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Orthologous genes in OrthoFinder**

Species Gene Description
 cre-r.1   CHLRE_03g169700v5   uncharacterized protein 
 ath-u.5   AT5G15390   tRNA/rRNA methyltransferase (SpoU) family protein 
 gma-u.5   100784283   tRNA (guanosine(18)-2'-O)-methyltransferase 
 sly-u.5   101267667   uncharacterized LOC101267667 
 osa-u.5   4343801   uncharacterized LOC4343801 
 zma-u.5   100502395   uncharacterized LOC100502395 
 vvi-u.5   100259259   uncharacterized LOC100259259 
 ppo-u.5   7472597   uncharacterized LOC7472597 
 mtr-u.5   11416329   tRNA (guanosine(18)-2'-O)-methyltransferase 

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Top 50 coexpressed genes to CHLRE_03g169700v5 (cre-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to CHLRE_03g169700v5 (cre-r.1 coexpression data)

CoexMap"5728959"


creCHLRE_03g169700v5 | Entrez gene ID : 5728959      
Species cre ath gma sly osa zma vvi ppo mtr sbi nta bra hvu cit bdi sot tae bna ghi
Paralog 1 1 1 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0002938 [list] [network] tRNA guanine ribose methylation  (2 genes)  IEA  
GO CC
GO MF
GO:0003723 [list] [network] RNA binding  (670 genes)  IEA  
Protein XP_001703327.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 6,  mito 4  (predict for XP_001703327.1)
Subcellular
localization
TargetP
mito 8,  chlo 4  (predict for XP_001703327.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cre-r.1
for
CHLRE_03g169700v5

.
ath-u.5
for
AT5G15390

.
gma-u.5
for
100784283

.
sly-u.5
for
101267667

.
osa-u.5
for
4343801

.
zma-u.5
for
100502395

.
vvi-u.5
for
100259259

.
ppo-u.5
for
7472597

.
mtr-u.5
for
11416329

.


Ortholog ID: 9660
Species ath gma sly osa zma bra vvi ppo mtr tae tae hvu ghi ghi bna bna cre sbi sot cit bdi nta nta
Symbol AT5G15390 LOC100784283 LOC101267667 LOC4343801 LOC100502395 LOC103846415 LOC100259259 LOC7472597 LOC11416329 LOC123188060 LOC123052198 LOC123425444 LOC107924744 LOC107911821 LOC106424769 LOC106424778 CHLRE_03g169700v5 LOC8060635 LOC102595691 LOC102622078 LOC100820978 LOC107777861 LOC107760039
Function* tRNA/rRNA methyltransferase (SpoU) family protein tRNA (guanosine(18)-2'-O)-methyltransferase uncharacterized LOC101267667 uncharacterized LOC4343801 uncharacterized LOC100502395 tRNA (guanosine(18)-2'-O)-methyltransferase uncharacterized LOC100259259 uncharacterized LOC7472597 tRNA (guanosine(18)-2'-O)-methyltransferase tRNA (guanosine(18)-2'-O)-methyltransferase tRNA (guanosine(18)-2'-O)-methyltransferase tRNA (guanosine(18)-2'-O)-methyltransferase tRNA (guanosine(18)-2'-O)-methyltransferase tRNA (guanosine(18)-2'-O)-methyltransferase tRNA (guanosine(18)-2'-O)-methyltransferase-like tRNA (guanosine(18)-2'-O)-methyltransferase-like uncharacterized protein tRNA (guanosine(18)-2'-O)-methyltransferase tRNA (guanosine(18)-2'-O)-methyltransferase uncharacterized LOC102622078 tRNA (guanosine(18)-2'-O)-methyltransferase uncharacterized LOC107777861 uncharacterized LOC107760039
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04146 Peroxisome 2
ath00480 Glutathione metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00220 Arginine biosynthesis 2
gma00330 Arginine and proline metabolism 2
gma04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa01230 Biosynthesis of amino acids 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00220 Arginine biosynthesis 2
sot00240 Pyrimidine metabolism 2
sot00250 Alanine, aspartate and glutamate metabolism 2
sot01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00960 Tropane, piperidine and pyridine alkaloid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00960 Tropane, piperidine and pyridine alkaloid biosynthesis 2
nta03060 Protein export 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 831391 100784283 101267667 4343801 100502395 103846415 100259259 7472597 11416329 123188060 123052198 123425444 107924744 107911821 106424769 106424778 5728959 8060635 102595691 102622078 100820978 107777861 107760039
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