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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-m.9   ARIA   ARM repeat protein interacting with ABF2 
 ath-u.5   ARIA   ARM repeat protein interacting with ABF2 
 ath-r.7   ARIA   ARM repeat protein interacting with ABF2 
 ath-e.2   ARIA   ARM repeat protein interacting with ABF2 
 ath-m.4.bio   ARIA   ARM repeat protein interacting with ABF2 
 ath-m.4.hor   ARIA   ARM repeat protein interacting with ABF2 
 ath-m.4.lig   ARIA   ARM repeat protein interacting with ABF2 
 ath-m.4.str   ARIA   ARM repeat protein interacting with ABF2 
 ath-m.4.tis   ARIA   ARM repeat protein interacting with ABF2 
 bra-r.6   103845762   ARM REPEAT PROTEIN INTERACTING WITH ABF2 
 bra-r.6   103856374   ARM REPEAT PROTEIN INTERACTING WITH ABF2 
 bna-r.1   106434257   ARM REPEAT PROTEIN INTERACTING WITH ABF2 
 bna-r.1   106371817   ARM REPEAT PROTEIN INTERACTING WITH ABF2 
 bna-r.1   106367886   ARM REPEAT PROTEIN INTERACTING WITH ABF2 
 ghi-r.1   107928552   ARM REPEAT PROTEIN INTERACTING WITH ABF2 
 ghi-r.1   107927756   ARM REPEAT PROTEIN INTERACTING WITH ABF2 
 ghi-r.1   121206334   ARM REPEAT PROTEIN INTERACTING WITH ABF2 
 cit-r.1   127901113   ARM REPEAT PROTEIN INTERACTING WITH ABF2-like 
 cit-r.1   102617812   ARM REPEAT PROTEIN INTERACTING WITH ABF2 
 gma-u.5   100819832   ARM REPEAT PROTEIN INTERACTING WITH ABF2 
 gma-u.5   100812456   ARM REPEAT PROTEIN INTERACTING WITH ABF2 
 gma-u.5   100796391   ARM REPEAT PROTEIN INTERACTING WITH ABF2 
 vvi-u.5   100249437   ARM REPEAT PROTEIN INTERACTING WITH ABF2 
 ppo-u.5   7457860   ARM REPEAT PROTEIN INTERACTING WITH ABF2 
 ppo-u.5   7480041   ARM REPEAT PROTEIN INTERACTING WITH ABF2 
 mtr-u.5   11409016   ARM REPEAT PROTEIN INTERACTING WITH ABF2 
 mtr-u.5   25499119   ARM REPEAT PROTEIN INTERACTING WITH ABF2 
 mtr-u.5   11439596   ARM REPEAT PROTEIN INTERACTING WITH ABF2 
 sly-u.5   101252406   ARM REPEAT PROTEIN INTERACTING WITH ABF2 
 sly-u.5   101256802   ARM REPEAT PROTEIN INTERACTING WITH ABF2-like 
 sot-r.1   102587715   ARM REPEAT PROTEIN INTERACTING WITH ABF2-like 
 sot-r.1   102597434   ARM REPEAT PROTEIN INTERACTING WITH ABF2-like 
 nta-r.1   107795514   ARM REPEAT PROTEIN INTERACTING WITH ABF2 
 nta-r.1   107776872   ARM REPEAT PROTEIN INTERACTING WITH ABF2-like 
 nta-r.1   107774183   ARM REPEAT PROTEIN INTERACTING WITH ABF2 
 osa-u.5   4338712   ARM REPEAT PROTEIN INTERACTING WITH ABF2 
 zma-u.5   100279213   ARM REPEAT PROTEIN INTERACTING WITH ABF2 
 zma-u.5   103630332   ARM REPEAT PROTEIN INTERACTING WITH ABF2 
 tae-r.2   123131955   ARM REPEAT PROTEIN INTERACTING WITH ABF2 
 tae-r.2   123054897   ARM REPEAT PROTEIN INTERACTING WITH ABF2 
 hvu-r.1   123441916   ARM REPEAT PROTEIN INTERACTING WITH ABF2 
 sbi-r.1   8085098   ARM REPEAT PROTEIN INTERACTING WITH ABF2 
 bdi-r.1   100841129   ARM REPEAT PROTEIN INTERACTING WITH ABF2 
 cre-r.1   CHLRE_04g231516v5   uncharacterized protein 

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Top 50 coexpressed genes to ARIA (ath-m.9 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to ARIA (ath-m.9 coexpression data)

CoexMap"832053"


athARIA | Entrez gene ID : 832053      
