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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5   PTAC15   plastid transcriptionally active 15 
 ath-r.7   PTAC15   plastid transcriptionally active 15 
 ath-m.9   PTAC15   plastid transcriptionally active 15 
 ath-e.2   PTAC15   plastid transcriptionally active 15 
 ath-m.4.bio   PTAC15   plastid transcriptionally active 15 
 ath-m.4.hor   PTAC15   plastid transcriptionally active 15 
 ath-m.4.lig   PTAC15   plastid transcriptionally active 15 
 ath-m.4.str   PTAC15   plastid transcriptionally active 15 
 ath-m.4.tis   PTAC15   plastid transcriptionally active 15 
 gma-u.5   100799904   transcription termination factor MTERF8, chloroplastic 
 vvi-u.5   104877361   transcription termination factor MTERF8, chloroplastic 
 ppo-u.5   7475142   transcription termination factor MTERF8, chloroplastic 
 mtr-u.5   11421673   transcription termination factor MTERF8, chloroplastic 
 sly-u.5   101249713   transcription termination factor MTERF8, chloroplastic 

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Top 50 coexpressed genes to PTAC15 (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to PTAC15 (ath-u.5 coexpression data)

CoexMap"835506"


athPTAC15 | Entrez gene ID : 835506      
Species ath gma vvi ppo mtr sly tae osa hvu zma ghi bdi cit bra cre sbi bna nta sot
Paralog 9 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006393 [list] [network] termination of mitochondrial transcription  (1 genes)  IDA  
GO:0015979 [list] [network] photosynthesis  (154 genes)  IDA  
GO CC
GO:0042644 [list] [network] chloroplast nucleoid  (48 genes)  HDA  
GO:0005739 [list] [network] mitochondrion  (4244 genes)  ISM  
GO:0009507 [list] [network] chloroplast  (5014 genes)  HDA IDA  
GO MF
GO:0003690 [list] [network] double-stranded DNA binding  (800 genes)  IEA  
GO:0003729 [list] [network] mRNA binding  (1514 genes)  IDA  
Protein NP_200229.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 9,  chlo_mito 5  (predict for NP_200229.1)
Subcellular
localization
TargetP
chlo 8  (predict for NP_200229.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-u.5
for
PTAC15

.
ath-r.7
for
PTAC15

.
ath-m.9
for
PTAC15

.
ath-e.2
for
PTAC15

.
ath-m.4.bio
for
PTAC15

.
ath-m.4.hor
for
PTAC15

.
ath-m.4.lig
for
PTAC15

.
ath-m.4.str
for
PTAC15

.
ath-m.4.tis
for
PTAC15

.
gma-u.5
for
100799904

.
vvi-u.5
for
104877361

.
ppo-u.5
for
7475142

.
mtr-u.5
for
11421673

.
sly-u.5
for
101249713

.


Ortholog ID: 13749
Species ath gma sly bra vvi ppo mtr ghi bna bna sot cit nta nta
Symbol PTAC15 LOC100799904 LOC101249713 LOC103844880 LOC104877361 LOC7475142 LOC11421673 LOC107938065 LOC106392956 BNAC09G30580D LOC102588461 LOC102613723 LOC107780648 LOC107791341
Function* plastid transcriptionally active 15 transcription termination factor MTERF8, chloroplastic transcription termination factor MTERF8, chloroplastic transcription termination factor MTERF8, chloroplastic transcription termination factor MTERF8, chloroplastic transcription termination factor MTERF8, chloroplastic transcription termination factor MTERF8, chloroplastic transcription termination factor MTERF8, chloroplastic transcription termination factor MTERF8, chloroplastic-like transcription termination factor MTERF8, chloroplastic uncharacterized LOC102588461 transcription termination factor MTERF8, chloroplastic transcription termination factor MTERF8, chloroplastic transcription termination factor MTERF8, chloroplastic
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04626 Plant-pathogen interaction 3
gma00230 Purine metabolism 2
gma00220 Arginine biosynthesis 2
gma00330 Arginine and proline metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 3
bra04141 Protein processing in endoplasmic reticulum 3
bra04144 Endocytosis 3
bra03018 RNA degradation 3
bra00561 Glycerolipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03018 RNA degradation 6
bna00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03018 RNA degradation 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04626 Plant-pathogen interaction 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 835506 100799904 101249713 103844880 104877361 7475142 11421673 107938065 106392956 106392963 102588461 102613723 107780648 107791341
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