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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-m.9   AT5G48940   Leucine-rich repeat transmembrane protein kinase family protein 
 ath-u.5   AT5G48940   Leucine-rich repeat transmembrane protein kinase family protein 
 ath-r.7   AT5G48940   Leucine-rich repeat transmembrane protein kinase family protein 
 ath-e.2   AT5G48940   Leucine-rich repeat transmembrane protein kinase family protein 
 ath-m.4.bio   AT5G48940   Leucine-rich repeat transmembrane protein kinase family protein 
 ath-m.4.hor   AT5G48940   Leucine-rich repeat transmembrane protein kinase family protein 
 ath-m.4.lig   AT5G48940   Leucine-rich repeat transmembrane protein kinase family protein 
 ath-m.4.str   AT5G48940   Leucine-rich repeat transmembrane protein kinase family protein 
 ath-m.4.tis   AT5G48940   Leucine-rich repeat transmembrane protein kinase family protein 
 ath-u.5   AT3G24240   Leucine-rich repeat receptor-like protein kinase family protein 
 bra-r.6   103828690   receptor-like protein kinase 2 
 bna-r.1   111213902   LRR receptor-like serine/threonine-protein kinase RGI2 
 bna-r.1   106450592   LRR receptor-like serine/threonine-protein kinase RGI1 
 ghi-r.1   107897012   LRR receptor-like serine/threonine-protein kinase RGI1 
 ghi-r.1   107952712   LRR receptor-like serine/threonine-protein kinase RGI2 
 ghi-r.1   107954929   LRR receptor-like serine/threonine-protein kinase RGI2 
 gma-u.5   100815339   LRR receptor-like serine/threonine-protein kinase RGI2 
 gma-u.5   100794698   LRR receptor-like serine/threonine-protein kinase RGI2 
 gma-u.5   100792614   LRR receptor-like serine/threonine-protein kinase RGI1 
 mtr-u.5   112421961   receptor-like protein kinase 2 
 mtr-u.5   25498435   LRR receptor-like serine/threonine-protein kinase RCH1 
 sly-u.5   101267937   leucine-rich repeat receptor kinase RGFR1-like protein 
 sot-r.1   102595331   LRR receptor-like serine/threonine-protein kinase RCH1 
 sot-r.1   102591961   receptor-like protein kinase 2 
 nta-r.1   107831853   uncharacterized LOC107831853 
 nta-r.1   107811435   uncharacterized LOC107811435 
 nta-r.1   107795167   uncharacterized LOC107795167 
 osa-u.5   4335004   LRR receptor-like serine/threonine-protein kinase RGI2 
 zma-u.5   103641486   LRR receptor-like serine/threonine-protein kinase RCH1 
 tae-r.2   123186953   LRR receptor-like serine/threonine-protein kinase RGI1 
 tae-r.2   123050996   LRR receptor-like serine/threonine-protein kinase RGI1 
 tae-r.2   123043101   LRR receptor-like serine/threonine-protein kinase RGI1 
 hvu-r.1   123431499   LRR receptor-like serine/threonine-protein kinase RGI1 
 sbi-r.1   8065989   receptor-like protein kinase 2 
 bdi-r.1   100843123   receptor-like protein kinase 2 

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Top 50 coexpressed genes to AT5G48940 (ath-m.9 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to AT5G48940 (ath-m.9 coexpression data)

CoexMap"834952"


athAT5G48940 | Entrez gene ID : 834952      
Species ath bra bna ghi gma mtr sly sot nta osa zma tae hvu sbi bdi vvi ppo cre cit
Paralog 10 1 2 3 3 2 1 2 3 1 1 3 1 1 1 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0010449 [list] [network] root meristem growth  (16 genes)  IGI  
GO:0010078 [list] [network] maintenance of root meristem identity  (40 genes)  IMP  
GO:0010082 [list] [network] regulation of root meristem growth  (44 genes)  IGI  
GO:2000280 [list] [network] regulation of root development  (79 genes)  IMP  
GO:0006468 [list] [network] protein phosphorylation  (345 genes)  IEA  
GO CC
GO:0005886 [list] [network] plasma membrane  (2598 genes)  ISM  
GO MF
GO:0001653 [list] [network] peptide receptor activity  (19 genes)  IGI IMP  
GO:0042277 [list] [network] peptide binding  (30 genes)  IPI  
GO:0044024 [list] [network] histone H2AS1 kinase activity  (63 genes)  IEA  
GO:0005524 [list] [network] ATP binding  (321 genes)  IEA  
GO:0004674 [list] [network] protein serine/threonine kinase activity  (433 genes)  IEA  
GO:0004672 [list] [network] protein kinase activity  (737 genes)  IEA  
GO:0005515 [list] [network] protein binding  (5363 genes)  IPI  
Protein NP_199705.2 [sequence] [blastp]
Subcellular
localization
wolf
plas 3,  vacu 3,  chlo 1,  E.R. 1,  golg_plas 1,  cysk_plas 1,  mito_plas 1,  cyto_plas 1  (predict for NP_199705.2)
Subcellular
localization
TargetP
scret 2  (predict for NP_199705.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-m.9
for
AT5G48940
ath-u.5
for
AT5G48940
ath-r.7
for
AT5G48940
ath-e.2
for
AT5G48940
ath-m.4.bio
for
AT5G48940
ath-m.4.hor
for
AT5G48940
ath-m.4.lig
for
AT5G48940
ath-m.4.str
for
AT5G48940
ath-m.4.tis
for
AT5G48940
ath-u.5
for
AT3G24240
bra-r.6
for
103828690
bna-r.1
for
111213902
bna-r.1
for
106450592
ghi-r.1
for
107897012
ghi-r.1
for
107952712
ghi-r.1
for
107954929
gma-u.5
for
100815339
gma-u.5
for
100794698
gma-u.5
for
100792614
mtr-u.5
for
112421961
mtr-u.5
for
25498435
sly-u.5
for
101267937
sot-r.1
for
102595331
sot-r.1
for
102591961
nta-r.1
for
107831853
nta-r.1
for
107811435
nta-r.1
for
107795167
osa-u.5
for
4335004
zma-u.5
for
103641486
tae-r.2
for
123186953
tae-r.2
for
123050996
tae-r.2
for
123043101
hvu-r.1
for
123431499
sbi-r.1
for
8065989
bdi-r.1
for
100843123


