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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-m.9  AT5G18600  Thioredoxin superfamily protein 
 ath-u.5  AT5G18600  Thioredoxin superfamily protein 
 ath-r.7  AT5G18600  Thioredoxin superfamily protein 
 ath-e.2  AT5G18600  Thioredoxin superfamily protein 
 ath-m.4.bio  AT5G18600  Thioredoxin superfamily protein 
 ath-m.4.hor  AT5G18600  Thioredoxin superfamily protein 
 ath-m.4.lig  AT5G18600  Thioredoxin superfamily protein 
 ath-m.4.str  AT5G18600  Thioredoxin superfamily protein 
 ath-m.4.tis  AT5G18600  Thioredoxin superfamily protein 
 ath-u.5  AT4G15660  Thioredoxin superfamily protein 
 ath-u.5  AT4G15670  Thioredoxin superfamily protein 
 ath-u.5  AT4G15680  Thioredoxin superfamily protein 
 bra-r.6  103856321  monothiol glutaredoxin-S2 
 bra-r.6  103851186  monothiol glutaredoxin-S2 
 bra-r.6  103845821  monothiol glutaredoxin-S2 
 bna-r.1  106419174  monothiol glutaredoxin-S4-like 
 bna-r.1  106431448  monothiol glutaredoxin-S2 
 ghi-r.1  107915907  monothiol glutaredoxin-S2 
 cit-r.1  102631303  monothiol glutaredoxin-S2 
 gma-u.5  100784603  monothiol glutaredoxin-S2 
 gma-u.5  100810642  monothiol glutaredoxin-S2 
 gma-u.5  100815509  monothiol glutaredoxin-S2 
 vvi-u.5  100259665  monothiol glutaredoxin-S2 
 ppo-u.5  7475965  monothiol glutaredoxin-S2 
 ppo-u.5  112325098  monothiol glutaredoxin-S2 
 ppo-u.5  18101857  monothiol glutaredoxin-S2 
 mtr-u.5  11411742  monothiol glutaredoxin-S2 
 mtr-u.5  11441859  monothiol glutaredoxin-S2 
 sly-u.5  101244989  monothiol glutaredoxin-S3 
 sly-u.5  101267713  monothiol glutaredoxin-S4-like 
 sot-r.1  102598582  monothiol glutaredoxin-S3 
 sot-r.1  102580535  monothiol glutaredoxin-S3-like 
 nta-r.1  107787884  monothiol glutaredoxin-S2-like 
 nta-r.1  107788163  monothiol glutaredoxin-S2 

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Top 50 coexpressed genes to AT5G18600 (ath-m.9 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to AT5G18600 (ath-m.9 coexpression data)

CoexMap"831978"


athAT5G18600 | Entrez gene ID : 831978
Species ath bra bna ghi cit gma vvi ppo mtr sly sot nta bdi osa tae zma cre sbi hvu
Paralog 12 3 2 1 1 3 1 3 2 2 2 2 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0000122 [list] [network] negative regulation of transcription by RNA polymerase II  (17 genes)  IDA  
GO CC
GO:0005737 [list] [network] cytoplasm  (14000 genes)  ISM  
GO MF
GO:0005515 [list] [network] protein binding  (5363 genes)  IPI  
Protein NP_197361.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 5,  chlo 3,  extr 1,  chlo_mito 1  (predict for NP_197361.1)
Subcellular
localization
TargetP
other 5  (predict for NP_197361.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID
Other ID Link Target Condition-specific* Reference

ath-m.9
for
AT5G18600


ath-u.5
for
AT5G18600


ath-r.7
for
AT5G18600


ath-e.2
for
AT5G18600


ath-m.4.bio
for
AT5G18600


ath-m.4.hor
for
AT5G18600


ath-m.4.lig
for
AT5G18600


ath-m.4.str
for
AT5G18600


ath-m.4.tis
for
AT5G18600


ath-u.5
for
AT4G15660


ath-u.5
for
AT4G15670


ath-u.5
for
AT4G15680


bra-r.6
for
103856321


bra-r.6
for
103851186


bra-r.6
for
103845821


bna-r.1
for
106419174


bna-r.1
for
106431448


ghi-r.1
for
107915907


cit-r.1
for
102631303


gma-u.5
for
100784603


gma-u.5
for
100810642


gma-u.5
for
100815509


vvi-u.5
for
100259665


ppo-u.5
for
7475965


ppo-u.5
for
112325098


ppo-u.5
for
18101857


mtr-u.5
for
11411742


mtr-u.5
for
11441859


sly-u.5
for
101244989


sly-u.5
for
101267713


sot-r.1
for
102598582


sot-r.1
for
102580535


nta-r.1
for
107787884


nta-r.1
for
107788163



Ortholog ID: 2095
Species ath ath ath bra bra bra bna ghi ghi cit gma gma gma vvi ppo ppo ppo mtr mtr sly sly sot sot nta nta
Symbol AT4G15660 AT4G15670 AT4G15680 LOC103851186 LOC103833517 LOC103833518 LOC106390551 LOC107939647 LOC121214482 LOC102631303 LOC100810642 LOC100815509 LOC100790463 LOC100259665 LOC7475965 LOC112325098 LOC18101857 LOC11411742 LOC11415168 LOC101244989 LOC101267713 LOC102598582 LOC102580535 LOC107787884 LOC107788163
Function* Thioredoxin superfamily protein Thioredoxin superfamily protein Thioredoxin superfamily protein monothiol glutaredoxin-S2 monothiol glutaredoxin-S4 monothiol glutaredoxin-S4 monothiol glutaredoxin-S4 monothiol glutaredoxin-S2 monothiol glutaredoxin-S2 monothiol glutaredoxin-S2 monothiol glutaredoxin-S2 monothiol glutaredoxin-S2 monothiol glutaredoxin-S2 monothiol glutaredoxin-S2 monothiol glutaredoxin-S2 monothiol glutaredoxin-S2 monothiol glutaredoxin-S2 monothiol glutaredoxin-S2 monothiol glutaredoxin-S2 monothiol glutaredoxin-S3 monothiol glutaredoxin-S4-like monothiol glutaredoxin-S3 monothiol glutaredoxin-S3-like monothiol glutaredoxin-S2-like monothiol glutaredoxin-S2
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00970 Aminoacyl-tRNA biosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly01200 Carbon metabolism 4
sly01230 Biosynthesis of amino acids 4
sly00630 Glyoxylate and dicarboxylate metabolism 3
sly00010 Glycolysis / Gluconeogenesis 2
sly00030 Pentose phosphate pathway 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 827243 827244 827245 103851186 103833517 103833518 106390551 107939647 121214482 102631303 100810642 100815509 100790463 100259665 7475965 112325098 18101857 11411742 11415168 101244989 101267713 102598582 102580535 107787884 107788163
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