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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-m.9   TCP17   TCP domain protein 17 
 ath-u.5   TCP17   TCP domain protein 17 
 ath-r.7   TCP17   TCP domain protein 17 
 ath-e.2   TCP17   TCP domain protein 17 
 ath-m.4.bio   TCP17   TCP domain protein 17 
 ath-m.4.hor   TCP17   TCP domain protein 17 
 ath-m.4.lig   TCP17   TCP domain protein 17 
 ath-m.4.str   TCP17   TCP domain protein 17 
 ath-m.4.tis   TCP17   TCP domain protein 17 
 ath-u.5   PTF1   plastid transcription factor 1 
 ath-u.5   TCP5   TEOSINTE BRANCHED 1, cycloidea and PCF transcription factor 5 
 bra-r.6   103858942   transcription factor TCP13 
 bra-r.6   103854927   transcription factor TCP5 
 bra-r.6   103860559   transcription factor TCP5 
 ghi-r.1   107951214   transcription factor TCP17 
 ghi-r.1   107953484   transcription factor TCP5 
 ghi-r.1   107959769   transcription factor TCP5 
 cit-r.1   102610499   transcription factor TCP5 
 cit-r.1   102628733   transcription factor TCP17 
 gma-u.5   100788984   transcription factor TCP5 
 gma-u.5   100803100   transcription factor TCP13 
 gma-u.5   100807091   transcription factor TCP13 
 vvi-u.5   100852855   transcription factor TCP5 
 vvi-u.5   100263410   transcription factor TCP13 
 ppo-u.5   7467903   transcription factor TCP13 
 ppo-u.5   112327176   transcription factor TCP13 
 mtr-u.5   25497543   transcription factor TCP17 
 mtr-u.5   25495356   transcription factor TCP13 
 sly-u.5   TCP4   TCP transcription factor 4 
 sly-u.5   TCP6   TCP transcription factor 6 
 sot-r.1   102601022   transcription factor TCP13-like 
 sot-r.1   102580219   transcription factor TCP17 
 nta-r.1   107763082   transcription factor TCP13-like 
 nta-r.1   107773728   transcription factor TCP5-like 
 nta-r.1   107775251   transcription factor TCP5-like 
 osa-u.5   4339298   transcription factor TCP13 
 osa-u.5   4327032   transcription factor PCF6-like 
 zma-u.5   100194214   uncharacterized LOC100194214 
 zma-u.5   100281328   uncharacterized LOC100281328 
 zma-u.5   100284941   uncharacterized LOC100284941 
 tae-r.2   123062141   uncharacterized LOC123062141 
 tae-r.2   123070865   transcription factor TCP13 
 tae-r.2   123079257   uncharacterized LOC123079257 
 hvu-r.1   123440284   uncharacterized LOC123440284 
 hvu-r.1   123416458   transcription factor PCF6-like 
 sbi-r.1   8080107   transcription factor PCF8 
 sbi-r.1   8072107   uncharacterized LOC8072107 
 bdi-r.1   100833785   transcription factor PCF6 
 bdi-r.1   100831334   transcription factor TCP24 

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Top 50 coexpressed genes to TCP17 (ath-m.9 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to TCP17 (ath-m.9 coexpression data)

CoexMap"830701"


athTCP17 | Entrez gene ID : 830701      
Species ath bra ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre bna
Paralog 11 3 3 2 3 2 2 2 2 2 3 2 3 3 2 2 2 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0045962 [list] [network] positive regulation of development, heterochronic  (8 genes)  IGI  
GO:0009965 [list] [network] leaf morphogenesis  (103 genes)  IGI  
GO:0010150 [list] [network] leaf senescence  (128 genes)  IGI  
GO:0048366 [list] [network] leaf development  (371 genes)  IGI  
GO:0030154 [list] [network] cell differentiation  (627 genes)  IGI  
GO:0006355 [list] [network] regulation of DNA-templated transcription  (1618 genes)  TAS  
GO CC
GO:0005634 [list] [network] nucleus  (10367 genes)  ISM  
GO MF
GO:0003700 [list] [network] DNA-binding transcription factor activity  (1620 genes)  ISS  
GO:0005515 [list] [network] protein binding  (5363 genes)  IPI  
Protein NP_001318505.1 [sequence] [blastp]
NP_196424.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 7,  extr 1,  chlo 1,  cysk 1  (predict for NP_001318505.1)
nucl 7,  extr 1,  chlo 1,  cysk 1  (predict for NP_196424.1)
Subcellular
localization
TargetP
chlo 5,  other 3  (predict for NP_001318505.1)
chlo 5,  other 3  (predict for NP_196424.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-m.9
for
TCP17
ath-u.5
for
TCP17
ath-r.7
for
TCP17
ath-e.2
for
TCP17
ath-m.4.bio
for
TCP17
ath-m.4.hor
for
TCP17
ath-m.4.lig
for
TCP17
ath-m.4.str
for
TCP17
ath-m.4.tis
for
TCP17
ath-u.5
for
PTF1
ath-u.5
for
TCP5
bra-r.6
for
103858942
bra-r.6
for
103854927
bra-r.6
for
103860559
ghi-r.1
for
107951214
ghi-r.1
for
107953484
ghi-r.1
for
107959769
cit-r.1
for
102610499
cit-r.1
for
102628733
gma-u.5
for
100788984
gma-u.5
for
100803100
gma-u.5
for
100807091
vvi-u.5
for
100852855
vvi-u.5
for
100263410
ppo-u.5
for
7467903
ppo-u.5
for
112327176
mtr-u.5
for
25497543
mtr-u.5
for
25495356
sly-u.5
for
TCP4
sly-u.5
for
TCP6
sot-r.1
for
102601022
sot-r.1
for
102580219
nta-r.1
for
107763082
nta-r.1
for
107773728
nta-r.1
for
107775251
osa-u.5
for
4339298
osa-u.5
for
4327032
zma-u.5
for
100194214
zma-u.5
for
100281328
zma-u.5
for
100284941
tae-r.2
for
123062141
tae-r.2
for
123070865
tae-r.2
for
123079257
hvu-r.1
for
123440284
hvu-r.1
for
123416458
sbi-r.1
for
8080107
sbi-r.1
for
8072107
bdi-r.1
for
100833785
bdi-r.1
for
100831334