Species ath bra bna ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 9 2 3 3 2 3 1 2 3 2 2 3 1 2 2 1 1 1 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0010187 [list] [network] negative regulation of seed germination  (29 genes)  IMP  
GO:0009651 [list] [network] response to salt stress  (473 genes)  IEP  
GO:0009737 [list] [network] response to abscisic acid  (550 genes)  IEP IMP  
GO CC
GO:0005886 [list] [network] plasma membrane  (2598 genes)  IDA  
GO:0005634 [list] [network] nucleus  (10367 genes)  IDA ISM  
GO:0005737 [list] [network] cytoplasm  (14000 genes)  ISM  
GO MF
GO:0005515 [list] [network] protein binding  (5363 genes)  IPI  
Protein NP_197434.1 [sequence] [blastp]
NP_850852.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 5,  nucl 1,  vacu 1,  plas 1,  E.R. 1,  cysk 1,  cysk_plas 1,  E.R._plas 1  (predict for NP_197434.1)
cyto 7,  nucl 1,  vacu 1,  cysk 1,  nucl_plas 1  (predict for NP_850852.1)
Subcellular
localization
TargetP
other 8  (predict for NP_197434.1)
other 8  (predict for NP_850852.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-m.9
for
ARIA
ath-u.5
for
ARIA
ath-r.7
for
ARIA
ath-e.2
for
ARIA
ath-m.4.bio
for
ARIA
ath-m.4.hor
for
ARIA
ath-m.4.lig
for
ARIA
ath-m.4.str
for
ARIA
ath-m.4.tis
for
ARIA
bra-r.6
for
103845762
bra-r.6
for
103856374
bna-r.1
for
106434257
bna-r.1
for
106371817
bna-r.1
for
106367886
ghi-r.1
for
107928552
ghi-r.1
for
107927756
ghi-r.1
for
121206334
cit-r.1
for
127901113
cit-r.1
for
102617812
gma-u.5
for
100819832
gma-u.5
for
100812456
gma-u.5
for
100796391
vvi-u.5
for
100249437
ppo-u.5
for
7457860
ppo-u.5
for
7480041
mtr-u.5
for
11409016
mtr-u.5
for
25499119
mtr-u.5
for
11439596
sly-u.5
for
101252406
sly-u.5
for
101256802
sot-r.1
for
102587715
sot-r.1
for
102597434
nta-r.1
for
107795514
nta-r.1
for
107776872
nta-r.1
for
107774183
osa-u.5
for
4338712
zma-u.5
for
100279213
zma-u.5
for
103630332
tae-r.2
for
123131955
tae-r.2
for
123054897
hvu-r.1
for
123441916
sbi-r.1
for
8085098
bdi-r.1
for
100841129
cre-r.1
for
CHLRE_04g231516v5


Ortholog ID: 4129
Species ath bra bra bna bna bna ghi ghi ghi cit cit gma gma gma vvi ppo ppo mtr mtr mtr sly sly sot sot nta nta nta osa zma zma tae tae hvu sbi bdi cre
Symbol ARIA LOC103845762 LOC103856374 LOC106434257 LOC106371817 LOC106367886 LOC107927756 LOC121206334 LOC107942831 LOC127901113 LOC102617812 LOC100819832 LOC100812456 LOC100784348 LOC100249437 LOC7457860 LOC7459035 LOC11409016 LOC25499119 LOC11439596 LOC101252406 LOC101256802 LOC102587715 LOC102597434 LOC107795514 LOC107776872 LOC107832425 LOC4338712 LOC100279213 LOC103630332 LOC123131955 LOC123054897 LOC123441916 LOC8085098 LOC100841129 CHLRE_04g231516v5
Function* ARM repeat protein interacting with ABF2 ARM REPEAT PROTEIN INTERACTING WITH ABF2 ARM REPEAT PROTEIN INTERACTING WITH ABF2 ARM REPEAT PROTEIN INTERACTING WITH ABF2 ARM REPEAT PROTEIN INTERACTING WITH ABF2 ARM REPEAT PROTEIN INTERACTING WITH ABF2 ARM REPEAT PROTEIN INTERACTING WITH ABF2 ARM REPEAT PROTEIN INTERACTING WITH ABF2 ARM REPEAT PROTEIN INTERACTING WITH ABF2 ARM REPEAT PROTEIN INTERACTING WITH ABF2-like ARM REPEAT PROTEIN INTERACTING WITH ABF2 ARM REPEAT PROTEIN INTERACTING WITH ABF2 ARM REPEAT PROTEIN INTERACTING WITH ABF2 ARM REPEAT PROTEIN INTERACTING WITH ABF2 ARM REPEAT PROTEIN INTERACTING WITH ABF2 ARM REPEAT PROTEIN INTERACTING WITH ABF2 ARM REPEAT PROTEIN INTERACTING WITH ABF2 ARM REPEAT PROTEIN INTERACTING WITH