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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-m.9   TGH   SWAP (Suppressor-of-White-APricot)/surp domain-containing protein 
 ath-u.5   TGH   SWAP (Suppressor-of-White-APricot)/surp domain-containing protein 
 ath-r.7   TGH   SWAP (Suppressor-of-White-APricot)/surp domain-containing protein 
 ath-e.2   TGH   SWAP (Suppressor-of-White-APricot)/surp domain-containing protein 
 ath-m.4.bio   TGH   SWAP (Suppressor-of-White-APricot)/surp domain-containing protein 
 ath-m.4.hor   TGH   SWAP (Suppressor-of-White-APricot)/surp domain-containing protein 
 ath-m.4.lig   TGH   SWAP (Suppressor-of-White-APricot)/surp domain-containing protein 
 ath-m.4.str   TGH   SWAP (Suppressor-of-White-APricot)/surp domain-containing protein 
 ath-m.4.tis   TGH   SWAP (Suppressor-of-White-APricot)/surp domain-containing protein 
 gma-u.5   100796934   G patch domain-containing protein TGH 
 gma-u.5   100500422   uncharacterized LOC100500422 
 vvi-u.5   100242404   G patch domain-containing protein TGH 
 ppo-u.5   7490080   G patch domain-containing protein TGH 
 mtr-u.5   11441585   G patch domain-containing protein TGH 
 sly-u.5   101243875   G patch domain-containing protein TGH 
 osa-u.5   4341077   G patch domain-containing protein TGH homolog 
 zma-u.5   103638373   G patch domain-containing protein TGH homolog 

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Top 50 coexpressed genes to TGH (ath-m.9 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to TGH (ath-m.9 coexpression data)

CoexMap"832372"


athTGH | Entrez gene ID : 832372      
Species ath gma vvi ppo mtr sly osa zma tae hvu ghi bdi cit bra cre sbi bna nta sot
Paralog 9 2 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0035196 [list] [network] miRNA processing  (30 genes)  IMP  
GO:0030422 [list] [network] siRNA processing  (31 genes)  IMP  
GO:0009734 [list] [network] auxin-activated signaling pathway  (65 genes)  IMP  
GO:0009926 [list] [network] auxin polar transport  (72 genes)  IMP  
GO:0010087 [list] [network] phloem or xylem histogenesis  (125 genes)  IMP  
GO:0006396 [list] [network] RNA processing  (588 genes)  TAS  
GO:0007275 [list] [network] multicellular organism development  (2630 genes)  IMP  
GO CC
GO:0005634 [list] [network] nucleus  (10367 genes)  IDA ISM  
GO MF
GO:0070883 [list] [network] pre-miRNA binding  (1 genes)  IDA  
GO:0070878 [list] [network] primary miRNA binding  (3 genes)  IDA  
GO:0003723 [list] [network] RNA binding  (1764 genes)  TAS  
GO:0005515 [list] [network] protein binding  (5363 genes)  IPI  
Protein NP_001031926.1 [sequence] [blastp]
NP_197699.2 [sequence] [blastp]
Subcellular
localization
wolf
nucl 10  (predict for NP_001031926.1)
nucl 10  (predict for NP_197699.2)
Subcellular
localization
TargetP
other 9  (predict for NP_001031926.1)
other 9  (predict for NP_197699.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-m.9
for
TGH

.
ath-u.5
for
TGH

.
ath-r.7
for
TGH

.
ath-e.2
for
TGH

.
ath-m.4.bio
for
TGH

.
ath-m.4.hor
for
TGH

.
ath-m.4.lig
for
TGH

.
ath-m.4.str
for
TGH

.
ath-m.4.tis
for
TGH

.
gma-u.5
for
100796934

.
gma-u.5
for
100500422

.
vvi-u.5
for
100242404

.
ppo-u.5
for
7490080

.
mtr-u.5
for
11441585

.
sly-u.5
for
101243875

.
osa-u.5
for
4341077

.
zma-u.5
for
103638373

.


Ortholog ID: 8617
Species ath gma gma sly osa zma bra bra vvi ppo mtr tae tae hvu ghi ghi bna bna cre sbi sot cit bdi nta nta
Symbol TGH LOC100796934 LOC100500422 LOC101243875 LOC4341077 LOC103638373 LOC103860531 LOC103837348 LOC100242404 LOC7490080 LOC11441585 LOC123164435 LOC123150748 LOC123412942 LOC107949739 LOC107887061 LOC106366057 LOC106374036 CHLRE_13g568700v5 LOC8078300 LOC102599029 LOC102624586 LOC100831112 LOC107808070 LOC107789035
Function* SWAP (Suppressor-of-White-APricot)/surp domain-containing protein G patch domain-containing protein TGH uncharacterized LOC100500422 G patch domain-containing protein TGH G patch domain-containing protein TGH homolog G patch domain-containing protein TGH homolog G patch domain-containing protein TGH G patch domain-containing protein TGH G patch domain-containing protein TGH G patch domain-containing protein TGH G patch domain-containing protein TGH G patch domain-containing protein TGH homolog G patch domain-containing protein TGH homolog G patch domain-containing protein TGH homolog G patch domain-containing protein TGH G patch domain-containing protein TGH G patch domain-containing protein TGH-like G patch domain-containing protein TGH uncharacterized protein G patch domain-containing protein TGH homolog G patch domain-containing protein TGH G patch domain-containing protein TGH G patch domain-containing protein TGH homolog G patch domain-containing protein TGH G patch domain-containing protein TGH
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03018 RNA degradation 2
gma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03022 Basal transcription factors 3
gma03013 Nucleocytoplasmic transport 2
gma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03015 mRNA surveillance pathway 2
bra03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03013 Nucleocytoplasmic transport 3
bra03008 Ribosome biogenesis in eukaryotes 3
bra03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03022 Basal transcription factors 2
tae03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03420 Nucleotide excision repair 2
ghi03460 Fanconi anemia pathway 2
ghi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03420 Nucleotide excision repair 2
ghi03460 Fanconi anemia pathway 2
ghi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03040 Spliceosome 3
sbi03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03040 Spliceosome 3
cit03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03013 Nucleocytoplasmic transport 4
bdi03040 Spliceosome 3
bdi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 832372 100796934 100500422 101243875 4341077 103638373 103860531 103837348 100242404 7490080 11441585 123164435 123150748 123412942 107949739 107887061 106366057 106374036 5719096 8078300 102599029 102624586 100831112 107808070 107789035
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