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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-m.9   NF-YA1   nuclear factor Y, subunit A1 
 ath-u.5   NF-YA1   nuclear factor Y, subunit A1 
 ath-r.7   NF-YA1   nuclear factor Y, subunit A1 
 ath-e.2   NF-YA1   nuclear factor Y, subunit A1 
 ath-m.4.bio   NF-YA1   nuclear factor Y, subunit A1 
 ath-m.4.hor   NF-YA1   nuclear factor Y, subunit A1 
 ath-m.4.lig   NF-YA1   nuclear factor Y, subunit A1 
 ath-m.4.str   NF-YA1   nuclear factor Y, subunit A1 
 ath-m.4.tis   NF-YA1   nuclear factor Y, subunit A1 
 bra-r.6   103855982   nuclear transcription factor Y subunit A-1 
 bra-r.6   103846627   nuclear transcription factor Y subunit A-1 
 bra-r.6   103850828   nuclear transcription factor Y subunit A-1 
 bna-r.1   106454664   nuclear transcription factor Y subunit A-1 
 bna-r.1   106431947   nuclear transcription factor Y subunit A-1 
 bna-r.1   106383881   nuclear transcription factor Y subunit A-1 
 ghi-r.1   121212660   nuclear transcription factor Y subunit A-1 
 ghi-r.1   107945212   nuclear transcription factor Y subunit A-1 
 cit-r.1   102628969   nuclear transcription factor Y subunit A-1 
 gma-u.5   NF-YA02   nuclear transcription factor Y subunit A-2 
 gma-u.5   NF-YA14   nuclear transcription factor Y subunit A-14 
 gma-u.5   NF-YA20   nuclear transcription factor Y subunit A-20 
 vvi-u.5   100251945   nuclear transcription factor Y subunit A-1 
 ppo-u.5   7467369   nuclear transcription factor Y subunit A-1 
 ppo-u.5   7484033   nuclear transcription factor Y subunit A-1 
 mtr-u.5   11443562   nuclear transcription factor Y subunit A-1 
 sly-u.5   101248742   nuclear transcription factor Y subunit A-1 
 sly-u.5   101264750   nuclear transcription factor Y subunit A-1 
 sot-r.1   102595987   nuclear transcription factor Y subunit A-1-like 
 sot-r.1   102600754   nuclear transcription factor Y subunit A-1 
 nta-r.1   107767894   nuclear transcription factor Y subunit A-1 
 nta-r.1   107782518   nuclear transcription factor Y subunit A-1-like 
 nta-r.1   107792129   nuclear transcription factor Y subunit A-1 

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Top 50 coexpressed genes to NF-YA1 (ath-m.9 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to NF-YA1 (ath-m.9 coexpression data)

CoexMap"831124"


athNF-YA1 | Entrez gene ID : 831124      
Species ath bra bna ghi cit gma vvi ppo mtr sly sot nta cre hvu tae bdi osa zma sbi
Paralog 9 3 3 2 1 3 1 2 1 2 2 3 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0010262 [list] [network] somatic embryogenesis  (27 genes)  IMP  
GO:0048510 [list] [network] regulation of timing of transition from vegetative to reproductive phase  (43 genes)  IMP  
GO:0055046 [list] [network] microgametogenesis  (63 genes)  IMP  
GO:0009793 [list] [network] embryo development ending in seed dormancy  (569 genes)  IMP NAS  
GO:0048316 [list] [network] seed development  (775 genes)  IMP  
GO:0006355 [list] [network] regulation of DNA-templated transcription  (1618 genes)  ISS  
GO CC
GO:0016602 [list] [network] CCAAT-binding factor complex  (12 genes)  ISS  
GO:0005634 [list] [network] nucleus  (10367 genes)  ISM  
GO MF
GO:0000976 [list] [network] transcription cis-regulatory region binding  (716 genes)  IPI  
GO:0003700 [list] [network] DNA-binding transcription factor activity  (1620 genes)  IGI ISS  
Protein NP_001318552.1 [sequence] [blastp]
NP_568282.1 [sequence] [blastp]
NP_850811.1 [sequence] [blastp]
NP_974773.1 [sequence] [blastp]
NP_974774.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 10  (predict for NP_001318552.1)
nucl 10  (predict for NP_568282.1)
nucl 10  (predict for NP_850811.1)
nucl 10  (predict for NP_974773.1)
nucl 10  (predict for NP_974774.1)
Subcellular
localization
TargetP
other 7,  chlo 3  (predict for NP_001318552.1)
other 7,  chlo 3  (predict for NP_568282.1)
other 7,  chlo 3  (predict for NP_850811.1)
other 7,  chlo 3  (predict for NP_974773.1)
other 7,  chlo 3  (predict for NP_974774.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-m.9
for
NF-YA1
ath-u.5
for
NF-YA1
ath-r.7
for
NF-YA1
ath-e.2
for
NF-YA1
ath-m.4.bio
for
NF-YA1
ath-m.4.hor
for
NF-YA1
ath-m.4.lig
for
NF-YA1
ath-m.4.str
for
NF-YA1
ath-m.4.tis
for
NF-YA1
bra-r.6
for
103855982
bra-r.6
for
103846627
bra-r.6
for
103850828
bna-r.1
for
106454664
bna-r.1
for
106431947
bna-r.1
for
106383881
ghi-r.1
for
121212660
ghi-r.1
for
107945212
cit-r.1
for
102628969
gma-u.5
for
NF-YA02
gma-u.5
for
NF-YA14
gma-u.5
for
NF-YA20
vvi-u.5
for
100251945
ppo-u.5
for
7467369
ppo-u.5
for
7484033
mtr-u.5
for
11443562
sly-u.5
for
101248742
sly-u.5
for
101264750
sot-r.1
for
102595987
sot-r.1
for
102600754
nta-r.1
for
107767894
nta-r.1
for
107782518
nta-r.1
for
107792129


