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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-m.9   RHF2A   RING-H2 group F2A 
 ath-u.5   RHF2A   RING-H2 group F2A 
 ath-r.7   RHF2A   RING-H2 group F2A 
 ath-e.2   RHF2A   RING-H2 group F2A 
 ath-m.4.bio   RHF2A   RING-H2 group F2A 
 ath-m.4.hor   RHF2A   RING-H2 group F2A 
 ath-m.4.lig   RHF2A   RING-H2 group F2A 
 ath-m.4.str   RHF2A   RING-H2 group F2A 
 ath-m.4.tis   RHF2A   RING-H2 group F2A 
 bra-r.6   103845580   E3 ubiquitin-protein ligase RHF2A 
 bra-r.6   103851418   E3 ubiquitin-protein ligase RHF2A 
 bna-r.1   106384839   E3 ubiquitin-protein ligase RHF2A-like 
 bna-r.1   106421372   E3 ubiquitin-protein ligase RHF2A 
 bna-r.1   106419786   E3 ubiquitin-protein ligase RHF2A 
 ghi-r.1   107949051   E3 ubiquitin-protein ligase RHF2A 
 ghi-r.1   107906660   E3 ubiquitin-protein ligase RHF2A 
 ghi-r.1   107915762   E3 ubiquitin-protein ligase RHF2A 
 cit-r.1   102611988   E3 ubiquitin-protein ligase RHF2A-like 
 cit-r.1   102622402   E3 ubiquitin-protein ligase RHF2A 
 cit-r.1   102609917   E3 ubiquitin-protein ligase RHF2A-like 
 gma-u.5   100803582   E3 ubiquitin-protein ligase RHF2A 
 gma-u.5   100780275   E3 ubiquitin-protein ligase RHF2A 
 gma-u.5   100800419   E3 ubiquitin-protein ligase RHF2A-like 
 vvi-u.5   100242721   E3 ubiquitin-protein ligase RHF2A 
 vvi-u.5   100254749   E3 ubiquitin-protein ligase-like 
 ppo-u.5   7488073   E3 ubiquitin-protein ligase RHF2A 
 ppo-u.5   7486664   E3 ubiquitin-protein ligase RHF2A 
 ppo-u.5   7479486   E3 ubiquitin-protein ligase RHF2A 
 mtr-u.5   11422637   E3 ubiquitin-protein ligase RHF2A 
 mtr-u.5   25499520   E3 ubiquitin-protein ligase RHF2A 
 sly-u.5   101263713   E3 ubiquitin-protein ligase RHF2A 
 sly-u.5   101243755   E3 ubiquitin-protein ligase RHF2A 
 sly-u.5   101263219   E3 ubiquitin-protein ligase RHF2A 
 sot-r.1   102583355   E3 ubiquitin-protein ligase RHF2A 
 sot-r.1   102590573   E3 ubiquitin-protein ligase RHF2A-like 
 sot-r.1   102582693   E3 ubiquitin-protein ligase RHF2A-like 
 nta-r.1   107809506   E3 ubiquitin-protein ligase RHF2A 
 nta-r.1   107764546   E3 ubiquitin-protein ligase RHF2A-like 
 nta-r.1   107774233   E3 ubiquitin-protein ligase RHF2A 
 osa-u.5   9270248   E3 ubiquitin-protein ligase RHF2A 
 osa-u.5   4334369   E3 ubiquitin-protein ligase RHF2A 
 zma-u.5   100191868   uncharacterized LOC100191868 
 zma-u.5   100191926   uncharacterized LOC100191926 
 tae-r.2   123045051   E3 ubiquitin-protein ligase RHF2A 
 tae-r.2   123052829   E3 ubiquitin-protein ligase RHF2A 
 tae-r.2   123086154   E3 ubiquitin-protein ligase RHF2A 
 hvu-r.1   123426187   E3 ubiquitin-protein ligase RHF2A-like 
 hvu-r.1   123448438   E3 ubiquitin-protein ligase RHF2A 
 sbi-r.1   8061644   E3 ubiquitin-protein ligase RHF2A 
 sbi-r.1   8081146   E3 ubiquitin-protein ligase RHF2A 
 sbi-r.1   110435650   E3 ubiquitin-protein ligase RHF2A-like 
 bdi-r.1   100836678   E3 ubiquitin-protein ligase RHF2A 
 bdi-r.1   100833434   E3 ubiquitin-protein ligase RHF2A 

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Top 50 coexpressed genes to RHF2A (ath-m.9 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to RHF2A (ath-m.9 coexpression data)

CoexMap"832260"


