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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-m.9   AT5G15390   tRNA/rRNA methyltransferase (SpoU) family protein 
 ath-u.5   AT5G15390   tRNA/rRNA methyltransferase (SpoU) family protein 
 ath-r.7   AT5G15390   tRNA/rRNA methyltransferase (SpoU) family protein 
 ath-e.2   AT5G15390   tRNA/rRNA methyltransferase (SpoU) family protein 
 ath-m.4.bio   AT5G15390   tRNA/rRNA methyltransferase (SpoU) family protein 
 ath-m.4.hor   AT5G15390   tRNA/rRNA methyltransferase (SpoU) family protein 
 ath-m.4.lig   AT5G15390   tRNA/rRNA methyltransferase (SpoU) family protein 
 ath-m.4.str   AT5G15390   tRNA/rRNA methyltransferase (SpoU) family protein 
 ath-m.4.tis   AT5G15390   tRNA/rRNA methyltransferase (SpoU) family protein 
 bra-r.6   103846415   tRNA (guanosine(18)-2'-O)-methyltransferase 
 bna-r.1   106424769   tRNA (guanosine(18)-2'-O)-methyltransferase-like 
 bna-r.1   106424778   tRNA (guanosine(18)-2'-O)-methyltransferase-like 
 ghi-r.1   107911821   tRNA (guanosine(18)-2'-O)-methyltransferase 
 ghi-r.1   107924744   tRNA (guanosine(18)-2'-O)-methyltransferase 
 cit-r.1   102622078   uncharacterized LOC102622078 
 gma-u.5   100784283   tRNA (guanosine(18)-2'-O)-methyltransferase 
 vvi-u.5   100259259   uncharacterized LOC100259259 
 ppo-u.5   7472597   uncharacterized LOC7472597 
 mtr-u.5   11416329   tRNA (guanosine(18)-2'-O)-methyltransferase 
 sly-u.5   101267667   uncharacterized LOC101267667 
 sot-r.1   102595691   tRNA (guanosine(18)-2'-O)-methyltransferase 
 nta-r.1   107827967   uncharacterized LOC107827967 
 nta-r.1   107777861   uncharacterized LOC107777861 
 nta-r.1   107760039   uncharacterized LOC107760039 
 osa-u.5   4343801   uncharacterized LOC4343801 
 zma-u.5   100502395   uncharacterized LOC100502395 
 tae-r.2   123052198   tRNA (guanosine(18)-2'-O)-methyltransferase 
 tae-r.2   123044334   tRNA (guanosine(18)-2'-O)-methyltransferase 
 tae-r.2   123188060   tRNA (guanosine(18)-2'-O)-methyltransferase 
 hvu-r.1   123425444   tRNA (guanosine(18)-2'-O)-methyltransferase 
 sbi-r.1   8060635   tRNA (guanosine(18)-2'-O)-methyltransferase 
 bdi-r.1   100820978   tRNA (guanosine(18)-2'-O)-methyltransferase 
 cre-r.1   CHLRE_03g169700v5   uncharacterized protein 

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Top 50 coexpressed genes to AT5G15390 (ath-m.9 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to AT5G15390 (ath-m.9 coexpression data)

CoexMap"831391"


