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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-m.9   PTAC15   plastid transcriptionally active 15 
 ath-u.5   PTAC15   plastid transcriptionally active 15 
 ath-r.7   PTAC15   plastid transcriptionally active 15 
 ath-e.2   PTAC15   plastid transcriptionally active 15 
 ath-m.4.bio   PTAC15   plastid transcriptionally active 15 
 ath-m.4.hor   PTAC15   plastid transcriptionally active 15 
 ath-m.4.lig   PTAC15   plastid transcriptionally active 15 
 ath-m.4.str   PTAC15   plastid transcriptionally active 15 
 ath-m.4.tis   PTAC15   plastid transcriptionally active 15 
 bra-r.6   103844880   transcription termination factor MTERF8, chloroplastic 
 bna-r.1   106392956   transcription termination factor MTERF8, chloroplastic-like 
 bna-r.1   BNAC09G30580D   transcription termination factor MTERF8, chloroplastic 
 ghi-r.1   107938065   transcription termination factor MTERF8, chloroplastic 
 cit-r.1   102613723   transcription termination factor MTERF8, chloroplastic 
 gma-u.5   100799904   transcription termination factor MTERF8, chloroplastic 
 vvi-u.5   104877361   transcription termination factor MTERF8, chloroplastic 
 ppo-u.5   7475142   transcription termination factor MTERF8, chloroplastic 
 mtr-u.5   11421673   transcription termination factor MTERF8, chloroplastic 
 sly-u.5   101249713   transcription termination factor MTERF8, chloroplastic 
 sot-r.1   102588461   uncharacterized LOC102588461 
 nta-r.1   107780648   transcription termination factor MTERF8, chloroplastic 
 nta-r.1   107791341   transcription termination factor MTERF8, chloroplastic 

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Top 50 coexpressed genes to PTAC15 (ath-m.9 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to PTAC15 (ath-m.9 coexpression data)

CoexMap"835506"


athPTAC15 | Entrez gene ID : 835506      
Species ath bra bna ghi cit gma vvi ppo mtr sly sot nta sbi cre tae zma osa bdi hvu
Paralog 9 1 2 1 1 1 1 1 1 1 1 2 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006393 [list] [network] termination of mitochondrial transcription  (1 genes)  IDA  
GO:0015979 [list] [network] photosynthesis  (154 genes)  IDA  
GO CC
GO:0042644 [list] [network] chloroplast nucleoid  (48 genes)  HDA  
GO:0005739 [list] [network] mitochondrion  (4244 genes)  ISM  
GO:0009507 [list] [network] chloroplast  (5014 genes)  HDA IDA  
GO MF
GO:0003690 [list] [network] double-stranded DNA binding  (800 genes)  IEA  
GO:0003729 [list] [network] mRNA binding  (1514 genes)  IDA  
Protein NP_200229.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 9,  chlo_mito 5  (predict for NP_200229.1)
Subcellular
localization
TargetP
chlo 8  (predict for NP_200229.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-m.9
for
PTAC15
ath-u.5
for
PTAC15
ath-r.7
for
PTAC15
ath-e.2
for
PTAC15
ath-m.4.bio
for
PTAC15
ath-m.4.hor
for
PTAC15
ath-m.4.lig
for
PTAC15
ath-m.4.str
for
PTAC15
ath-m.4.tis
for
PTAC15
bra-r.6
for
103844880
bna-r.1
for
106392956
bna-r.1
for
BNAC09G30580D
ghi-r.1
for
107938065
cit-r.1
for
102613723
gma-u.5
for
100799904
vvi-u.5
for
104877361
ppo-u.5
for
7475142
mtr-u.5
for
11421673
sly-u.5
for
101249713
sot-r.1
for
102588461
nta-r.1
for
107780648
nta-r.1
for
107791341


Ortholog ID: 13749
Species ath bra bna bna ghi cit gma vvi ppo mtr sly sot nta nta
Symbol PTAC15 LOC103844880 LOC106392956 BNAC09G30580D LOC107938065 LOC102613723 LOC100799904 LOC104877361 LOC7475142 LOC11421673 LOC101249713 LOC102588461 LOC107780648 LOC107791341
Function* plastid transcriptionally active 15 transcription termination factor MTERF8, chloroplastic transcription termination factor MTERF8, chloroplastic-like transcription termination factor MTERF8, chloroplastic transcription termination factor MTERF8, chloroplastic transcription termination factor MTERF8, chloroplastic transcription termination factor MTERF8, chloroplastic transcription termination factor MTERF8, chloroplastic transcription termination factor MTERF8, chloroplastic transcription termination factor MTERF8, chloroplastic transcription termination factor MTERF8, chloroplastic uncharacterized LOC102588461 transcription termination factor MTERF8, chloroplastic transcription termination factor MTERF8, chloroplastic
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 3
bra04141 Protein processing in endoplasmic reticulum 3
bra04144 Endocytosis 3
bra03018 RNA degradation 3
bra00561 Glycerolipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03018 RNA degradation 6
bna00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03018 RNA degradation 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04626 Plant-pathogen interaction 3
gma00230 Purine metabolism 2
gma00220 Arginine biosynthesis 2
gma00330 Arginine and proline metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04626 Plant-pathogen interaction 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 835506 103844880 106392956 106392963 107938065 102613723 100799904 104877361 7475142 11421673 101249713 102588461 107780648 107791341
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