athRHF2A | Entrez gene ID : 832260      
Species ath bra bna ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 9 2 3 3 3 3 2 3 2 3 3 3 2 2 3 2 3 2 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0055046 [list] [network] microgametogenesis  (63 genes)  IGI  
GO:0009561 [list] [network] megagametogenesis  (80 genes)  IGI  
GO:0051726 [list] [network] regulation of cell cycle  (135 genes)  IGI  
GO:0051603 [list] [network] proteolysis involved in protein catabolic process  (242 genes)  IGI  
GO CC
GO:0005634 [list] [network] nucleus  (10367 genes)  ISM  
GO MF
Protein NP_001331677.1 [sequence] [blastp]
NP_568410.1 [sequence] [blastp]
NP_851050.1 [sequence] [blastp]
NP_851051.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 9  (predict for NP_001331677.1)
nucl 10  (predict for NP_568410.1)
nucl 10  (predict for NP_851050.1)
nucl 9  (predict for NP_851051.1)
Subcellular
localization
TargetP
other 8  (predict for NP_001331677.1)
other 9  (predict for NP_568410.1)
other 9  (predict for NP_851050.1)
other 8  (predict for NP_851051.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-m.9
for
RHF2A
ath-u.5
for
RHF2A
ath-r.7
for
RHF2A
ath-e.2
for
RHF2A
ath-m.4.bio
for
RHF2A
ath-m.4.hor
for
RHF2A
ath-m.4.lig
for
RHF2A
ath-m.4.str
for
RHF2A
ath-m.4.tis
for
RHF2A
bra-r.6
for
103845580
bra-r.6
for
103851418
bna-r.1
for
106384839
bna-r.1
for
106421372
bna-r.1
for
106419786
ghi-r.1
for
107949051
ghi-r.1
for
107906660
ghi-r.1
for
107915762
cit-r.1
for
102611988
cit-r.1
for
102622402
cit-r.1
for
102609917
gma-u.5
for
100803582
gma-u.5
for
100780275
gma-u.5
for
100800419
vvi-u.5
for
100242721
vvi-u.5
for
100254749
ppo-u.5
for
7488073
ppo-u.5
for
7486664
ppo-u.5
for
7479486
mtr-u.5
for
11422637
mtr-u.5
for
25499520
sly-u.5
for
101263713
sly-u.5
for
101243755
sly-u.5
for
101263219
sot-r.1
for
102583355
sot-r.1
for
102590573
sot-r.1
for
102582693
nta-r.1
for
107809506
nta-r.1
for
107764546
nta-r.1
for
107774233
osa-u.5
for
9270248
osa-u.5
for
4334369
zma-u.5
for
100191868
zma-u.5
for
100191926
tae-r.2
for
123045051
tae-r.2
for
123052829
tae-r.2
for
123086154
hvu-r.1
for
123426187
hvu-r.1
for
123448438
sbi-r.1
for
8061644
sbi-r.1
for
8081146
sbi-r.1
for
110435650
bdi-r.1
for
100836678
bdi-r.1
for
100833434


Ortholog ID: 2503
Species ath bra bra bna bna bna ghi ghi ghi cit cit cit gma gma gma vvi vvi ppo ppo ppo mtr mtr sly sly sly sot sot sot nta nta nta osa osa zma zma tae tae tae hvu hvu sbi sbi sbi bdi bdi
Symbol RHF2A LOC103845580 LOC103851418 LOC106419786 LOC106371671 LOC106386962 LOC107906660 LOC107954231 LOC107959234 LOC102611988 LOC102622402 LOC102609917 LOC100800419 LOC100819110 LOC100814908 LOC100242721 LOC100254749 LOC7488073 LOC7486664 LOC7479486 LOC11422637 LOC25499520 LOC101263713 LOC101243755 LOC101263219 LOC102583355 LOC102590573 LOC102582693 LOC107764546 LOC107774233 LOC107825171 LOC9270248 LOC4334369 LOC100191868 LOC100191926 LOC123052829 LOC123086154 LOC123172620 LOC123426187 LOC123448438 LOC8061644 LOC8081146 LOC110435650 LOC100836678 LOC100833434
