ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
ath-m.9	EIF2 ALPHA	eukaryotic translation initiation factor 2 alpha subunit
ath-u.5	EIF2 ALPHA	eukaryotic translation initiation factor 2 alpha subunit
ath-r.7	EIF2 ALPHA	eukaryotic translation initiation factor 2 alpha subunit
ath-e.2	EIF2 ALPHA	eukaryotic translation initiation factor 2 alpha subunit
ath-m.4.bio	EIF2 ALPHA	eukaryotic translation initiation factor 2 alpha subunit
ath-m.4.hor	EIF2 ALPHA	eukaryotic translation initiation factor 2 alpha subunit
ath-m.4.lig	EIF2 ALPHA	eukaryotic translation initiation factor 2 alpha subunit
ath-m.4.str	EIF2 ALPHA	eukaryotic translation initiation factor 2 alpha subunit
ath-m.4.tis	EIF2 ALPHA	eukaryotic translation initiation factor 2 alpha subunit
ath-u.5	AT2G40290	Eukaryotic translation initiation factor 2 subunit 1
bra-r.6	103857925	eukaryotic translation initiation factor 2 subunit alpha homolog
bra-r.6	103865783	eukaryotic translation initiation factor 2 subunit alpha homolog
bra-r.6	103866961	eukaryotic translation initiation factor 2 subunit alpha homolog
bna-r.1	106450841	eukaryotic translation initiation factor 2 subunit alpha homolog
bna-r.1	125609257	eukaryotic translation initiation factor 2 subunit alpha homolog
bna-r.1	106400728	eukaryotic translation initiation factor 2 subunit alpha homolog
ghi-r.1	107946988	eukaryotic translation initiation factor 2 subunit alpha homolog
ghi-r.1	107896487	eukaryotic translation initiation factor 2 subunit alpha homolog
ghi-r.1	107890678	eukaryotic translation initiation factor 2 subunit alpha homolog
cit-r.1	102615936	eukaryotic translation initiation factor 2 subunit alpha homolog
gma-u.5	100815696	eukaryotic translation initiation factor 2 subunit alpha-like
gma-u.5	100805950	eukaryotic translation initiation factor 2 subunit alpha homolog
vvi-u.5	100243244	eukaryotic translation initiation factor 2 subunit alpha homolog
vvi-u.5	100250061	eukaryotic translation initiation factor 2 subunit alpha homolog
ppo-u.5	7472445	eukaryotic translation initiation factor 2 subunit alpha homolog
ppo-u.5	7464626	eukaryotic translation initiation factor 2 subunit alpha homolog
mtr-u.5	11410362	eukaryotic translation initiation factor 2 subunit alpha homolog
mtr-u.5	11417999	eukaryotic translation initiation factor 2 subunit alpha homolog
mtr-u.5	11418000	eukaryotic translation initiation factor 2 subunit alpha homolog
sly-u.5	101257451	eukaryotic translation initiation factor 2 alpha subunit family protein
sot-r.1	102579457	eukaryotic translation initiation factor 2 subunit alpha-like
nta-r.1	107816022	eukaryotic translation initiation factor 2 subunit alpha homolog
nta-r.1	107816922	eukaryotic translation initiation factor 2 subunit alpha homolog
nta-r.1	107765718	eukaryotic translation initiation factor 2 subunit alpha homolog
osa-u.5	4332538	eukaryotic translation initiation factor 2 subunit alpha homolog
zma-u.5	100279728	Eukaryotic translation initiation factor 2 subunit alpha
zma-u.5	100193869	Eukaryotic translation initiation factor 2 subunit alpha
tae-r.2	123043549	eukaryotic translation initiation factor 2 subunit alpha homolog
tae-r.2	123092423	eukaryotic translation initiation factor 2 subunit alpha homolog
tae-r.2	123097746	eukaryotic translation initiation factor 2 subunit alpha homolog
hvu-r.1	123448881	eukaryotic translation initiation factor 2 subunit alpha homolog
hvu-r.1	123424612	eukaryotic translation initiation factor 2 subunit alpha homolog
sbi-r.1	8081122	eukaryotic translation initiation factor 2 subunit alpha homolog
bdi-r.1	100823707	eukaryotic translation initiation factor 2 subunit alpha homolog
bdi-r.1	100842622	eukaryotic translation initiation factor 2 subunit alpha homolog
cre-r.1	CHLRE_12g490000v5	uncharacterized protein

