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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-m.9   AT5G51980   Transducin/WD40 repeat-like superfamily protein 
 ath-u.5   AT5G51980   Transducin/WD40 repeat-like superfamily protein 
 ath-r.7   AT5G51980   Transducin/WD40 repeat-like superfamily protein 
 ath-e.2   AT5G51980   Transducin/WD40 repeat-like superfamily protein 
 ath-m.4.bio   AT5G51980   Transducin/WD40 repeat-like superfamily protein 
 ath-m.4.hor   AT5G51980   Transducin/WD40 repeat-like superfamily protein 
 ath-m.4.lig   AT5G51980   Transducin/WD40 repeat-like superfamily protein 
 ath-m.4.str   AT5G51980   Transducin/WD40 repeat-like superfamily protein 
 ath-m.4.tis   AT5G51980   Transducin/WD40 repeat-like superfamily protein 
 ath-u.5   ZFWD1   zinc finger WD40 repeat protein 1 
 ath-u.5   AT5G40880   WD-40 repeat family protein / zfwd3 protein (ZFWD3) 
 bra-r.6   103833487   zinc finger CCCH domain-containing protein 63 
 bra-r.6   103863980   zinc finger CCCH domain-containing protein 59 
 bra-r.6   103863258   zinc finger CCCH domain-containing protein 48 
 bna-r.1   125607927   zinc finger CCCH domain-containing protein 59-like 
 bna-r.1   106347093   zinc finger CCCH domain-containing protein 48 
 ghi-r.1   107947281   zinc finger CCCH domain-containing protein 63 
 ghi-r.1   107915377   zinc finger CCCH domain-containing protein 62 
 ghi-r.1   121211219   zinc finger CCCH domain-containing protein 63 
 cit-r.1   102613916   zinc finger CCCH domain-containing protein 48-like 
 cit-r.1   102615090   zinc finger CCCH domain-containing protein 48 
 cit-r.1   107175478   zinc finger CCCH domain-containing protein 17-like 
 gma-u.5   100775542   zinc finger CCCH domain-containing protein 48 
 ppo-u.5   7482113   zinc finger CCCH domain-containing protein 48 
 ppo-u.5   7464908   zinc finger CCCH domain-containing protein 48 
 ppo-u.5   7474016   zinc finger CCCH domain-containing protein 48 
 mtr-u.5   25500966   uncharacterized LOC25500966 
 mtr-u.5   25500839   zinc finger CCCH domain-containing protein 48 
 mtr-u.5   25497231   zinc finger CCCH domain-containing protein 48 
 sly-u.5   101261301   zinc finger CCCH domain-containing protein 48 
 sot-r.1   102593039   zinc finger CCCH domain-containing protein 48 
 nta-r.1   107791503   zinc finger CCCH domain-containing protein 48-like 
 nta-r.1   107828246   zinc finger CCCH domain-containing protein 48 
 osa-u.5   9271844   zinc finger CCCH domain-containing protein 17-like 
 osa-u.5   4325667   zinc finger CCCH domain-containing protein 17-like 
 zma-u.5   100502220   Zinc finger CCCH domain-containing protein 59 
 zma-u.5   100192554   nucleic acid binding protein 
 tae-r.2   123077447   zinc finger CCCH domain-containing protein 17 
 hvu-r.1   123408068   zinc finger CCCH domain-containing protein 17-like 
 hvu-r.1   123442917   zinc finger CCCH domain-containing protein 17-like 
 sbi-r.1   8073221   zinc finger CCCH domain-containing protein 17 
 sbi-r.1   8078741   zinc finger CCCH domain-containing protein 17 
 bdi-r.1   100845392   zinc finger CCCH domain-containing protein 17 
 bdi-r.1   100833053   zinc finger CCCH domain-containing protein 17 
 cre-r.1   CHLRE_12g510150v5   uncharacterized protein 

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Top 50 coexpressed genes to AT5G51980 (ath-m.9 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to AT5G51980 (ath-m.9 coexpression data)

CoexMap"835273"


athAT5G51980 | Entrez gene ID : 835273      
Species ath bra bna ghi cit gma ppo mtr sly sot nta osa zma tae hvu sbi bdi cre vvi
Paralog 11 3 2 3 3 1 3 3 1 1 2 2 2 1 2 2 2 1 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0003729 [list] [network] mRNA binding  (1514 genes)  HDA IDA  