Ortholog ID: 1662
Species ath ath ath bra bra bra bna bna ghi ghi ghi cit cit gma gma gma vvi vvi ppo ppo mtr sly sly sot sot nta nta nta osa osa zma zma zma tae tae tae hvu hvu sbi sbi bdi bdi
Symbol TCP17 PTF1 TCP5 LOC103854927 LOC103860559 LOC103855757 LOC125609548 LOC106438918 LOC107951214 LOC107953484 LOC107946551 LOC102610499 LOC102628733 LOC100803100 LOC100816424 LOC102665855 LOC100852855 LOC100263410 LOC7467903 LOC112327176 LOC25495356 TCP4 TCP5 LOC102601022 LOC102604765 LOC107773728 LOC107775251 LOC107791186 LOC4339298 LOC4327032 LOC100194214 LOC100281328 LOC100284941 LOC123062141 LOC123070865 LOC123079257 LOC123440284 LOC123416458 LOC8080107 LOC8072107 LOC100833785 LOC100831334
Function* TCP domain protein 17 plastid transcription factor 1 TEOSINTE BRANCHED 1, cycloidea and PCF transcription factor 5 transcription factor TCP5 transcription factor TCP5 transcription factor TCP17 transcription factor TCP13-like transcription factor TCP13-like transcription factor TCP17 transcription factor TCP5 transcription factor TCP17 transcription factor TCP5 transcription factor TCP17 transcription factor TCP13 transcription factor TCP13 transcription factor TCP5 transcription factor TCP5 transcription factor TCP13 transcription factor TCP13 transcription factor TCP13 transcription factor TCP13 TCP transcription factor 4 TCP transcription factor 5 transcription factor TCP13-like transcription factor TCP5-like transcription factor TCP5-like transcription factor TCP5-like transcription factor TCP5 transcription factor TCP13 transcription factor PCF6-like uncharacterized LOC100194214 uncharacterized LOC100281328 uncharacterized LOC100284941 uncharacterized LOC123062141 transcription factor TCP13 uncharacterized LOC123079257 uncharacterized LOC123440284 transcription factor PCF6-like transcription factor PCF8 uncharacterized LOC8072107 transcription factor PCF6 transcription factor TCP24
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00040 Pentose and glucuronate interconversions 9
ghi00500 Starch and sucrose metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00910 Nitrogen metabolism 3
ghi00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00940 Phenylpropanoid biosynthesis 2
cit00941 Flavonoid biosynthesis 2
cit00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00100 Steroid biosynthesis 2
cit00073 Cutin, suberine and wax biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04075 Plant hormone signal transduction 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00902 Monoterpenoid biosynthesis 2
gma00906 Carotenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00902 Monoterpenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00196 Photosynthesis - antenna proteins 3
vvi00195 Photosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00220 Arginine biosynthesis 2
sly01210 2-Oxocarboxylic acid metabolism 2
sly01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00902 Monoterpenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00904 Diterpenoid biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00230 Purine metabolism 2
hvu01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi01240 Biosynthesis of cofactors 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 830701 821061 836218 103854927 103860559 103855757 125609548 106438918 107951214 107953484 107946551 102610499 102628733 100803100 100816424 102665855 100852855 100263410 7467903 112327176 25495356 100736453 100736516 102601022 102604765 107773728 107775251 107791186 4339298 4327032 100194214 100281328 100284941 123062141 123070865 123079257 123440284 123416458 8080107 8072107 100833785 100831334
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