athAT5G15390 | Entrez gene ID : 831391      
Species ath bra bna ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 9 1 2 2 1 1 1 1 1 1 1 3 1 1 3 1 1 1 1
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO:0009507 [list] [network] chloroplast  (5014 genes)  ISM  
GO MF
GO:0008173 [list] [network] RNA methyltransferase activity  (43 genes)  IEA  
Protein NP_001331160.1 [sequence] [blastp]
NP_197043.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 6,  mito 3  (predict for NP_001331160.1)
chlo 6,  mito 3  (predict for NP_197043.1)
Subcellular
localization
TargetP
chlo 8  (predict for NP_001331160.1)
chlo 8  (predict for NP_197043.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-m.9
for
AT5G15390
ath-u.5
for
AT5G15390
ath-r.7
for
AT5G15390
ath-e.2
for
AT5G15390
ath-m.4.bio
for
AT5G15390
ath-m.4.hor
for
AT5G15390
ath-m.4.lig
for
AT5G15390
ath-m.4.str
for
AT5G15390
ath-m.4.tis
for
AT5G15390
bra-r.6
for
103846415
bna-r.1
for
106424769
bna-r.1
for
106424778
ghi-r.1
for
107911821
ghi-r.1
for
107924744
cit-r.1
for
102622078
gma-u.5
for
100784283
vvi-u.5
for
100259259
ppo-u.5
for
7472597
mtr-u.5
for
11416329
sly-u.5
for
101267667
sot-r.1
for
102595691
nta-r.1
for
107827967
nta-r.1
for
107777861
nta-r.1
for
107760039
osa-u.5
for
4343801
zma-u.5
for
100502395
tae-r.2
for
123052198
tae-r.2
for
123044334
tae-r.2
for
123188060
hvu-r.1
for
123425444
sbi-r.1
for
8060635
bdi-r.1
for
100820978
cre-r.1
for
CHLRE_03g169700v5


Ortholog ID: 9660
Species ath bra bna bna ghi ghi cit gma vvi ppo mtr sly sot nta nta nta osa zma tae tae tae hvu sbi bdi cre
Symbol AT5G15390 LOC103846415 LOC106424769 LOC106424778 LOC107911821 LOC107924744 LOC102622078 LOC100784283 LOC100259259 LOC7472597 LOC11416329 LOC101267667 LOC102595691 LOC107827967 LOC107777861 LOC107760039 LOC4343801 LOC100502395 LOC123052198 LOC123044334 LOC123188060 LOC123425444 LOC8060635 LOC100820978 CHLRE_03g169700v5
Function* tRNA/rRNA methyltransferase (SpoU) family protein tRNA (guanosine(18)-2'-O)-methyltransferase tRNA (guanosine(18)-2'-O)-methyltransferase-like tRNA (guanosine(18)-2'-O)-methyltransferase-like tRNA (guanosine(18)-2'-O)-methyltransferase tRNA (guanosine(18)-2'-O)-methyltransferase uncharacterized LOC102622078 tRNA (guanosine(18)-2'-O)-methyltransferase uncharacterized LOC100259259 uncharacterized LOC7472597 tRNA (guanosine(18)-2'-O)-methyltransferase uncharacterized LOC101267667 tRNA (guanosine(18)-2'-O)-methyltransferase uncharacterized LOC107827967 uncharacterized LOC107777861 uncharacterized LOC107760039 uncharacterized LOC4343801 uncharacterized LOC100502395 tRNA (guanosine(18)-2'-O)-methyltransferase tRNA (guanosine(18)-2'-O)-methyltransferase tRNA (guanosine(18)-2'-O)-methyltransferase tRNA (guanosine(18)-2'-O)-methyltransferase tRNA (guanosine(18)-2'-O)-methyltransferase tRNA (guanosine(18)-2'-O)-methyltransferase uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04146 Peroxisome 2
ath00480 Glutathione metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00220 Arginine biosynthesis 2
gma00330 Arginine and proline metabolism 2
gma04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00220 Arginine biosynthesis 2
sot00240 Pyrimidine metabolism 2
sot00250 Alanine, aspartate and glutamate metabolism 2
sot01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00960 Tropane, piperidine and pyridine alkaloid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00960 Tropane, piperidine and pyridine alkaloid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00960 Tropane, piperidine and pyridine alkaloid biosynthesis 2
nta03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa01230 Biosynthesis of amino acids 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03040 Spliceosome 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 831391 103846415 106424769 106424778 107911821 107924744 102622078 100784283 100259259 7472597 11416329 101267667 102595691 107827967 107777861 107760039 4343801 100502395 123052198 123044334 123188060 123425444 8060635 100820978 5728959
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