Ortholog ID: 8127
Species ath bra bra bra bna bna bna ghi ghi cit gma gma gma vvi ppo ppo mtr sly sly sot sot nta nta nta
Symbol NF-YA1 LOC103855982 LOC103846627 LOC103850828 LOC106454664 LOC106383881 LOC106372376 LOC121212660 LOC107945212 LOC102628969 NF-YA02 NF-YA14 NF-YA20 LOC100251945 LOC7467369 LOC7484033 LOC11443562 LOC101248742 LOC101264750 LOC102595987 LOC102600754 LOC107767894 LOC107792129 LOC107832352
Function* nuclear factor Y, subunit A1 nuclear transcription factor Y subunit A-1 nuclear transcription factor Y subunit A-1 nuclear transcription factor Y subunit A-1 nuclear transcription factor Y subunit A-1 nuclear transcription factor Y subunit A-1 nuclear transcription factor Y subunit A-1 nuclear transcription factor Y subunit A-1 nuclear transcription factor Y subunit A-1 nuclear transcription factor Y subunit A-1 nuclear transcription factor Y subunit A-2 nuclear transcription factor Y subunit A-14 nuclear transcription factor Y subunit A-20 nuclear transcription factor Y subunit A-1 nuclear transcription factor Y subunit A-1 nuclear transcription factor Y subunit A-1 nuclear transcription factor Y subunit A-1 nuclear transcription factor Y subunit A-1 nuclear transcription factor Y subunit A-1 nuclear transcription factor Y subunit A-1-like nuclear transcription factor Y subunit A-1 nuclear transcription factor Y subunit A-1 nuclear transcription factor Y subunit A-1 nuclear transcription factor Y subunit A-1
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04136 Autophagy - other 4
bna04141 Protein processing in endoplasmic reticulum 2
bna04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04016 MAPK signaling pathway - plant 5
bna04075 Plant hormone signal transduction 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04016 MAPK signaling pathway - plant 2
gma04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04016 MAPK signaling pathway - plant 2
gma04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00630 Glyoxylate and dicarboxylate metabolism 2
ppo01200 Carbon metabolism 2
ppo04146 Peroxisome 2
ppo04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 4
sly04120 Ubiquitin mediated proteolysis 3
sly04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04141 Protein processing in endoplasmic reticulum 5
sot03040 Spliceosome 4
sot04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00562 Inositol phosphate metabolism 2
nta04070 Phosphatidylinositol signaling system 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00562 Inositol phosphate metabolism 2
nta04070 Phosphatidylinositol signaling system 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 831124 103855982 103846627 103850828 106454664 106383881 106372376 121212660 107945212 102628969 102664020 100815617 100808378 100251945 7467369 7484033 11443562 101248742 101264750 102595987 102600754 107767894 107792129 107832352
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