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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-m.9   AT5G47930   Zinc-binding ribosomal protein family protein 
 ath-u.5   AT5G47930   Zinc-binding ribosomal protein family protein 
 ath-r.7   AT5G47930   Zinc-binding ribosomal protein family protein 
 ath-e.2   AT5G47930   Zinc-binding ribosomal protein family protein 
 ath-m.4.bio   AT5G47930   Zinc-binding ribosomal protein family protein 
 ath-m.4.hor   AT5G47930   Zinc-binding ribosomal protein family protein 
 ath-m.4.lig   AT5G47930   Zinc-binding ribosomal protein family protein 
 ath-m.4.str   AT5G47930   Zinc-binding ribosomal protein family protein 
 ath-m.4.tis   AT5G47930   Zinc-binding ribosomal protein family protein 
 ath-u.5   AT2G45710   Zinc-binding ribosomal protein family protein 
 ath-u.5   RS27A   ribosomal protein S27 
 bra-r.6   103830282   40S ribosomal protein S27-2 
 bra-r.6   103837236   40S ribosomal protein S27-2 
 bra-r.6   103841933   40S ribosomal protein S27-2 
 bna-r.1   106392667   40S ribosomal protein S27-1-like 
 bna-r.1   106399308   40S ribosomal protein S27-2 
 bna-r.1   106413719   40S ribosomal protein S27-2 
 ghi-r.1   107915457   40S ribosomal protein S27-2 
 ghi-r.1   107893279   40S ribosomal protein S27-2 
 ghi-r.1   107894303   40S ribosomal protein S27-2 
 cit-r.1   127898633   40S ribosomal protein S27-2 
 cit-r.1   102608679   40S ribosomal protein S27-2 
 gma-u.5   100809054   40S ribosomal protein S27-2 
 gma-u.5   100499804   uncharacterized LOC100499804 
 gma-u.5   100776354   40S ribosomal protein S27-2 
 vvi-u.5   100248991   40S ribosomal protein S27-2-like 
 vvi-u.5   100248037   small ribosomal subunit protein eS27y 
 ppo-u.5   7491442   40S ribosomal protein S27-2 
 ppo-u.5   7496522   40S ribosomal protein S27-2 
 ppo-u.5   18100591   40S ribosomal protein S27-2 
 mtr-u.5   25485569   40S ribosomal protein S27-2 
 mtr-u.5   11446844   40S ribosomal protein S27-2 
 mtr-u.5   25486284   40S ribosomal protein S27-2 
 sly-u.5   101252403   small ribosomal subunit protein eS27z-like 
 sly-u.5   101247355   small ribosomal subunit protein eS27y 
 sot-r.1   102587483   40S ribosomal protein S27-3-like 
 nta-r.1   107821823   small ribosomal subunit protein eS27w 
 nta-r.1   107784453   small ribosomal subunit protein eS27y 
 nta-r.1   107808463   small ribosomal subunit protein eS27w 
 osa-u.5   107277301   small ribosomal subunit protein eS27 
 osa-u.5   4335531   40S ribosomal protein S27 
 osa-u.5   4329362   small ribosomal subunit protein eS27 
 zma-u.5   103627157   40S ribosomal protein S27 
 zma-u.5   103625888   40S ribosomal protein S27 
 zma-u.5   542617   ribosomal protein S27 
 tae-r.2   123096162   40S ribosomal protein S27 
 tae-r.2   123084822   40S ribosomal protein S27 
 tae-r.2   123165679   40S ribosomal protein S27 
 hvu-r.1   123407554   40S ribosomal protein S27 
 hvu-r.1   123449528   40S ribosomal protein S27 
 hvu-r.1   123447807   40S ribosomal protein S27 
 sbi-r.1   8084522   40S ribosomal protein S27 
 sbi-r.1   8060477   40S ribosomal protein S27 
 sbi-r.1   8085945   40S ribosomal protein S27 
 bdi-r.1   100843921   40S ribosomal protein S27 
 bdi-r.1   100839931   40S ribosomal protein S27 
 cre-r.1   CHLRE_12g529400v5   ribosomal protein S27 isoform A 
 cre-r.1   CHLRE_02g145250v5   ribosomal protein S27 isoform B 

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Top 50 coexpressed genes to AT5G47930 (ath-m.9 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to AT5G47930 (ath-m.9 coexpression data)