Protein NP_001318784.1 [sequence] [blastp]
NP_200011.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 6,  nucl 2,  chlo 1  (predict for NP_001318784.1)
cyto 6,  nucl 2,  chlo 1  (predict for NP_200011.1)
Subcellular
localization
TargetP
other 8  (predict for NP_001318784.1)
other 8  (predict for NP_200011.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-m.9
for
AT5G51980
ath-u.5
for
AT5G51980
ath-r.7
for
AT5G51980
ath-e.2
for
AT5G51980
ath-m.4.bio
for
AT5G51980
ath-m.4.hor
for
AT5G51980
ath-m.4.lig
for
AT5G51980
ath-m.4.str
for
AT5G51980
ath-m.4.tis
for
AT5G51980
ath-u.5
for
ZFWD1
ath-u.5
for
AT5G40880
bra-r.6
for
103833487
bra-r.6
for
103863980
bra-r.6
for
103863258
bna-r.1
for
125607927
bna-r.1
for
106347093
ghi-r.1
for
107947281
ghi-r.1
for
107915377
ghi-r.1
for
121211219
cit-r.1
for
102613916
cit-r.1
for
102615090
cit-r.1
for
107175478
gma-u.5
for
100775542
ppo-u.5
for
7482113
ppo-u.5
for
7464908
ppo-u.5
for
7474016
mtr-u.5
for
25500966
mtr-u.5
for
25500839
mtr-u.5
for
25497231
sly-u.5
for
101261301
sot-r.1
for
102593039
nta-r.1
for
107791503
nta-r.1
for
107828246
osa-u.5
for
9271844
osa-u.5
for
4325667
zma-u.5
for
100502220
zma-u.5
for
100192554
tae-r.2
for
123077447
hvu-r.1
for
123408068
hvu-r.1
for
123442917
sbi-r.1
for
8073221
sbi-r.1
for
8078741
bdi-r.1
for
100845392
bdi-r.1
for
100833053
cre-r.1
for
CHLRE_12g510150v5


Ortholog ID: 1090
Species ath ath bra bra bra bna bna bna ghi ghi ghi cit cit cit gma vvi vvi ppo ppo ppo mtr mtr mtr sly sot nta nta osa osa zma zma tae tae hvu sbi sbi bdi bdi cre
Symbol AT5G51980 AT5G40880 LOC103833487 LOC103863980 LOC103857157 LOC106347093 LOC106446143 LOC111212086 LOC107947281 LOC121211219 LOC107892057 LOC102613916 LOC102615090 LOC107175478 LOC100802829 LOC100248072 LOC100252191 LOC7482113 LOC7464908 LOC7474016 LOC25500966 LOC25500839 LOC25497231 LOC101261301 LOC102593039 LOC107791503 LOC107828246 LOC9271844 LOC4325667 LOC100502220 LOC100192554 LOC123077447 LOC123137631 LOC123408068 LOC8073221 LOC8078741 LOC100845392 LOC100833053 CHLRE_12g510150v5
Function* Transducin/WD40 repeat-like superfamily protein WD-40 repeat family protein / zfwd3 protein (ZFWD3) zinc finger CCCH domain-containing protein 63 zinc finger CCCH domain-containing protein 59 zinc finger CCCH domain-containing protein 63 zinc finger CCCH domain-containing protein 48 zinc finger CCCH domain-containing protein 59 zinc finger CCCH domain-containing protein 63-like zinc finger CCCH domain-containing protein 63 zinc finger CCCH domain-containing protein 63 zinc finger CCCH domain-containing protein 48 zinc finger CCCH domain-containing protein 48-like zinc finger CCCH domain-containing protein 48 zinc finger CCCH domain-containing protein 17-like zinc finger CCCH domain-containing protein 48 zinc finger CCCH domain-containing protein 48 zinc finger CCCH domain-containing protein 48-like zinc finger CCCH domain-containing protein 48 zinc finger CCCH domain-containing protein 48 zinc finger CCCH domain-containing protein 48 uncharacterized LOC25500966 zinc finger CCCH domain-containing protein 48 zinc finger CCCH domain-containing protein 48 zinc finger CCCH domain-containing protein 48 zinc finger CCCH domain-containing protein 48 zinc finger CCCH domain-containing protein 48-like zinc finger CCCH domain-containing protein 48 zinc finger CCCH domain-containing protein 17-like zinc finger CCCH domain-containing protein 17-like Zinc finger CCCH domain-containing protein 59 nucleic acid binding protein zinc finger CCCH domain-containing protein 17 zinc finger CCCH domain-containing protein 17 zinc finger CCCH domain-containing protein 17-like zinc finger CCCH domain-containing protein 17 zinc finger CCCH domain-containing protein 17 zinc finger CCCH domain-containing protein 17 zinc finger CCCH domain-containing protein 17 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 5