Function* RING-H2 group F2A E3 ubiquitin-protein ligase RHF2A E3 ubiquitin-protein ligase RHF2A E3 ubiquitin-protein ligase RHF2A E3 ubiquitin-protein ligase RHF2A E3 ubiquitin-protein ligase RHF2A E3 ubiquitin-protein ligase RHF2A E3 ubiquitin-protein ligase RHF2A E3 ubiquitin-protein ligase RHF2A E3 ubiquitin-protein ligase RHF2A-like E3 ubiquitin-protein ligase RHF2A E3 ubiquitin-protein ligase RHF2A-like E3 ubiquitin-protein ligase RHF2A-like E3 ubiquitin-protein ligase RHF2A E3 ubiquitin-protein ligase RHF2A E3 ubiquitin-protein ligase RHF2A E3 ubiquitin-protein ligase-like E3 ubiquitin-protein ligase RHF2A E3 ubiquitin-protein ligase RHF2A E3 ubiquitin-protein ligase RHF2A E3 ubiquitin-protein ligase RHF2A E3 ubiquitin-protein ligase RHF2A E3 ubiquitin-protein ligase RHF2A E3 ubiquitin-protein ligase RHF2A E3 ubiquitin-protein ligase RHF2A E3 ubiquitin-protein ligase RHF2A E3 ubiquitin-protein ligase RHF2A-like E3 ubiquitin-protein ligase RHF2A-like E3 ubiquitin-protein ligase RHF2A-like E3 ubiquitin-protein ligase RHF2A E3 ubiquitin-protein ligase RHF2A E3 ubiquitin-protein ligase RHF2A E3 ubiquitin-protein ligase RHF2A uncharacterized LOC100191868 uncharacterized LOC100191926 E3 ubiquitin-protein ligase RHF2A E3 ubiquitin-protein ligase RHF2A E3 ubiquitin-protein ligase RHF2A E3 ubiquitin-protein ligase RHF2A-like E3 ubiquitin-protein ligase RHF2A E3 ubiquitin-protein ligase RHF2A E3 ubiquitin-protein ligase RHF2A E3 ubiquitin-protein ligase RHF2A-like E3 ubiquitin-protein ligase RHF2A E3 ubiquitin-protein ligase RHF2A
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04130 SNARE interactions in vesicular transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00760 Nicotinate and nicotinamide metabolism 2
cit01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04120 Ubiquitin mediated proteolysis 3
gma03083 Polycomb repressive complex 2
gma04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04130 SNARE interactions in vesicular transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04141 Protein processing in endoplasmic reticulum 3
gma03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo01210 2-Oxocarboxylic acid metabolism 2
ppo01230 Biosynthesis of amino acids 2
ppo04130 SNARE interactions in vesicular transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00240 Pyrimidine metabolism 2
ppo00410 beta-Alanine metabolism 2
ppo00770 Pantothenate and CoA biosynthesis 2
ppo01210 2-Oxocarboxylic acid metabolism 2
ppo01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03083 Polycomb repressive complex 2
nta04144 Endocytosis 2
nta04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04141 Protein processing in endoplasmic reticulum 2
zma03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03015 mRNA surveillance pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03050 Proteasome 2
sbi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04075 Plant hormone signal transduction 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 832260 103845580 103851418 106419786 106371671 106386962 107906660 107954231 107959234 102611988 102622402 102609917 100800419 100819110 100814908 100242721 100254749 7488073 7486664 7479486 11422637 25499520 101263713 101243755 101263219 102583355 102590573 102582693 107764546 107774233 107825171 9270248 4334369 100191868 100191926 123052829 123086154 123172620 123426187 123448438 8061644 8081146 110435650 100836678 100833434
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