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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-m.9   APO2   APO RNA-binding protein (DUF794) 
 ath-u.5   APO2   APO RNA-binding protein (DUF794) 
 ath-r.7   APO2   APO RNA-binding protein (DUF794) 
 ath-e.2   APO2   APO RNA-binding protein (DUF794) 
 ath-m.4.bio   APO2   APO RNA-binding protein (DUF794) 
 ath-m.4.hor   APO2   APO RNA-binding protein (DUF794) 
 ath-m.4.lig   APO2   APO RNA-binding protein (DUF794) 
 ath-m.4.str   APO2   APO RNA-binding protein (DUF794) 
 ath-m.4.tis   APO2   APO RNA-binding protein (DUF794) 
 bra-r.6   103851675   APO protein 2, chloroplastic 
 bna-r.1   106388528   APO protein 2, chloroplastic 
 bna-r.1   106387786   APO protein 2, chloroplastic 
 ghi-r.1   107948703   APO protein 2, chloroplastic 
 ghi-r.1   107940064   APO protein 2, chloroplastic 
 cit-r.1   102610466   APO protein 2, chloroplastic 
 gma-u.5   100792452   APO protein 2, chloroplastic 
 vvi-u.5   100244952   APO protein 2, chloroplastic 
 ppo-u.5   7493392   APO protein 2, chloroplastic 
 ppo-u.5   7485247   APO protein 2, chloroplastic 
 mtr-u.5   11408865   APO protein 2, chloroplastic 
 mtr-u.5   25486983   APO protein 2, chloroplastic 
 sly-u.5   101267130   APO protein 2, chloroplastic 
 sot-r.1   102588430   APO protein 2, chloroplastic 
 nta-r.1   107780535   APO protein 2, chloroplastic 
 nta-r.1   107788394   APO protein 2, chloroplastic-like 
 osa-u.5   4330635   APO protein 2, chloroplastic 
 zma-u.5   100194271   APO2 
 tae-r.2   123145411   APO protein 2, chloroplastic 
 tae-r.2   123138154   APO protein 2, chloroplastic 
 tae-r.2   123128302   APO protein 2, chloroplastic 
 hvu-r.1   123402055   APO protein 2, chloroplastic-like 
 sbi-r.1   8077682   APO protein 2, chloroplastic 
 bdi-r.1   100841740   APO protein 2, chloroplastic 

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Top 50 coexpressed genes to APO2 (ath-m.9 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to APO2 (ath-m.9 coexpression data)

CoexMap"835904"


athAPO2 | Entrez gene ID : 835904      
Species ath bra bna ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 9 1 2 2 1 1 1 2 2 1 1 2 1 1 3 1 1 1 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009615 [list] [network] response to virus  (102 genes)  IEP  
GO:0009793 [list] [network] embryo development ending in seed dormancy  (569 genes)  NAS  
GO CC
GO:0009507 [list] [network] chloroplast  (5014 genes)  ISM  
GO MF
Protein NP_200601.3 [sequence] [blastp]
NP_851208.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 9  (predict for NP_200601.3)
chlo 9  (predict for NP_851208.1)
Subcellular
localization
TargetP
chlo 9  (predict for NP_200601.3)
chlo 8  (predict for NP_851208.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-m.9
for
APO2
ath-u.5
for
APO2
ath-r.7
for
APO2
ath-e.2
for
APO2
ath-m.4.bio
for
APO2
ath-m.4.hor
for
APO2
ath-m.4.lig
for
APO2
ath-m.4.str
for
APO2
ath-m.4.tis
for
APO2
bra-r.6
for
103851675
bna-r.1
for
106388528
bna-r.1
for
106387786
ghi-r.1
for
107948703
ghi-r.1
for
107940064
cit-r.1
for
102610466
gma-u.5
for
100792452
vvi-u.5
for
100244952
ppo-u.5
for
7493392
ppo-u.5
for
7485247
mtr-u.5
for
11408865
mtr-u.5
for
25486983
sly-u.5
for
101267130
sot-r.1
for
102588430
nta-r.1
for
107780535
nta-r.1
for
107788394
osa-u.5
for
4330635
zma-u.5
for
100194271
tae-r.2
for
123145411
tae-r.2
for
123138154
tae-r.2
for
123128302
hvu-r.1
for
123402055
sbi-r.1
for
8077682
bdi-r.1
for
100841740


Ortholog ID: 10404
Species ath bra bna bna ghi ghi cit gma vvi ppo ppo mtr mtr sly sot nta nta osa zma tae tae tae hvu sbi bdi
Symbol APO2 LOC103851675 LOC106388528 LOC106387786 LOC107948703 LOC107940064 LOC102610466 LOC100792452 LOC100244952 LOC7493392 LOC7485247 LOC11408865 LOC25486983 LOC101267130 LOC102588430 LOC107780535 LOC107788394 LOC4330635 LOC100194271 LOC123145411 LOC123138154 LOC123128302 LOC123402055 LOC8077682 LOC100841740
Function* APO RNA-binding protein (DUF794) APO protein 2, chloroplastic APO protein 2, chloroplastic APO protein 2, chloroplastic APO protein 2, chloroplastic APO protein 2, chloroplastic APO protein 2, chloroplastic APO protein 2, chloroplastic APO protein 2, chloroplastic APO protein 2, chloroplastic APO protein 2, chloroplastic APO protein 2, chloroplastic APO protein 2, chloroplastic APO protein 2, chloroplastic APO protein 2, chloroplastic APO protein 2, chloroplastic APO protein 2, chloroplastic-like APO protein 2, chloroplastic APO2 APO protein 2, chloroplastic APO protein 2, chloroplastic APO protein 2, chloroplastic APO protein 2, chloroplastic-like APO protein 2, chloroplastic APO protein 2, chloroplastic
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00740 Riboflavin metabolism 2
bna01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00740 Riboflavin metabolism 2
bna01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 3
gma00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 4
ppo01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 2
ppo00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04626 Plant-pathogen interaction 3
tae03010 Ribosome 2
tae00860 Porphyrin metabolism 2
tae03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00230 Purine metabolism 2
bdi00564 Glycerophospholipid metabolism 2
bdi03018 RNA degradation 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 835904 103851675 106388528 106387786 107948703 107940064 102610466 100792452 100244952 7493392 7485247 11408865 25486983 101267130 102588430 107780535 107788394 4330635 100194271 123145411 123138154 123128302 123402055 8077682 100841740
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