Top 50 coexpressed genes to EIF2 ALPHA (ath-m.9 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to EIF2 ALPHA (ath-m.9 coexpression data)

CoexMap"830430"

[Cytoscape]

Annotation

functional annotation

KEGG

ath04141 [list] [network] Protein processing in endoplasmic reticulum (220 genes)

GO BP

GO CC

GO:0005850 [list] [network] eukaryotic translation initiation factor 2 complex	(2 genes)	ISS
GO:0005886 [list] [network] plasma membrane	(2598 genes)	HDA
GO:0005737 [list] [network] cytoplasm	(14000 genes)	ISM

GO MF

GO:0003743 [list] [network] translation initiation factor activity

(37 genes)

ISS

Protein

NP_196166.1 [sequence] [blastp]

Subcellular
localization
wolf

cyto 8, cysk 1

(predict for NP_196166.1)

Subcellular
localization
TargetP

other 7

(predict for NP_196166.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target				Condition-specific^*					Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	ath-m.9 for EIF2 ALPHA	ath-u.5 for EIF2 ALPHA	ath-r.7 for EIF2 ALPHA	ath-e.2 for EIF2 ALPHA	ath-m.4.bio for EIF2 ALPHA	ath-m.4.hor for EIF2 ALPHA	ath-m.4.lig for EIF2 ALPHA	ath-m.4.str for EIF2 ALPHA	ath-m.4.tis for EIF2 ALPHA	ath-u.5 for AT2G40290	bra-r.6 for 103857925	bra-r.6 for 103865783	bra-r.6 for 103866961	bna-r.1 for 106450841	bna-r.1 for 125609257	bna-r.1 for 106400728	ghi-r.1 for 107946988	ghi-r.1 for 107896487	ghi-r.1 for 107890678	cit-r.1 for 102615936	gma-u.5 for 100815696	gma-u.5 for 100805950	vvi-u.5 for 100243244	vvi-u.5 for 100250061	ppo-u.5 for 7472445	ppo-u.5 for 7464626	mtr-u.5 for 11410362	mtr-u.5 for 11417999	mtr-u.5 for 11418000	sly-u.5 for 101257451	sot-r.1 for 102579457	nta-r.1 for 107816022	nta-r.1 for 107816922	nta-r.1 for 107765718	osa-u.5 for 4332538	zma-u.5 for 100279728	zma-u.5 for 100193869	tae-r.2 for 123043549	tae-r.2 for 123092423	tae-r.2 for 123097746	hvu-r.1 for 123448881	hvu-r.1 for 123424612	sbi-r.1 for 8081122	bdi-r.1 for 100823707	bdi-r.1 for 100842622	cre-r.1 for CHLRE_12g490000v5

