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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5   AT5G48940   Leucine-rich repeat transmembrane protein kinase family protein 
 ath-r.7   AT5G48940   Leucine-rich repeat transmembrane protein kinase family protein 
 ath-m.9   AT5G48940   Leucine-rich repeat transmembrane protein kinase family protein 
 ath-e.2   AT5G48940   Leucine-rich repeat transmembrane protein kinase family protein 
 ath-m.4.bio   AT5G48940   Leucine-rich repeat transmembrane protein kinase family protein 
 ath-m.4.hor   AT5G48940   Leucine-rich repeat transmembrane protein kinase family protein 
 ath-m.4.lig   AT5G48940   Leucine-rich repeat transmembrane protein kinase family protein 
 ath-m.4.str   AT5G48940   Leucine-rich repeat transmembrane protein kinase family protein 
 ath-m.4.tis   AT5G48940   Leucine-rich repeat transmembrane protein kinase family protein 
 ath-u.5   AT3G24240   Leucine-rich repeat receptor-like protein kinase family protein 
 gma-u.5   100815339   LRR receptor-like serine/threonine-protein kinase RGI2 
 gma-u.5   100794698   LRR receptor-like serine/threonine-protein kinase RGI2 
 gma-u.5   100792614   LRR receptor-like serine/threonine-protein kinase RGI1 
 mtr-u.5   112421961   receptor-like protein kinase 2 
 mtr-u.5   25498435   LRR receptor-like serine/threonine-protein kinase RCH1 
 sly-u.5   101267937   leucine-rich repeat receptor kinase RGFR1-like protein 
 osa-u.5   4335004   LRR receptor-like serine/threonine-protein kinase RGI2 
 zma-u.5   103641486   LRR receptor-like serine/threonine-protein kinase RCH1 

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Top 50 coexpressed genes to AT5G48940 (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to AT5G48940 (ath-u.5 coexpression data)

CoexMap"834952"


athAT5G48940 | Entrez gene ID : 834952      
Species ath gma mtr sly osa zma sbi nta bra cre vvi cit hvu ppo bdi sot tae bna ghi
Paralog 10 3 2 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0010449 [list] [network] root meristem growth  (16 genes)  IGI  
GO:0010078 [list] [network] maintenance of root meristem identity  (40 genes)  IMP  
GO:0010082 [list] [network] regulation of root meristem growth  (44 genes)  IGI  
GO:2000280 [list] [network] regulation of root development  (79 genes)  IMP  
GO:0006468 [list] [network] protein phosphorylation  (345 genes)  IEA  
GO CC
GO:0005886 [list] [network] plasma membrane  (2598 genes)  ISM  
GO MF
GO:0001653 [list] [network] peptide receptor activity  (19 genes)  IGI IMP  
GO:0042277 [list] [network] peptide binding  (30 genes)  IPI  
GO:0044024 [list] [network] histone H2AS1 kinase activity  (63 genes)  IEA  
GO:0005524 [list] [network] ATP binding  (321 genes)  IEA  
GO:0004674 [list] [network] protein serine/threonine kinase activity  (433 genes)  IEA  
GO:0004672 [list] [network] protein kinase activity  (737 genes)  IEA  
GO:0005515 [list] [network] protein binding  (5363 genes)  IPI  
Protein NP_199705.2 [sequence] [blastp]
Subcellular
localization
wolf
plas 3,  vacu 3,  chlo 1,  E.R. 1,  golg_plas 1,  cysk_plas 1,  mito_plas 1,  cyto_plas 1  (predict for NP_199705.2)
Subcellular
localization
TargetP
scret 2  (predict for NP_199705.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-u.5
for
AT5G48940

.
ath-r.7
for
AT5G48940

.
ath-m.9
for
AT5G48940

.
ath-e.2
for
AT5G48940

.
ath-m.4.bio
for
AT5G48940

.
ath-m.4.hor
for
AT5G48940

.
ath-m.4.lig
for
AT5G48940

.
ath-m.4.str
for
AT5G48940

.
ath-m.4.tis
for
AT5G48940

.
ath-u.5
for
AT3G24240

.
gma-u.5
for
100815339

.
gma-u.5
for
100794698

.
gma-u.5
for
100792614

.
mtr-u.5
for
112421961

.
mtr-u.5
for
25498435

.
sly-u.5
for
101267937

.
osa-u.5
for
4335004

.
zma-u.5
for
103641486

.


Ortholog ID: 4734
Species ath ath gma gma sly osa zma bra mtr mtr tae tae hvu ghi ghi bna sbi sot sot bdi nta nta
Symbol AT5G48940 AT3G24240 LOC100792614 LOC100794698 LOC101267937 LOC4335004 LOC103641486 LOC103828690 LOC25498435 LOC112421961 LOC123186953 LOC123043101 LOC123431499 LOC107915065 LOC107952712 LOC111213902 LOC8065989 LOC102595331 LOC102591961 LOC100843123 LOC107831853 LOC107811435
Function* Leucine-rich repeat transmembrane protein kinase family protein Leucine-rich repeat receptor-like protein kinase family protein LRR receptor-like serine/threonine-protein kinase RGI1 LRR receptor-like serine/threonine-protein kinase RGI2 leucine-rich repeat receptor kinase RGFR1-like protein LRR receptor-like serine/threonine-protein kinase RGI2 LRR receptor-like serine/threonine-protein kinase RCH1 receptor-like protein kinase 2 LRR receptor-like serine/threonine-protein kinase RCH1 receptor-like protein kinase 2 LRR receptor-like serine/threonine-protein kinase RGI1 LRR receptor-like serine/threonine-protein kinase RGI1 LRR receptor-like serine/threonine-protein kinase RGI1 LRR receptor-like serine/threonine-protein kinase RGI1 LRR receptor-like serine/threonine-protein kinase RGI2 LRR receptor-like serine/threonine-protein kinase RGI2 receptor-like protein kinase 2 LRR receptor-like serine/threonine-protein kinase RCH1 receptor-like protein kinase 2 receptor-like protein kinase 2 uncharacterized LOC107831853 uncharacterized LOC107811435
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00940 Phenylpropanoid biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00940 Phenylpropanoid biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00290 Valine, leucine and isoleucine biosynthesis 2
ghi00650 Butanoate metabolism 2
ghi00660 C5-Branched dibasic acid metabolism 2
ghi00770 Pantothenate and CoA biosynthesis 2
ghi01210 2-Oxocarboxylic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00940 Phenylpropanoid biosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00940 Phenylpropanoid biosynthesis 2
sot04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00940 Phenylpropanoid biosynthesis 3
sot00941 Flavonoid biosynthesis 2
sot00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03030 DNA replication 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta02010 ABC transporters 4
nta04981 Folate transport and metabolism 4
nta00260 Glycine, serine and threonine metabolism 4
nta00350 Tyrosine metabolism 4
nta00360 Phenylalanine metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00260 Glycine, serine and threonine metabolism 4
nta00350 Tyrosine metabolism 4
nta00360 Phenylalanine metabolism 4
nta00410 beta-Alanine metabolism 4
nta00950 Isoquinoline alkaloid biosynthesis 4
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 834952 822011 100792614 100794698 101267937 4335004 103641486 103828690 25498435 112421961 123186953 123043101 123431499 107915065 107952712 111213902 8065989 102595331 102591961 100843123 107831853 107811435
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