Select Species**


OK


Orthologous genes in OrthoFinder**

Species Gene Description
 hvu-r.1   123401165   zinc finger CCCH domain-containing protein 17 
 osa-u.5   4325667   zinc finger CCCH domain-containing protein 17-like 
 osa-u.5   9271844   zinc finger CCCH domain-containing protein 17-like 
 zma-u.5   100502220   Zinc finger CCCH domain-containing protein 59 
 zma-u.5   100192554   nucleic acid binding protein 
 ath-u.5   ZFWD1   zinc finger WD40 repeat protein 1 
 ath-u.5   AT5G40880   WD-40 repeat family protein / zfwd3 protein (ZFWD3) 
 gma-u.5   100775542   zinc finger CCCH domain-containing protein 48 
 gma-u.5   100799617   zinc finger CCCH domain-containing protein 48 
 sly-u.5   101261301   zinc finger CCCH domain-containing protein 48 
 vvi-u.5   100252191   zinc finger CCCH domain-containing protein 48-like 
 ppo-u.5   7482113   zinc finger CCCH domain-containing protein 48 
 ppo-u.5   7474016   zinc finger CCCH domain-containing protein 48 
 ppo-u.5   7464908   zinc finger CCCH domain-containing protein 48 
 mtr-u.5   25497231   zinc finger CCCH domain-containing protein 48 
 mtr-u.5   25500839   zinc finger CCCH domain-containing protein 48 
 mtr-u.5   25500966   uncharacterized LOC25500966 

close


Top 50 coexpressed genes to 123401165 (hvu-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

close

close

Top 50 enrichment test to 123401165 (hvu-r.1 coexpression data)

CoexMap"123401165"


hvuLOC123401165 | Entrez gene ID : 123401165    
Species hvu osa zma ath gma sly vvi ppo mtr bdi bra cit bna sbi ghi sot nta cre tae
Paralog 1 2 2 2 2 1 1 3 3 0 0 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0046872 [list] [network] metal ion binding  (2184 genes)  IEA  
GO:0005515 [list] [network] protein binding  (4692 genes)  IEA  
Protein XP_044950831.1 [sequence] [blastp]
XP_044950832.1 [sequence] [blastp]
XP_044950833.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 5,  cyto 3,  chlo_mito 3  (predict for XP_044950831.1)
chlo 5,  cyto 4,  nucl 1,  mito 1  (predict for XP_044950832.1)
chlo 7,  cyto 1,  nucl 1,  mito 1,  cyto_pero 1,  cyto_E.R. 1,  cyto_plas 1  (predict for XP_044950833.1)
Subcellular
localization
TargetP
chlo 4,  other 4  (predict for XP_044950831.1)
chlo 4,  other 4  (predict for XP_044950832.1)
chlo 4,  other 4  (predict for XP_044950833.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

hvu-r.1
for
123401165
osa-u.5
for
4325667
osa-u.5
for
9271844
zma-u.5
for
100502220
zma-u.5
for
100192554
ath-u.5
for
ZFWD1
ath-u.5
for
AT5G40880
gma-u.5
for
100775542
gma-u.5
for
100799617
sly-u.5
for
101261301
vvi-u.5
for
100252191
ppo-u.5
for
7482113
ppo-u.5
for
7474016
ppo-u.5
for
7464908
mtr-u.5
for
25497231
mtr-u.5
for
25500839
mtr-u.5
for
25500966


