   Ubiquitin carboxyl-terminal hydrolase 
 tae-r.2   123189213   ubiquitin carboxyl-terminal hydrolase 27 
 tae-r.2   123053313   ubiquitin carboxyl-terminal hydrolase 27 
 tae-r.2   123045468   ubiquitin carboxyl-terminal hydrolase 27 
 hvu-r.1   123426725   ubiquitin carboxyl-terminal hydrolase 27 
 sbi-r.1   8073997   ubiquitin carboxyl-terminal hydrolase 27 
 bdi-r.1   100826818   ubiquitin carboxyl-terminal hydrolase 27 

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Top 50 coexpressed genes to UBP27 (ath-m.9 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to UBP27 (ath-m.9 coexpression data)

CoexMap"830092"


athUBP27 | Entrez gene ID : 830092      
Species ath bra bna ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 9 1 2 2 1 2 1 1 1 1 1 3 1 3 3 1 1 1 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO:0005741 [list] [network] mitochondrial outer membrane  (37 genes)  IDA  
GO:0031966 [list] [network] mitochondrial membrane  (105 genes)  IDA  
GO:0005737 [list] [network] cytoplasm  (14000 genes)  ISM  
GO MF
GO:0004843 [list] [network] cysteine-type deubiquitinase activity  (39 genes)  IDA  
GO:0008233 [list] [network] peptidase activity  (264 genes)  IDA  
Protein NP_001190965.1 [sequence] [blastp]
NP_001320167.1 [sequence] [blastp]
NP_568058.1 [sequence] [blastp]
Subcellular
localization
wolf
mito 4,  nucl 3,  cysk 1,  chlo 1,  cyto 1,  plas 1,  cyto_plas 1  (predict for NP_001190965.1)
nucl 5,  mito 2,  cyto 1,  chlo_mito 1,  mito_plas 1  (predict for NP_001320167.1)
nucl 4,  mito 3,  chlo 1,  cyto 1,  plas 1,  cysk 1,  cysk_plas 1,  cyto_plas 1  (predict for NP_568058.1)
Subcellular
localization
TargetP
mito 7,  other 3  (predict for NP_001190965.1)
mito 7,  other 3  (predict for NP_001320167.1)
mito 7,  other 3  (predict for NP_568058.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-m.9
for
UBP27
ath-u.5
for
UBP27
ath-r.7
for
UBP27
ath-e.2
for
UBP27
ath-m.4.bio
for
UBP27
ath-m.4.hor
for
UBP27
ath-m.4.lig
for
UBP27
ath-m.4.str
for
UBP27
ath-m.4.tis
for
UBP27
bra-r.6
for
103835125
bna-r.1
for
106381983
bna-r.1
for
106361504
ghi-r.1
for
107919890
ghi-r.1
for
107912924
cit-r.1
for
102608942
gma-u.5
for
100813815
gma-u.5
for
100802492
vvi-u.5
for
100266433
ppo-u.5
for
7456283
mtr-u.5
for
11428939
sly-u.5
for
101263107
sot-r.1
for
102603427
nta-r.1
for
107827692
nta-r.1
for
107765225
nta-r.1
for
107825716
osa-u.5
for
9266560
zma-u.5
for
103633186
zma-u.5
for
103651463
zma-u.5
for
100193497
tae-r.2
for
123189213
tae-r.2
for
123053313
tae-r.2
for
123045468
hvu-r.1
for
123426725
sbi-r.1
for
8073997
bdi-r.1
for
100826818


Ortholog ID: 9069
Species ath bra bna bna ghi ghi cit gma gma vvi ppo mtr sly sot nta nta nta osa zma zma zma tae tae tae hvu sbi bdi
Symbol UBP27 LOC103835125 LOC106381983 LOC106361504 LOC107919890 LOC107912924 LOC102608942 LOC100813815 LOC100802492 LOC100266433 LOC7456283 LOC11428939 LOC101263107 LOC102603427 LOC107827692 LOC107765225 LOC107825716 LOC9266560 LOC103633186 LOC103651463 LOC100193497 LOC123189213 LOC123053313 LOC123045468 LOC123426725 LOC8073997 LOC100826818
Function* ubiquitin-specific protease 27 ubiquitin carboxyl-terminal hydrolase 27 ubiquitin carboxyl-terminal hydrolase 27 ubiquitin carboxyl-terminal hydrolase 27-like ubiquitin carboxyl-terminal hydrolase 27 ubiquitin carboxyl-terminal hydrolase 27 ubiquitin carboxyl-terminal hydrolase 27 ubiquitin carboxyl-terminal hydrolase 27 ubiquitin carboxyl-terminal hydrolase 27 ubiquitin carboxyl-terminal hydrolase 27 ubiquitin carboxyl-terminal hydrolase 27 ubiquitin carboxyl-terminal hydrolase 27 ubiquitin carboxyl-terminal hydrolase 27 ubiquitin carboxyl-terminal hydrolase 27 ubiquitin carboxyl-terminal hydrolase 27 ubiquitin carboxyl-terminal hydrolase 27 ubiquitin carboxyl-terminal hydrolase 27-like ubiquitin carboxyl-terminal hydrolase 27 ubiquitin carboxyl-terminal hydrolase 27 ubiquitin carboxyl-terminal hydrolase 27 Ubiquitin carboxyl-terminal hydrolase ubiquitin carboxyl-terminal hydrolase 27 ubiquitin carboxyl-terminal hydrolase 27 ubiquitin carboxyl-terminal hydrolase 27 ubiquitin carboxyl-terminal hydrolase 27 ubiquitin carboxyl-terminal hydrolase 27 ubiquitin carboxyl-terminal hydrolase 27
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03050 Proteasome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 3
bra03008 Ribosome biogenesis in eukaryotes 2
bra03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03020 RNA polymerase 3
bna03083 Polycomb repressive complex 2
bna04075 Plant hormone signal transduction 2
bna04626 Plant-pathogen interaction 2
bna03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03020 RNA polymerase 3
bna03008 Ribosome biogenesis in eukaryotes 2
bna03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03460 Fanconi anemia pathway 4
ghi00790 Folate biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00860 Porphyrin metabolism 2
ghi00790 Folate biosynthesis 2
ghi00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
ghi01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00310 Lysine degradation 2
gma03083 Polycomb repressive complex 2
gma04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00770 Pantothenate and CoA biosynthesis 2
sot03410 Base excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03013 Nucleocytoplasmic transport 2
zma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03013 Nucleocytoplasmic transport 2
zma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03060 Protein export 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03040 Spliceosome 2
hvu04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 830092 103835125 106381983 106361504 107919890 107912924 102608942 100813815 100802492 100266433 7456283 11428939 101263107 102603427 107827692 107765225 107825716 9266560 103633186 103651463 100193497 123189213 123053313 123045468 123426725 8073997 100826818
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