ABF2 ARM REPEAT PROTEIN INTERACTING WITH ABF2 ARM REPEAT PROTEIN INTERACTING WITH ABF2 ARM REPEAT PROTEIN INTERACTING WITH ABF2 ARM REPEAT PROTEIN INTERACTING WITH ABF2-like ARM REPEAT PROTEIN INTERACTING WITH ABF2-like ARM REPEAT PROTEIN INTERACTING WITH ABF2-like ARM REPEAT PROTEIN INTERACTING WITH ABF2 ARM REPEAT PROTEIN INTERACTING WITH ABF2-like ARM REPEAT PROTEIN INTERACTING WITH ABF2 ARM REPEAT PROTEIN INTERACTING WITH ABF2 ARM REPEAT PROTEIN INTERACTING WITH ABF2 ARM REPEAT PROTEIN INTERACTING WITH ABF2 ARM REPEAT PROTEIN INTERACTING WITH ABF2 ARM REPEAT PROTEIN INTERACTING WITH ABF2 ARM REPEAT PROTEIN INTERACTING WITH ABF2 ARM REPEAT PROTEIN INTERACTING WITH ABF2 ARM REPEAT PROTEIN INTERACTING WITH ABF2 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04120 Ubiquitin mediated proteolysis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04120 Ubiquitin mediated proteolysis 4
bna03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04120 Ubiquitin mediated proteolysis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03030 DNA replication 8
cit04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00513 Various types of N-glycan biosynthesis 2
gma04141 Protein processing in endoplasmic reticulum 2
gma04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo02010 ABC transporters 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03030 DNA replication 5
mtr03430 Mismatch repair 3
mtr03420 Nucleotide excision repair 2
mtr03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04145 Phagosome 4
sly04517 IgSF CAM signaling 4
sly04814 Motor proteins 4
sly01230 Biosynthesis of amino acids 3
sly00260 Glycine, serine and threonine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00260 Glycine, serine and threonine metabolism 3
sot00470 D-Amino acid metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04144 Endocytosis 8
nta05100 Bacterial invasion of epithelial cells 6
nta04142 Lysosome 4
nta04141 Protein processing in endoplasmic reticulum 4
nta00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03082 ATP-dependent chromatin remodeling 2
nta03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03040 Spliceosome 2
osa03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04141 Protein processing in endoplasmic reticulum 3
zma04120 Ubiquitin mediated proteolysis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03015 mRNA surveillance pathway 4
tae03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 7
tae03015 mRNA surveillance pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03083 Polycomb repressive complex 3
sbi03030 DNA replication 2
sbi03410 Base excision repair 2
sbi03420 Nucleotide excision repair 2
sbi03430 Mismatch repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre04144 Endocytosis 6
cre03250 Viral life cycle - HIV-1 2
cre03272 Virion - Hepatitis viruses 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 832053 103845762 103856374 106434257 106371817 106367886 107927756 121206334 107942831 127901113 102617812 100819832 100812456 100784348 100249437 7457860 7459035 11409016 25499119 11439596 101252406 101256802 102587715 102597434 107795514 107776872 107832425 4338712 100279213 103630332 123131955 123054897 123441916 8085098 100841129 5729240
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