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Orthologous genes in OrthoFinder**

Species Gene Description
 vvi-u.5   100242404   G patch domain-containing protein TGH 
 vvi-r.5   100242404   G patch domain-containing protein TGH 
 ath-u.5   TGH   SWAP (Suppressor-of-White-APricot)/surp domain-containing protein 
 gma-u.5   100500422   uncharacterized LOC100500422 
 gma-u.5   100796934   G patch domain-containing protein TGH 
 ppo-u.5   7490080   G patch domain-containing protein TGH 
 mtr-u.5   11441585   G patch domain-containing protein TGH 
 sly-u.5   101243875   G patch domain-containing protein TGH 
 osa-u.5   4341077   G patch domain-containing protein TGH homolog 
 zma-u.5   103638373   G patch domain-containing protein TGH homolog 

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Top 50 coexpressed genes to 100242404 (vvi-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100242404 (vvi-u.5 coexpression data)

CoexMap"100242404"


vviLOC100242404 | Entrez gene ID : 100242404      
Species vvi ath gma ppo mtr sly osa zma bdi hvu bra cit bna sbi ghi sot nta cre tae
Paralog 2 1 2 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006397 [list] [network] mRNA processing  (186 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (2597 genes)  IEA  
GO MF
GO:0003723 [list] [network] RNA binding  (1286 genes)  IEA  
Protein XP_002271556.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 10  (predict for XP_002271556.1)
Subcellular
localization
TargetP
other 9  (predict for XP_002271556.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

vvi-u.5
for
100242404
vvi-r.5
for
100242404
ath-u.5
for
TGH
gma-u.5
for
100500422
gma-u.5
for
100796934
ppo-u.5
for
7490080
mtr-u.5
for
11441585
sly-u.5
for
101243875
osa-u.5
for
4341077
zma-u.5
for
103638373


Ortholog ID: 8617
Species vvi ath gma gma bra bra ppo mtr ghi ghi bna bna cit sly sot nta nta osa zma tae tae hvu sbi bdi cre
Symbol LOC100242404 TGH LOC100796934 LOC100500422 LOC103860531 LOC103837348 LOC7490080 LOC11441585 LOC107949739 LOC107887061 LOC106366057 LOC106374036 LOC102624586 LOC101243875 LOC102599029 LOC107808070 LOC107789035 LOC4341077 LOC103638373 LOC123164435 LOC123150748 LOC123412942 LOC8078300 LOC100831112 CHLRE_13g568700v5
Function* G patch domain-containing protein TGH SWAP (Suppressor-of-White-APricot)/surp domain-containing protein G patch domain-containing protein TGH uncharacterized LOC100500422 G patch domain-containing protein TGH G patch domain-containing protein TGH G patch domain-containing protein TGH G patch domain-containing protein TGH G patch domain-containing protein TGH G patch domain-containing protein TGH G patch domain-containing protein TGH-like G patch domain-containing protein TGH G patch domain-containing protein TGH G patch domain-containing protein TGH G patch domain-containing protein TGH G patch domain-containing protein TGH G patch domain-containing protein TGH G patch domain-containing protein TGH homolog G patch domain-containing protein TGH homolog G patch domain-containing protein TGH homolog G patch domain-containing protein TGH homolog G patch domain-containing protein TGH homolog G patch domain-containing protein TGH homolog G patch domain-containing protein TGH homolog uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03018 RNA degradation 2
gma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03022 Basal transcription factors 3
gma03013 Nucleocytoplasmic transport 2
gma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03015 mRNA surveillance pathway 2
bra03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03013 Nucleocytoplasmic transport 3
bra03008 Ribosome biogenesis in eukaryotes 3
bra03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03420 Nucleotide excision repair 2
ghi03460 Fanconi anemia pathway 2
ghi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03420 Nucleotide excision repair 2
ghi03460 Fanconi anemia pathway 2
ghi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03040 Spliceosome 3
cit03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03022 Basal transcription factors 2
tae03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03040 Spliceosome 3
sbi03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03013 Nucleocytoplasmic transport 4
bdi03040 Spliceosome 3
bdi03015 mRNA surveillance pathway 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100242404 832372 100796934 100500422 103860531 103837348 7490080 11441585 107949739 107887061 106366057 106374036 102624586 101243875 102599029 107808070 107789035 4341077 103638373 123164435 123150748 123412942 8078300 100831112 5719096
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