Ortholog ID: 4734
Species ath ath bra bna bna ghi ghi ghi gma gma gma mtr mtr sly sot sot nta nta nta osa zma tae tae tae hvu sbi bdi
Symbol AT5G48940 AT3G24240 LOC103828690 LOC111213902 LOC106404486 LOC107897012 LOC107952712 LOC107915065 LOC100794698 LOC100792614 LOC100818541 LOC112421961 LOC25498435 LOC101267937 LOC102595331 LOC102591961 LOC107831853 LOC107811435 LOC107768501 LOC4335004 LOC103641486 LOC123186953 LOC123050996 LOC123043101 LOC123431499 LOC8065989 LOC100843123
Function* Leucine-rich repeat transmembrane protein kinase family protein Leucine-rich repeat receptor-like protein kinase family protein receptor-like protein kinase 2 LRR receptor-like serine/threonine-protein kinase RGI2 LRR receptor-like serine/threonine-protein kinase RGI1 LRR receptor-like serine/threonine-protein kinase RGI1 LRR receptor-like serine/threonine-protein kinase RGI2 LRR receptor-like serine/threonine-protein kinase RGI1 LRR receptor-like serine/threonine-protein kinase RGI2 LRR receptor-like serine/threonine-protein kinase RGI1 LRR receptor-like serine/threonine-protein kinase RGI1 receptor-like protein kinase 2 LRR receptor-like serine/threonine-protein kinase RCH1 leucine-rich repeat receptor kinase RGFR1-like protein LRR receptor-like serine/threonine-protein kinase RCH1 receptor-like protein kinase 2 uncharacterized LOC107831853 uncharacterized LOC107811435 uncharacterized LOC107768501 LRR receptor-like serine/threonine-protein kinase RGI2 LRR receptor-like serine/threonine-protein kinase RCH1 LRR receptor-like serine/threonine-protein kinase RGI1 LRR receptor-like serine/threonine-protein kinase RGI1 LRR receptor-like serine/threonine-protein kinase RGI1 LRR receptor-like serine/threonine-protein kinase RGI1 receptor-like protein kinase 2 receptor-like protein kinase 2
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00908 Zeatin biosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00290 Valine, leucine and isoleucine biosynthesis 2
ghi00650 Butanoate metabolism 2
ghi00660 C5-Branched dibasic acid metabolism 2
ghi00770 Pantothenate and CoA biosynthesis 2
ghi01210 2-Oxocarboxylic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00940 Phenylpropanoid biosynthesis 2
sot04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00940 Phenylpropanoid biosynthesis 3
sot00941 Flavonoid biosynthesis 2
sot00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta02010 ABC transporters 4
nta04981 Folate transport and metabolism 4
nta00260 Glycine, serine and threonine metabolism 4
nta00350 Tyrosine metabolism 4
nta00360 Phenylalanine metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00260 Glycine, serine and threonine metabolism 4
nta00350 Tyrosine metabolism 4
nta00360 Phenylalanine metabolism 4
nta00410 beta-Alanine metabolism 4
nta00950 Isoquinoline alkaloid biosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta02010 ABC transporters 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00940 Phenylpropanoid biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00940 Phenylpropanoid biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00940 Phenylpropanoid biosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03030 DNA replication 5
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 834952 822011 103828690 111213902 106404486 107897012 107952712 107915065 100794698 100792614 100818541 112421961 25498435 101267937 102595331 102591961 107831853 107811435 107768501 4335004 103641486 123186953 123050996 123043101 123431499 8065989 100843123
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