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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-m.9   AGL15   AGAMOUS-like 15 
 ath-u.5   AGL15   AGAMOUS-like 15 
 ath-r.7   AGL15   AGAMOUS-like 15 
 ath-e.2   AGL15   AGAMOUS-like 15 
 ath-m.4.bio   AGL15   AGAMOUS-like 15 
 ath-m.4.hor   AGL15   AGAMOUS-like 15 
 ath-m.4.lig   AGL15   AGAMOUS-like 15 
 ath-m.4.str   AGL15   AGAMOUS-like 15 
 ath-m.4.tis   AGL15   AGAMOUS-like 15 
 ath-u.5   AGL18   AGAMOUS-like 18 
 bra-r.6   103863049   agamous-like MADS-box protein AGL18 
 bra-r.6   103856031   agamous-like MADS-box protein AGL15 
 bra-r.6   103846540   agamous-like MADS-box protein AGL15 
 bna-r.1   125593423   agamous-like MADS-box protein AGL15 
 bna-r.1   125579041   agamous-like MADS-box protein AGL15 
 cit-r.1   102612882   agamous-like MADS-box protein AGL15 
 gma-u.5   AGL15   AGL15 protein 
 gma-u.5   100792278   agamous-like MADS-box protein AGL18 
 gma-u.5   100776732   agamous-like MADS-box protein AGL15 
 vvi-u.5   100253397   agamous-like MADS-box protein AGL15 
 sly-u.5   101260573   agamous-like MADS-box protein AGL15 

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Top 50 coexpressed genes to AGL15 (ath-m.9 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to AGL15 (ath-m.9 coexpression data)

CoexMap"831224"


athAGL15 | Entrez gene ID : 831224      
Species ath bra bna cit gma vvi sly sbi ghi cre ppo mtr tae zma osa sot bdi nta hvu
Paralog 10 3 2 1 3 1 1 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0060867 [list] [network] fruit abscission  (1 genes)  IMP  
GO:2000692 [list] [network] negative regulation of seed maturation  (2 genes)  IMP  
GO:0060862 [list] [network] negative regulation of floral organ abscission  (5 genes)  IMP  
GO:0048577 [list] [network] negative regulation of short-day photoperiodism, flowering  (7 genes)  IMP  
GO:0045487 [list] [network] gibberellin catabolic process  (10 genes)  TAS  
GO:0010047 [list] [network] fruit dehiscence  (13 genes)  IMP  
GO:0010227 [list] [network] floral organ abscission  (26 genes)  IEP IMP  
GO:0010262 [list] [network] somatic embryogenesis  (27 genes)  IMP  
GO:0009910 [list] [network] negative regulation of flower development  (50 genes)  IMP  
GO:0071365 [list] [network] cellular response to auxin stimulus  (93 genes)  IEP  
GO:0045892 [list] [network] negative regulation of DNA-templated transcription  (200 genes)  IDA  
GO:0045893 [list] [network] positive regulation of DNA-templated transcription  (262 genes)  IDA IGI  
GO:0010629 [list] [network] negative regulation of gene expression  (323 genes)  IMP  
GO:0009793 [list] [network] embryo development ending in seed dormancy  (569 genes)  IDA TAS  
GO CC
GO:0005634 [list] [network] nucleus  (10367 genes)  IDA ISM NAS TAS  
GO:0005737 [list] [network] cytoplasm  (14000 genes)  IDA TAS  
GO MF
GO:0042803 [list] [network] protein homodimerization activity  (237 genes)  IDA  
GO:0043565 [list] [network] sequence-specific DNA binding  (875 genes)  IDA  
GO:0003677 [list] [network] DNA binding  (1274 genes)  IDA IPI  
GO:0003700 [list] [network] DNA-binding transcription factor activity  (1620 genes)  IDA ISS  
GO:0140110 [list] [network] transcription regulator activity  (1690 genes)  IMP  
GO:0005515 [list] [network] protein binding  (5363 genes)  IPI  
Protein NP_001330207.1 [sequence] [blastp]
NP_196883.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 10  (predict for NP_001330207.1)
nucl 10  (predict for NP_196883.1)
Subcellular
localization
TargetP
other 5,  chlo 3  (predict for NP_001330207.1)
other 5,  chlo 3  (predict for NP_196883.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-m.9
for
AGL15
ath-u.5
for
AGL15
ath-r.7
for
AGL15
ath-e.2
for
AGL15
ath-m.4.bio
for
AGL15
ath-m.4.hor
for
AGL15
ath-m.4.lig
for
AGL15
ath-m.4.str
for
AGL15
ath-m.4.tis
for
AGL15
ath-u.5
for
AGL18
bra-r.6
for
103863049
bra-r.6
for
103856031
bra-r.6
for
103846540
bna-r.1
for
125593423
bna-r.1
for
125579041
cit-r.1
for
102612882
gma-u.5
for
AGL15
gma-u.5
for
100792278
gma-u.5
for
100776732
vvi-u.5
for
100253397
sly-u.5
for
101260573


Ortholog ID: 3592
Species ath ath bra bra bna bna cit gma gma gma vvi sly
Symbol AGL15 AGL18 LOC103863049 LOC103841644 LOC125593423 LOC125579041 LOC102612882 AGL15 LOC100792278 LOC100776732 LOC100253397 LOC101260573
Function* AGAMOUS-like 15 AGAMOUS-like 18 agamous-like MADS-box protein AGL18 agamous-like MADS-box protein AGL18 agamous-like MADS-box protein AGL15 agamous-like MADS-box protein AGL15 agamous-like MADS-box protein AGL15 AGL15 protein agamous-like MADS-box protein AGL18 agamous-like MADS-box protein AGL15 agamous-like MADS-box protein AGL15 agamous-like MADS-box protein AGL15
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04136 Autophagy - other 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00908 Zeatin biosynthesis 4
bna04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00908 Zeatin biosynthesis 4
bna04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00330 Arginine and proline metabolism 2
gma01230 Biosynthesis of amino acids 2
gma03015 mRNA surveillance pathway 2
gma03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04075 Plant hormone signal transduction 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 831224 824906 103863049 103841644 125593423 125579041 102612882 547732 100792278 100776732 100253397 101260573
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