CoexMap"834844"


athAT5G47930 | Entrez gene ID : 834844    
Species ath bra bna ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 11 3 3 3 2 3 2 3 3 2 1 3 3 3 3 3 3 2 2
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG ath03010 [list] [network] Ribosome (394 genes)
GO BP
GO CC
GO:0022627 [list] [network] cytosolic small ribosomal subunit  (93 genes)  HDA  
GO:0022626 [list] [network] cytosolic ribosome  (295 genes)  HDA  
GO:0009536 [list] [network] plastid  (5443 genes)  HDA  
GO:0005737 [list] [network] cytoplasm  (14000 genes)  ISM  
GO MF
GO:0003729 [list] [network] mRNA binding  (1514 genes)  IDA  
Protein NP_199604.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 6,  nucl 2,  mito 1,  plas 1,  extr 1,  mito_plas 1  (predict for NP_199604.1)
Subcellular
localization
TargetP
other 8  (predict for NP_199604.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-m.9
for
AT5G47930
ath-u.5
for
AT5G47930
ath-r.7
for
AT5G47930
ath-e.2
for
AT5G47930
ath-m.4.bio
for
AT5G47930
ath-m.4.hor
for
AT5G47930
ath-m.4.lig
for
AT5G47930
ath-m.4.str
for
AT5G47930
ath-m.4.tis
for
AT5G47930
ath-u.5
for
AT2G45710
ath-u.5
for
RS27A
bra-r.6
for
103830282
bra-r.6
for
103837236
bra-r.6
for
103841933
bna-r.1
for
106392667
bna-r.1
for
106399308
bna-r.1
for
106413719
ghi-r.1
for
107915457
ghi-r.1
for
107893279
ghi-r.1
for
107894303
cit-r.1
for
127898633
cit-r.1
for
102608679
gma-u.5
for
100809054
gma-u.5
for
100499804
gma-u.5
for
100776354
vvi-u.5
for
100248991
vvi-u.5
for
100248037
ppo-u.5
for
7491442
ppo-u.5
for
7496522
ppo-u.5
for
18100591
mtr-u.5
for
25485569
mtr-u.5
for
11446844
mtr-u.5
for
25486284
sly-u.5
for
101252403
sly-u.5
for
101247355
sot-r.1
for
102587483
nta-r.1
for
107821823
nta-r.1
for
107784453
nta-r.1
for
107808463
osa-u.5
for
107277301
osa-u.5
for
4335531
osa-u.5
for
4329362
zma-u.5
for
103627157
zma-u.5
for
103625888
zma-u.5
for
542617
tae-r.2
for
123096162
tae-r.2
for
123084822
tae-r.2
for
123165679
hvu-r.1
for
123407554
hvu-r.1
for
123449528
hvu-r.1
for
123447807
sbi-r.1
for
8084522
sbi-r.1
for
8060477
sbi-r.1
for
8085945
bdi-r.1
for
100843921
bdi-r.1
for
100839931
cre-r.1
for
CHLRE_12g529400v5
cre-r.1
for
CHLRE_02g145250v5


Ortholog ID: 1124
Species ath ath bra bra bra bna bna bna ghi ghi ghi cit cit gma gma gma vvi vvi ppo ppo ppo mtr mtr mtr sly sly sot sot nta nta nta osa osa osa zma zma zma tae tae tae hvu hvu hvu sbi sbi sbi bdi bdi cre cre
Symbol AT5G47930 RS27A LOC103830282 LOC103837236 LOC103858186 LOC106399308 LOC106415163 LOC106428973 LOC107893279 LOC107894303 LOC121232136 LOC127898633 LOC102608679 LOC100809054 LOC100499804 LOC100306318 LOC100248991 LOC100248037 LOC7491442 LOC7496522 LOC18100591 LOC25485569 LOC11446844 LOC25486284 LOC101252403 LOC101247355 LOC102587483 LOC102600252 LOC107784453 LOC107808463 LOC107808170 LOC107277301 LOC4335531 LOC4329362 LOC103627157 LOC103625888 LOC542617 LOC123096162 LOC123084822 LOC123093263 LOC123407554 LOC123449528 LOC123447807 LOC8084522 LOC8060477 LOC8085945 LOC100843921 LOC100839931 CHLRE_12g529400v5 CHLRE_02g145250v5
