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Orthologous genes in OrthoFinder**

Species Gene Description
 sbi-r.1   110435650   E3 ubiquitin-protein ligase RHF2A-like 
 zma-u.5   100191868   uncharacterized LOC100191868 
 zma-u.5   100191926   uncharacterized LOC100191926 
 osa-u.5   9270248   E3 ubiquitin-protein ligase RHF2A 
 osa-u.5   4334369   E3 ubiquitin-protein ligase RHF2A 
 ath-u.5   RHF2A   RING-H2 group F2A 
 gma-u.5   100803582   E3 ubiquitin-protein ligase RHF2A 
 gma-u.5   100800419   E3 ubiquitin-protein ligase RHF2A-like 
 gma-u.5   100780275   E3 ubiquitin-protein ligase RHF2A 
 sly-u.5   101263219   E3 ubiquitin-protein ligase RHF2A 
 sly-u.5   101243755   E3 ubiquitin-protein ligase RHF2A 
 sly-u.5   101263713   E3 ubiquitin-protein ligase RHF2A 
 vvi-u.5   100254749   E3 ubiquitin-protein ligase-like 
 vvi-u.5   100242721   E3 ubiquitin-protein ligase RHF2A 
 ppo-u.5   7479486   E3 ubiquitin-protein ligase RHF2A 
 ppo-u.5   7486664   E3 ubiquitin-protein ligase RHF2A 
 ppo-u.5   7488073   E3 ubiquitin-protein ligase RHF2A 
 mtr-u.5   25499520   E3 ubiquitin-protein ligase RHF2A 
 mtr-u.5   11422637   E3 ubiquitin-protein ligase RHF2A 

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Top 50 coexpressed genes to 110435650 (sbi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 110435650 (sbi-r.1 coexpression data)

CoexMap"110435650"


sbiLOC110435650 | Entrez gene ID : 110435650    
Species sbi zma osa ath gma sly vvi ppo mtr bra nta cre hvu cit bdi sot tae bna ghi
Paralog 1 2 2 1 3 3 2 3 2 0 0 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0004842 [list] [network] ubiquitin-protein transferase activity  (328 genes)  IEA  
Protein XP_021317119.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 9,  mito 1  (predict for XP_021317119.1)
Subcellular
localization
TargetP
other 8  (predict for XP_021317119.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sbi-r.1
for
110435650

.
zma-u.5
for
100191868

.
zma-u.5
for
100191926

.
osa-u.5
for
9270248

.
osa-u.5
for
4334369

.
ath-u.5
for
RHF2A

.
gma-u.5
for
100803582

.
gma-u.5
for
100800419

.
gma-u.5
for
100780275

.
sly-u.5
for
101263219

.
sly-u.5
for
101243755

.
sly-u.5
for
101263713

.
vvi-u.5
for
100254749

.
vvi-u.5
for
100242721

.
ppo-u.5
for
7479486

.
ppo-u.5
for
7486664

.
ppo-u.5
for
7488073

.
mtr-u.5
for
25499520

.
mtr-u.5
for
11422637

.


Ortholog ID: 2503
Species ath gma gma sly sly osa osa zma bra bra vvi vvi ppo ppo mtr mtr tae tae hvu hvu ghi ghi bna bna sbi sbi sot sot cit cit bdi bdi nta nta
Symbol RHF2A LOC100814908 LOC100800419 LOC101263713 LOC101243755 LOC4334369 LOC9270248 LOC100191868 LOC103851418 LOC103845580 LOC100254749 LOC100242721 LOC7488073 LOC7479486 LOC25499520 LOC11422637 LOC123172620 LOC123052829 LOC123448438 LOC123426187 LOC107954231 LOC107906660 LOC106386962 LOC106419786 LOC110435650 LOC8061644 LOC102583355 LOC102590573 LOC102611988 LOC102622402 LOC100836678 LOC100833434 LOC107825171 LOC107774233
Function* RING-H2 group F2A E3 ubiquitin-protein ligase RHF2A E3 ubiquitin-protein ligase RHF2A-like E3 ubiquitin-protein ligase RHF2A E3 ubiquitin-protein ligase RHF2A E3 ubiquitin-protein ligase RHF2A E3 ubiquitin-protein ligase RHF2A uncharacterized LOC100191868 E3 ubiquitin-protein ligase RHF2A E3 ubiquitin-protein ligase RHF2A E3 ubiquitin-protein ligase-like E3 ubiquitin-protein ligase RHF2A E3 ubiquitin-protein ligase RHF2A E3 ubiquitin-protein ligase RHF2A E3 ubiquitin-protein ligase RHF2A E3 ubiquitin-protein ligase RHF2A E3 ubiquitin-protein ligase RHF2A E3 ubiquitin-protein ligase RHF2A E3 ubiquitin-protein ligase RHF2A E3 ubiquitin-protein ligase RHF2A-like E3 ubiquitin-protein ligase RHF2A E3 ubiquitin-protein ligase RHF2A E3 ubiquitin-protein ligase RHF2A E3 ubiquitin-protein ligase RHF2A E3 ubiquitin-protein ligase RHF2A-like E3 ubiquitin-protein ligase RHF2A E3 ubiquitin-protein ligase RHF2A E3 ubiquitin-protein ligase RHF2A-like E3 ubiquitin-protein ligase RHF2A-like E3 ubiquitin-protein ligase RHF2A E3 ubiquitin-protein ligase RHF2A E3 ubiquitin-protein ligase RHF2A E3 ubiquitin-protein ligase RHF2A E3 ubiquitin-protein ligase RHF2A
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04130 SNARE interactions in vesicular transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04141 Protein processing in endoplasmic reticulum 3
gma03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04120 Ubiquitin mediated proteolysis 3
gma03083 Polycomb repressive complex 2
gma04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04141 Protein processing in endoplasmic reticulum 2
zma03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo01210 2-Oxocarboxylic acid metabolism 2
ppo01230 Biosynthesis of amino acids 2
ppo04130 SNARE interactions in vesicular transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03015 mRNA surveillance pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03050 Proteasome 2
sbi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03083 Polycomb repressive complex 2
nta04144 Endocytosis 2
nta04148 Efferocytosis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 832260 100814908 100800419 101263713 101243755 4334369 9270248 100191868 103851418 103845580 100254749 100242721 7488073 7479486 25499520 11422637 123172620 123052829 123448438 123426187 107954231 107906660 106386962 106419786 110435650 8061644 102583355 102590573 102611988 102622402 100836678 100833434 107825171 107774233
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