Ortholog ID: 1090
Species tae bdi bdi osa osa zma zma sbi sbi ath gma sly bra bra vvi vvi ppo ppo mtr mtr ghi ghi bna bna sot cit cit nta cre
Symbol LOC123077447 LOC100833053 LOC100845392 LOC4325667 LOC9271844 LOC100192554 LOC100502220 LOC8073221 LOC8078741 AT5G40880 LOC100802829 LOC101261301 LOC103857157 LOC103833487 LOC100248072 LOC100252191 LOC7482113 LOC7474016 LOC25500966 LOC25497231 LOC107947281 LOC121211219 LOC111212086 LOC106446143 LOC102593039 LOC102615090 LOC107175478 LOC107828246 CHLRE_12g510150v5
Function* zinc finger CCCH domain-containing protein 17 zinc finger CCCH domain-containing protein 17 zinc finger CCCH domain-containing protein 17 zinc finger CCCH domain-containing protein 17-like zinc finger CCCH domain-containing protein 17-like nucleic acid binding protein Zinc finger CCCH domain-containing protein 59 zinc finger CCCH domain-containing protein 17 zinc finger CCCH domain-containing protein 17 WD-40 repeat family protein / zfwd3 protein (ZFWD3) zinc finger CCCH domain-containing protein 48 zinc finger CCCH domain-containing protein 48 zinc finger CCCH domain-containing protein 63 zinc finger CCCH domain-containing protein 63 zinc finger CCCH domain-containing protein 48 zinc finger CCCH domain-containing protein 48-like zinc finger CCCH domain-containing protein 48 zinc finger CCCH domain-containing protein 48 uncharacterized LOC25500966 zinc finger CCCH domain-containing protein 48 zinc finger CCCH domain-containing protein 63 zinc finger CCCH domain-containing protein 63 zinc finger CCCH domain-containing protein 63-like zinc finger CCCH domain-containing protein 59 zinc finger CCCH domain-containing protein 48 zinc finger CCCH domain-containing protein 48 zinc finger CCCH domain-containing protein 17-like zinc finger CCCH domain-containing protein 48 uncharacterized protein
Coexmap

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
Coexpression

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 7
tae03015 mRNA surveillance pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03013 Nucleocytoplasmic transport 4
bdi03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03015 mRNA surveillance pathway 4
zma03013 Nucleocytoplasmic transport 2
zma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03015 mRNA surveillance pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04144 Endocytosis 3
sbi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04136 Autophagy - other 3
sbi04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04626 Plant-pathogen interaction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03015 mRNA surveillance pathway 4
bra03008 Ribosome biogenesis in eukaryotes 2
bra04144 Endocytosis 2
bra03013 Nucleocytoplasmic transport 2
bra03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 2
vvi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03083 Polycomb repressive complex 3
ppo00514 Other types of O-glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03083 Polycomb repressive complex 3
ppo00514 Other types of O-glycan biosynthesis 2
ppo00020 Citrate cycle (TCA cycle) 2
ppo01200 Carbon metabolism 2
ppo01210 2-Oxocarboxylic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04120 Ubiquitin mediated proteolysis 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03013 Nucleocytoplasmic transport 3
mtr03018 RNA degradation 2
mtr03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03008 Ribosome biogenesis in eukaryotes 3
ghi00190 Oxidative phosphorylation 2
ghi04142 Lysosome 2
ghi04145 Phagosome 2
ghi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04141 Protein processing in endoplasmic reticulum 6
bna03013 Nucleocytoplasmic transport 2
bna03015 mRNA surveillance pathway 2
bna03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03015 mRNA surveillance pathway 2
sot04382 Cornified envelope formation 2
sot04142 Lysosome 2
sot04144 Endocytosis 2
sot05100 Bacterial invasion of epithelial cells 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03018 RNA degradation 3
cit03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00906 Carotenoid biosynthesis 2
cit03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03018 RNA degradation 5
nta03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03040 Spliceosome 7
cre03020 RNA polymerase 4
cre03420 Nucleotide excision repair 4
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 123077447 100833053 100845392 4325667 9271844 100192554 100502220 8073221 8078741 834089 100802829 101261301 103857157 103833487 100248072 100252191 7482113 7474016 25500966 25497231 107947281 121211219 111212086 106446143 102593039 102615090 107175478 107828246 5716558
The preparation time of this page was 0.1 [sec].