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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-m.9  AT4G39570  Galactose oxidase/kelch repeat superfamily protein 
 ath-u.5  AT4G39570  Galactose oxidase/kelch repeat superfamily protein 
 ath-r.7  AT4G39570  Galactose oxidase/kelch repeat superfamily protein 
 ath-e.2  AT4G39570  Galactose oxidase/kelch repeat superfamily protein 
 ath-m.4.bio  AT4G39570  Galactose oxidase/kelch repeat superfamily protein 
 ath-m.4.hor  AT4G39570  Galactose oxidase/kelch repeat superfamily protein 
 ath-m.4.lig  AT4G39570  Galactose oxidase/kelch repeat superfamily protein 
 ath-m.4.str  AT4G39570  Galactose oxidase/kelch repeat superfamily protein 
 ath-m.4.tis  AT4G39570  Galactose oxidase/kelch repeat superfamily protein 
 bra-r.6  103854517  F-box/kelch-repeat protein At4g39550 
 bra-r.6  103849934  F-box/kelch-repeat protein At4g39550-like 
 bra-r.6  103828032  F-box/kelch-repeat protein At4g39550 
 bna-r.1  106439075  F-box/kelch-repeat protein At4g39550 
 bna-r.1  106439067  F-box/kelch-repeat protein At4g39550-like 

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Top 50 coexpressed genes to AT4G39570 (ath-m.9 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to AT4G39570 (ath-m.9 coexpression data)

CoexMap"830111"


athAT4G39570 | Entrez gene ID : 830111
Species ath bra bna vvi bdi ppo sbi gma ghi cit hvu sot sly nta osa tae zma cre mtr
Paralog 9 3 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO:0005737 [list] [network] cytoplasm  (14000 genes)  ISM  
GO MF
Protein NP_195667.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 4,  chlo 2,  mito 2,  chlo_mito 2,  cysk_nucl 2  (predict for NP_195667.1)
Subcellular
localization
TargetP
chlo 8,  other 3  (predict for NP_195667.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID
Other ID Link Target Condition-specific* Reference

ath-m.9
for
AT4G39570


ath-u.5
for
AT4G39570


ath-r.7
for
AT4G39570


ath-e.2
for
AT4G39570


ath-m.4.bio
for
AT4G39570


ath-m.4.hor
for
AT4G39570


ath-m.4.lig
for
AT4G39570


ath-m.4.str
for
AT4G39570


ath-m.4.tis
for
AT4G39570


bra-r.6
for
103854517


bra-r.6
for
103849934


bra-r.6
for
103828032


bna-r.1
for
106439075


bna-r.1
for
106439067



Ortholog ID: 8379
Species ath bra bra bra bna bna
Symbol AT4G25710 LOC103854517 LOC103849934 LOC103828032 LOC106411094 LOC106351466
Function* Galactose oxidase/kelch repeat superfamily protein F-box/kelch-repeat protein At4g39550 F-box/kelch-repeat protein At4g39550-like F-box/kelch-repeat protein At4g39550 F-box/kelch-repeat protein At4g39550-like F-box/kelch-repeat protein At4g39550-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00941 Flavonoid biosynthesis 7
bra04712 Circadian rhythm - plant 3
bra00400 Phenylalanine, tyrosine and tryptophan biosynthesis 2
bra01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra01230 Biosynthesis of amino acids 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 828676 103854517 103849934 103828032 106411094 106351466
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