ATTED-II : GeneCoexpression result

Species	Gene	Description
nta-r.1	107782518	nuclear transcription factor Y subunit A-1-like
nta-r.1	107767894	nuclear transcription factor Y subunit A-1
nta-r.1	107792129	nuclear transcription factor Y subunit A-1
nta-r.1	107832352	nuclear transcription factor Y subunit A-1
sly-u.5	101248742	nuclear transcription factor Y subunit A-1
sly-u.5	101264750	nuclear transcription factor Y subunit A-1
sot-r.1	102600754	nuclear transcription factor Y subunit A-1
sot-r.1	102595987	nuclear transcription factor Y subunit A-1-like
ath-u.5	NF-YA1	nuclear factor Y, subunit A1
gma-u.5	NF-YA14	nuclear transcription factor Y subunit A-14
gma-u.5	NF-YA20	nuclear transcription factor Y subunit A-20
gma-u.5	NF-YA07	nuclear transcription factor Y subunit A-7
bra-r.6	103846627	nuclear transcription factor Y subunit A-1
bra-r.6	103850828	nuclear transcription factor Y subunit A-1
bra-r.6	103855982	nuclear transcription factor Y subunit A-1
vvi-u.5	100251945	nuclear transcription factor Y subunit A-1
ppo-u.5	7484033	nuclear transcription factor Y subunit A-1
ppo-u.5	7467369	nuclear transcription factor Y subunit A-1
mtr-u.5	11443562	nuclear transcription factor Y subunit A-1
ghi-r.1	121212660	nuclear transcription factor Y subunit A-1
ghi-r.1	107945212	nuclear transcription factor Y subunit A-1
bna-r.1	106454664	nuclear transcription factor Y subunit A-1
bna-r.1	106431947	nuclear transcription factor Y subunit A-1
bna-r.1	106383881	nuclear transcription factor Y subunit A-1
cit-r.1	102628969	nuclear transcription factor Y subunit A-1

Annotation

functional annotation

KEGG

GO BP

GO:0006355 [list] [network] regulation of DNA-templated transcription

(2987 genes)

IEA

GO CC

GO:0016602 [list] [network] CCAAT-binding factor complex

(41 genes)

IEA

GO MF

GO:0003700 [list] [network] DNA-binding transcription factor activity	(2091 genes)	IEA
GO:0003677 [list] [network] DNA binding	(3714 genes)	IEA

Protein

XP_075100660.1 [sequence] [blastp]

Subcellular
localization
wolf

nucl 9, cyto_nucl 5

(predict for XP_075100660.1)

Subcellular
localization
TargetP

other 2

(predict for XP_075100660.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	nta-r.1 for 107782518	nta-r.1 for 107767894	nta-r.1 for 107792129	nta-r.1 for 107832352	sly-u.5 for 101248742	sly-u.5 for 101264750	sot-r.1 for 102600754	sot-r.1 for 102595987	ath-u.5 for NF-YA1	gma-u.5 for NF-YA14	gma-u.5 for NF-YA20	gma-u.5 for NF-YA07	bra-r.6 for 103846627	bra-r.6 for 103850828	bra-r.6 for 103855982	vvi-u.5 for 100251945	ppo-u.5 for 7484033	ppo-u.5 for 7467369	mtr-u.5 for 11443562	ghi-r.1 for 121212660	ghi-r.1 for 107945212	bna-r.1 for 106454664	bna-r.1 for 106431947	bna-r.1 for 106383881	cit-r.1 for 102628969

Ortholog

Ortholog ID: 8127

Species

nta

sly

sot

ath

gma

bra

vvi

ppo

mtr

ghi

bna

cit

Symbol

NF-YA1

NF-YA14

NF-YA20

NF-YA02

Function^*

nuclear transcription factor Y subunit A-1

nuclear transcription factor Y subunit A-1-like

nuclear factor Y, subunit A1

nuclear transcription factor Y subunit A-14

nuclear transcription factor Y subunit A-20

nuclear transcription factor Y subunit A-2

nuclear transcription factor Y subunit A-1

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00562	Inositol phosphate metabolism	2
nta04070	Phosphatidylinositol signaling system	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00562	Inositol phosphate metabolism	2
nta04070	Phosphatidylinositol signaling system	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03040	Spliceosome	4
sly04120	Ubiquitin mediated proteolysis	3
sly04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot04141	Protein processing in endoplasmic reticulum	5
sot03040	Spliceosome	4
sot04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04016	MAPK signaling pathway - plant	2
gma04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04016	MAPK signaling pathway - plant	2
gma04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo00630	Glyoxylate and dicarboxylate metabolism	2
ppo01200	Carbon metabolism	2
ppo04146	Peroxisome	2
ppo04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04075	Plant hormone signal transduction	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04075	Plant hormone signal transduction	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04075	Plant hormone signal transduction	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna04136	Autophagy - other	4
bna04141	Protein processing in endoplasmic reticulum	2
bna04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna04016	MAPK signaling pathway - plant	5
bna04075	Plant hormone signal transduction	5

Expression

Expression pattern

Entrez Gene ID^*

107767894

107792129

107832352

101248742

101264750

102600754

102595987

831124

100815617

100808378

102664020

103846627

103850828

103855982

100251945

7484033

7467369

11443562

121212660

107945212

106454664

106383881

106372376

102628969

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 107782518 (nta-r.1 coexpression data)

Top 50 enrichment test to 107782518 (nta-r.1 coexpression data)


Species	nta	sly	sot	ath	gma	bra	vvi	ppo	mtr	ghi	bna	cit	bdi	osa	tae	zma	cre	sbi	hvu
Paralog	4	2	2	1	3	3	1	2	1	2	3	1	0	0	0	0	0	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 107782518 (nta-r.1 coexpression data)

Top 50 enrichment test to 107782518 (nta-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**