ath04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03015 mRNA surveillance pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03015 mRNA surveillance pathway 4
bra03008 Ribosome biogenesis in eukaryotes 2
bra04144 Endocytosis 2
bra03013 Nucleocytoplasmic transport 2
bra03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00020 Citrate cycle (TCA cycle) 6
bna00630 Glyoxylate and dicarboxylate metabolism 6
bna01200 Carbon metabolism 6
bna01210 2-Oxocarboxylic acid metabolism 6
bna01230 Biosynthesis of amino acids 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04141 Protein processing in endoplasmic reticulum 6
bna03013 Nucleocytoplasmic transport 2
bna03015 mRNA surveillance pathway 2
bna03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03008 Ribosome biogenesis in eukaryotes 3
ghi00190 Oxidative phosphorylation 2
ghi04142 Lysosome 2
ghi04145 Phagosome 2
ghi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 2
ghi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03018 RNA degradation 3
cit03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00906 Carotenoid biosynthesis 2
cit03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04626 Plant-pathogen interaction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 2
vvi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03083 Polycomb repressive complex 3
ppo00514 Other types of O-glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03083 Polycomb repressive complex 3
ppo00514 Other types of O-glycan biosynthesis 2
ppo00020 Citrate cycle (TCA cycle) 2
ppo01200 Carbon metabolism 2
ppo01210 2-Oxocarboxylic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04120 Ubiquitin mediated proteolysis 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03013 Nucleocytoplasmic transport 3
mtr03018 RNA degradation 2
mtr03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03015 mRNA surveillance pathway 2
sot04382 Cornified envelope formation 2
sot04142 Lysosome 2
sot04144 Endocytosis 2
sot05100 Bacterial invasion of epithelial cells 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03018 RNA degradation 5
nta03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03018 RNA degradation 5
nta03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03015 mRNA surveillance pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03015 mRNA surveillance pathway 4
zma03013 Nucleocytoplasmic transport 2
zma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 7
tae03015 mRNA surveillance pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03013 Nucleocytoplasmic transport 4
tae03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04144 Endocytosis 3
sbi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04136 Autophagy - other 3
sbi04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03013 Nucleocytoplasmic transport 4
bdi03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03040 Spliceosome 7
cre03020 RNA polymerase 4
cre03420 Nucleotide excision repair 4
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 835273 834089 103833487 103863980 103857157 106347093 106446143 111212086 107947281 121211219 107892057 102613916 102615090 107175478 100802829 100248072 100252191 7482113 7464908 7474016 25500966 25500839 25497231 101261301 102593039 107791503 107828246 9271844 4325667 100502220 100192554 123077447 123137631 123408068 8073221 8078741 100845392 100833053 5716558
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