Ortholog

Ortholog ID: 3917

Species

ath

bra

bna

ghi

cit

gma

vvi

ppo

mtr

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

cre

Symbol

Function^*

eukaryotic translation initiation factor 2 alpha subunit

Eukaryotic translation initiation factor 2 subunit 1

eukaryotic translation initiation factor 2 subunit alpha homolog

eukaryotic translation initiation factor 2 subunit alpha-like

eukaryotic translation initiation factor 2 subunit alpha homolog

eukaryotic translation initiation factor 2 alpha subunit family protein

eukaryotic translation initiation factor 2 subunit alpha-like

eukaryotic translation initiation factor 2 subunit alpha homolog

Eukaryotic translation initiation factor 2 subunit alpha

eukaryotic translation initiation factor 2 subunit alpha homolog

uncharacterized protein

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03008	Ribosome biogenesis in eukaryotes	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath00970	Aminoacyl-tRNA biosynthesis	4
ath03018	RNA degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03010	Ribosome	3
bra03040	Spliceosome	2
bra00970	Aminoacyl-tRNA biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03010	Ribosome	8
bra03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03010	Ribosome	4
bra03008	Ribosome biogenesis in eukaryotes	2
bra03015	mRNA surveillance pathway	2
bra03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna04141	Protein processing in endoplasmic reticulum	5
bna03015	mRNA surveillance pathway	4
bna00970	Aminoacyl-tRNA biosynthesis	3
bna03013	Nucleocytoplasmic transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna04141	Protein processing in endoplasmic reticulum	5
bna03015	mRNA surveillance pathway	4
bna00970	Aminoacyl-tRNA biosynthesis	3
bna03013	Nucleocytoplasmic transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna04141	Protein processing in endoplasmic reticulum	5
bna03015	mRNA surveillance pathway	4
bna03013	Nucleocytoplasmic transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04141	Protein processing in endoplasmic reticulum	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04141	Protein processing in endoplasmic reticulum	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04141	Protein processing in endoplasmic reticulum	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit00970	Aminoacyl-tRNA biosynthesis	2
cit03008	Ribosome biogenesis in eukaryotes	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03010	Ribosome	2
gma03040	Spliceosome	2
gma04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04141	Protein processing in endoplasmic reticulum	4
gma03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi00020	Citrate cycle (TCA cycle)	3
vvi01200	Carbon metabolism	3
vvi03040	Spliceosome	3
vvi00010	Glycolysis / Gluconeogenesis	2
vvi00620	Pyruvate metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03010	Ribosome	2
vvi00261	Monobactam biosynthesis	2
vvi00300	Lysine biosynthesis	2
vvi01230	Biosynthesis of amino acids	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03010	Ribosome	16

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03010	Ribosome	5
ppo03008	Ribosome biogenesis in eukaryotes	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr04141	Protein processing in endoplasmic reticulum	4
mtr03050	Proteasome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr04141	Protein processing in endoplasmic reticulum	3
mtr00970	Aminoacyl-tRNA biosynthesis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr04141	Protein processing in endoplasmic reticulum	3
mtr00970	Aminoacyl-tRNA biosynthesis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03010	Ribosome	11

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03010	Ribosome	5
sot03013	Nucleocytoplasmic transport	3
sot03015	mRNA surveillance pathway	2
sot03040	Spliceosome	2
sot03018	RNA degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04626	Plant-pathogen interaction	3
nta03018	RNA degradation	2
nta03083	Polycomb repressive complex	2
nta04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03018	RNA degradation	2
nta03040	Spliceosome	2
nta04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03008	Ribosome biogenesis in eukaryotes	2
nta04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa03010	Ribosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03010	Ribosome	7
zma04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03050	Proteasome	12
zma04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03015	mRNA surveillance pathway	3
tae00190	Oxidative phosphorylation	3
tae04141	Protein processing in endoplasmic reticulum	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04141	Protein processing in endoplasmic reticulum	4
tae03015	mRNA surveillance pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04141	Protein processing in endoplasmic reticulum	3
tae03013	Nucleocytoplasmic transport	2
tae03015	mRNA surveillance pathway	2
tae03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu03010	Ribosome	11

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03010	Ribosome	6
sbi03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi03010	Ribosome	2
bdi04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi04141	Protein processing in endoplasmic reticulum	3
bdi03013	Nucleocytoplasmic transport	2
bdi03040	Spliceosome	2
bdi03020	RNA polymerase	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cre00970	Aminoacyl-tRNA biosynthesis	3
cre03040	Spliceosome	3

Expression

Expression pattern

Entrez Gene ID^*

830430

818621

103857925

103865783

103866961

125609257

106438031

106447429

107946988

107896487

107936421

102615936

100815696

100805950

100243244

100250061

7472445

7464626

11410362

11417999

11418000

101257451

102579457

107816022

107765718

107796781

4332538

100279728

100193869

123097746

123085605

123051411

123448881

123424612

8081122

100823707

100842622

5716695

The preparation time of this page was 0.2 [sec].


Species	ath	bra	bna	ghi	cit	gma	vvi	ppo	mtr	sly	sot	nta	osa	zma	tae	hvu	sbi	bdi	cre
Paralog	10	3	3	3	1	2	2	2	3	1	1	3	1	2	3	2	1	2	1

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to EIF2 ALPHA (ath-m.9 coexpression data)

Top 50 enrichment test to EIF2 ALPHA (ath-m.9 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**