Function* Zinc-binding ribosomal protein family protein ribosomal protein S27 40S ribosomal protein S27-2 40S ribosomal protein S27-2 40S ribosomal protein S27-2 40S ribosomal protein S27-2 40S ribosomal protein S27-2 40S ribosomal protein S27-2 40S ribosomal protein S27-2 40S ribosomal protein S27-2 40S ribosomal protein S27-2 40S ribosomal protein S27-2 40S ribosomal protein S27-2 40S ribosomal protein S27-2 uncharacterized LOC100499804 40S ribosomal protein S27 40S ribosomal protein S27-2-like small ribosomal subunit protein eS27y 40S ribosomal protein S27-2 40S ribosomal protein S27-2 40S ribosomal protein S27-2 40S ribosomal protein S27-2 40S ribosomal protein S27-2 40S ribosomal protein S27-2 small ribosomal subunit protein eS27z-like small ribosomal subunit protein eS27y 40S ribosomal protein S27-3-like 40S ribosomal protein S27-2 small ribosomal subunit protein eS27y small ribosomal subunit protein eS27w small ribosomal subunit protein eS27y small ribosomal subunit protein eS27 40S ribosomal protein S27 small ribosomal subunit protein eS27 40S ribosomal protein S27 40S ribosomal protein S27 ribosomal protein S27 40S ribosomal protein S27 40S ribosomal protein S27 40S ribosomal protein S27 40S ribosomal protein S27 40S ribosomal protein S27 40S ribosomal protein S27 40S ribosomal protein S27 40S ribosomal protein S27 40S ribosomal protein S27 40S ribosomal protein S27 40S ribosomal protein S27 ribosomal protein S27 isoform A ribosomal protein S27 isoform B
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 16
bra03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 5
bra03008 Ribosome biogenesis in eukaryotes 2
bra03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 6
bna03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 7
bna03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 9
ghi04120 Ubiquitin mediated proteolysis 4
ghi04141 Protein processing in endoplasmic reticulum 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 15
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 15
gma03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 9
gma03040 Spliceosome 3
gma03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 16
gma03008 Ribosome biogenesis in eukaryotes 3
gma03013 Nucleocytoplasmic transport 2
gma03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 15
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 20
ppo04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 15
mtr04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 13
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 11
sot03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 15
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 15
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 2
nta00592 alpha-Linolenic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 13
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 15
tae03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 13
tae03018 RNA degradation 3
tae03040 Spliceosome 3
tae03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 10
tae03008 Ribosome biogenesis in eukaryotes 4
tae03018 RNA degradation 3
tae03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 13
hvu04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 21
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre04136 Autophagy - other 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 834844 825283 103830282 103837236 103858186 106399308 106415163 106428973 107893279 107894303 121232136 127898633 102608679 100809054 100499804 100306318 100248991 100248037 7491442 7496522 18100591 25485569 11446844 25486284 101252403 101247355 102587483 102600252 107784453 107808463 107808170 107277301 4335531 4329362 103627157 103625888 542617 123096162 123084822 123093263 123407554 123449528 123447807 8084522 8060477 8085945 100843921 100839931 5722425 5720499
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