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Orthologous genes in OrthoFinder**

Species Gene Description
 gma-u.5   100775542   zinc finger CCCH domain-containing protein 48 
 gma-r.7   100775542   zinc finger CCCH domain-containing protein 48 
 gma-u.5   100799617   zinc finger CCCH domain-containing protein 48 
 mtr-u.5   25500966   uncharacterized LOC25500966 
 mtr-u.5   25500839   zinc finger CCCH domain-containing protein 48 
 mtr-u.5   25497231   zinc finger CCCH domain-containing protein 48 
 ppo-u.5   7482113   zinc finger CCCH domain-containing protein 48 
 ppo-u.5   7464908   zinc finger CCCH domain-containing protein 48 
 ppo-u.5   7474016   zinc finger CCCH domain-containing protein 48 
 ath-u.5   ZFWD1   zinc finger WD40 repeat protein 1 
 ath-u.5   AT5G40880   WD-40 repeat family protein / zfwd3 protein (ZFWD3) 
 vvi-u.5   100252191   zinc finger CCCH domain-containing protein 48-like 
 sly-u.5   101261301   zinc finger CCCH domain-containing protein 48 
 osa-u.5   9271844   zinc finger CCCH domain-containing protein 17-like 
 osa-u.5   4325667   zinc finger CCCH domain-containing protein 17-like 
 zma-u.5   100502220   Zinc finger CCCH domain-containing protein 59 
 zma-u.5   100192554   nucleic acid binding protein 

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Top 50 coexpressed genes to 100775542 (gma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100775542 (gma-u.5 coexpression data)

CoexMap"100775542"


gmaLOC100775542 | Entrez gene ID : 100775542      
Species gma mtr ppo ath vvi sly osa zma bdi hvu bra cit bna sbi ghi sot nta cre tae
Paralog 3 3 3 2 1 1 2 2 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0046872 [list] [network] metal ion binding  (3089 genes)  IEA  
GO:0005515 [list] [network] protein binding  (7243 genes)  IEA  
Protein XP_003548225.1 [sequence] [blastp]
XP_040866551.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 6,  nucl 1,  mito 1  (predict for XP_003548225.1)
chlo 8,  mito 1  (predict for XP_040866551.1)
Subcellular
localization
TargetP
other 8  (predict for XP_003548225.1)
other 8  (predict for XP_040866551.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

gma-u.5
for
100775542
gma-r.7
for
100775542
gma-u.5
for
100799617
mtr-u.5
for
25500966
mtr-u.5
for
25500839
mtr-u.5
for
25497231
ppo-u.5
for
7482113
ppo-u.5
for
7464908
ppo-u.5
for
7474016
ath-u.5
for
ZFWD1
ath-u.5
for
AT5G40880
vvi-u.5
for
100252191
sly-u.5
for
101261301
osa-u.5
for
9271844
osa-u.5
for
4325667
zma-u.5
for
100502220
zma-u.5
for
100192554


Ortholog ID: 1090
Species gma mtr mtr ppo ppo ath bra bra vvi vvi ghi ghi bna bna cit cit sly sot nta osa osa zma zma tae sbi sbi bdi bdi cre
Symbol LOC100802829 LOC25500966 LOC25497231 LOC7482113 LOC7474016 AT5G40880 LOC103857157 LOC103833487 LOC100248072 LOC100252191 LOC107947281 LOC121211219 LOC111212086 LOC106446143 LOC102615090 LOC107175478 LOC101261301 LOC102593039 LOC107828246 LOC4325667 LOC9271844 LOC100192554 LOC100502220 LOC123077447 LOC8073221 LOC8078741 LOC100833053 LOC100845392 CHLRE_12g510150v5
Function* zinc finger CCCH domain-containing protein 48 uncharacterized LOC25500966 zinc finger CCCH domain-containing protein 48 zinc finger CCCH domain-containing protein 48 zinc finger CCCH domain-containing protein 48 WD-40 repeat family protein / zfwd3 protein (ZFWD3) zinc finger CCCH domain-containing protein 63 zinc finger CCCH domain-containing protein 63 zinc finger CCCH domain-containing protein 48 zinc finger CCCH domain-containing protein 48-like zinc finger CCCH domain-containing protein 63 zinc finger CCCH domain-containing protein 63 zinc finger CCCH domain-containing protein 63-like zinc finger CCCH domain-containing protein 59 zinc finger CCCH domain-containing protein 48 zinc finger CCCH domain-containing protein 17-like zinc finger CCCH domain-containing protein 48 zinc finger CCCH domain-containing protein 48 zinc finger CCCH domain-containing protein 48 zinc finger CCCH domain-containing protein 17-like zinc finger CCCH domain-containing protein 17-like nucleic acid binding protein Zinc finger CCCH domain-containing protein 59 zinc finger CCCH domain-containing protein 17 zinc finger CCCH domain-containing protein 17 zinc finger CCCH domain-containing protein 17 zinc finger CCCH domain-containing protein 17 zinc finger CCCH domain-containing protein 17 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04626 Plant-pathogen interaction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04120 Ubiquitin mediated proteolysis 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03013 Nucleocytoplasmic transport 3
mtr03018 RNA degradation 2
mtr03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03083 Polycomb repressive complex 3
ppo00514 Other types of O-glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03083 Polycomb repressive complex 3
ppo00514 Other types of O-glycan biosynthesis 2
ppo00020 Citrate cycle (TCA cycle) 2
ppo01200 Carbon metabolism 2
ppo01210 2-Oxocarboxylic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03015 mRNA surveillance pathway 4
bra03008 Ribosome biogenesis in eukaryotes 2
bra04144 Endocytosis 2
bra03013 Nucleocytoplasmic transport 2
bra03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 2
vvi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03008 Ribosome biogenesis in eukaryotes 3
ghi00190 Oxidative phosphorylation 2
ghi04142 Lysosome 2
ghi04145 Phagosome 2
ghi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04141 Protein processing in endoplasmic reticulum 6
bna03013 Nucleocytoplasmic transport 2
bna03015 mRNA surveillance pathway 2
bna03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03018 RNA degradation 3
cit03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00906 Carotenoid biosynthesis 2
cit03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03015 mRNA surveillance pathway 2
sot04382 Cornified envelope formation 2
sot04142 Lysosome 2
sot04144 Endocytosis 2
sot05100 Bacterial invasion of epithelial cells 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03018 RNA degradation 5
nta03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03015 mRNA surveillance pathway 4
zma03013 Nucleocytoplasmic transport 2
zma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03015 mRNA surveillance pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 7
tae03015 mRNA surveillance pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04144 Endocytosis 3
sbi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04136 Autophagy - other 3
sbi04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03013 Nucleocytoplasmic transport 4
bdi03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03040 Spliceosome 7
cre03020 RNA polymerase 4
cre03420 Nucleotide excision repair 4
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100802829 25500966 25497231 7482113 7474016 834089 103857157 103833487 100248072 100252191 107947281 121211219 111212086 106446143 102615090 107175478 101261301 102593039 107828246 4325667 9271844 100192554 100502220 123077447 8073221 8078741 100833053 100845392 5716558
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