Select Species**


OK


Orthologous genes in OrthoFinder**

Species Gene Description
 ath-m.9   RPS4   Disease resistance protein (TIR-NBS-LRR class) family 
 ath-u.5   RPS4   Disease resistance protein (TIR-NBS-LRR class) family 
 ath-r.7   RPS4   Disease resistance protein (TIR-NBS-LRR class) family 
 ath-e.2   RPS4   Disease resistance protein (TIR-NBS-LRR class) family 
 ath-m.4.bio   RPS4   Disease resistance protein (TIR-NBS-LRR class) family 
 ath-m.4.hor   RPS4   Disease resistance protein (TIR-NBS-LRR class) family 
 ath-m.4.lig   RPS4   Disease resistance protein (TIR-NBS-LRR class) family 
 ath-m.4.str   RPS4   Disease resistance protein (TIR-NBS-LRR class) family 
 ath-m.4.tis   RPS4   Disease resistance protein (TIR-NBS-LRR class) family 
 ath-u.5   LAZ5   Disease resistance protein (TIR-NBS-LRR class) family 
 ath-u.5   AT5G45060   Disease resistance protein (TIR-NBS-LRR class) family 
 bra-r.6   103839132   disease resistance protein RPS4 
 bna-r.1   106418634   disease resistance protein RPS4-like 
 bna-r.1   106426126   disease resistance-like protein CSA1 
 bna-r.1   106437687   disease resistance protein RPS4-like 

close


Top 50 coexpressed genes to RPS4 (ath-m.9 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

close

close

Top 50 enrichment test to RPS4 (ath-m.9 coexpression data)

CoexMap"834561"


athRPS4 | Entrez gene ID : 834561      
Species ath bra bna vvi bdi ppo sbi gma ghi cit hvu sot sly nta osa tae zma cre mtr
Paralog 11 1 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG ath04626 [list] [network] Plant-pathogen interaction (216 genes)
GO BP
GO:0002758 [list] [network] innate immune response-activating signaling pathway  (42 genes)  IDA  
GO:0009626 [list] [network] plant-type hypersensitive response  (54 genes)  IMP  
GO:0042742 [list] [network] defense response to bacterium  (363 genes)  IDA  
GO:0006952 [list] [network] defense response  (1016 genes)  TAS  
GO CC
GO:0012505 [list] [network] endomembrane system  (2163 genes)  IDA  
GO:0016020 [list] [network] membrane  (3740 genes)  ISS  
GO:0005634 [list] [network] nucleus  (10367 genes)  IDA  
GO:0005737 [list] [network] cytoplasm  (14000 genes)  ISM  
GO MF
GO:0061809 [list] [network] NAD+ nucleosidase activity, cyclic ADP-ribose generating  (32 genes)  IEA  
GO:0043531 [list] [network] ADP binding  (164 genes)  IEA  
GO:0042802 [list] [network] identical protein binding  (414 genes)  IPI  
GO:0005515 [list] [network] protein binding  (5363 genes)  IPI  
Protein NP_199338.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 4,  cyto 4,  chlo 1,  plas 1,  cysk 1,  cysk_plas 1  (predict for NP_199338.1)
Subcellular
localization
TargetP
other 8  (predict for NP_199338.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-m.9
for
RPS4
ath-u.5
for
RPS4
ath-r.7
for
RPS4
ath-e.2
for
RPS4
ath-m.4.bio
for
RPS4
ath-m.4.hor
for
RPS4
ath-m.4.lig
for
RPS4
ath-m.4.str
for
RPS4
ath-m.4.tis
for
RPS4
ath-u.5
for
LAZ5
ath-u.5
for
AT5G45060
bra-r.6
for
103839132
bna-r.1
for
106418634
bna-r.1
for
106426126
bna-r.1
for
106437687


Ortholog ID: 15227
Species ath ath ath bra bna bna
Symbol RPS4 LAZ5 AT5G45060 LOC103839132 LOC106426126 LOC106437687
Function* Disease resistance protein (TIR-NBS-LRR class) family Disease resistance protein (TIR-NBS-LRR class) family Disease resistance protein (TIR-NBS-LRR class) family disease resistance protein RPS4 disease resistance-like protein CSA1 disease resistance protein RPS4-like
Coexmap

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
Coexpression

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04626 Plant-pathogen interaction 2
ath03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04070 Phosphatidylinositol signaling system 2
bra04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00760 Nicotinate and nicotinamide metabolism 2
bna01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04626 Plant-pathogen interaction 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 834561 834517 834537 103839132 106426126 106437687
The preparation time of this page was 2.8 [sec].