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Orthologous genes in OrthoFinder**

Species Gene Description
 mtr-u.5   11408865   APO protein 2, chloroplastic 
 mtr-r.5   11408865   APO protein 2, chloroplastic 
 mtr-m.5   11408865   APO protein 2, chloroplastic 
 mtr-u.5   25486983   APO protein 2, chloroplastic 
 gma-u.5   100792452   APO protein 2, chloroplastic 
 ppo-u.5   7493392   APO protein 2, chloroplastic 
 ppo-u.5   7485247   APO protein 2, chloroplastic 
 ath-u.5   APO2   APO RNA-binding protein (DUF794) 
 vvi-u.5   100244952   APO protein 2, chloroplastic 
 sly-u.5   101267130   APO protein 2, chloroplastic 
 osa-u.5   4330635   APO protein 2, chloroplastic 
 zma-u.5   100194271   APO2 

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Top 50 coexpressed genes to 11408865 (mtr-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 11408865 (mtr-u.5 coexpression data)

CoexMap"11408865"


mtrLOC11408865 | Entrez gene ID : 11408865      
Species mtr gma ppo ath vvi sly osa zma nta bna tae bdi sot bra sbi hvu cit cre ghi
Paralog 4 1 2 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0003723 [list] [network] RNA binding  (1400 genes)  IEA  
Protein XP_003596991.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 6,  cyto 2,  mito 1  (predict for XP_003596991.1)
Subcellular
localization
TargetP
other 6  (predict for XP_003596991.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

mtr-u.5
for
11408865

.
mtr-r.5
for
11408865

.
mtr-m.5
for
11408865

.
mtr-u.5
for
25486983

.
gma-u.5
for
100792452

.
ppo-u.5
for
7493392

.
ppo-u.5
for
7485247

.
ath-u.5
for
APO2

.
vvi-u.5
for
100244952

.
sly-u.5
for
101267130

.
osa-u.5
for
4330635

.
zma-u.5
for
100194271

.


Ortholog ID: 10404
Species ath gma sly osa zma bra vvi ppo ppo mtr mtr tae tae hvu ghi ghi bna bna sbi sot cit bdi nta nta
Symbol APO2 LOC100792452 LOC101267130 LOC4330635 LOC100194271 LOC103851675 LOC100244952 LOC7493392 LOC7485247 LOC25486983 LOC11408865 LOC123138154 LOC123145411 LOC123402055 LOC107948703 LOC107940064 LOC106388528 LOC106387786 LOC8077682 LOC102588430 LOC102610466 LOC100841740 LOC107788394 LOC107780535
Function* APO RNA-binding protein (DUF794) APO protein 2, chloroplastic APO protein 2, chloroplastic APO protein 2, chloroplastic APO2 APO protein 2, chloroplastic APO protein 2, chloroplastic APO protein 2, chloroplastic APO protein 2, chloroplastic APO protein 2, chloroplastic APO protein 2, chloroplastic APO protein 2, chloroplastic APO protein 2, chloroplastic APO protein 2, chloroplastic-like APO protein 2, chloroplastic APO protein 2, chloroplastic APO protein 2, chloroplastic APO protein 2, chloroplastic APO protein 2, chloroplastic APO protein 2, chloroplastic APO protein 2, chloroplastic APO protein 2, chloroplastic APO protein 2, chloroplastic-like APO protein 2, chloroplastic
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 3
gma00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 4
ppo01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 2
ppo00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00740 Riboflavin metabolism 2
bna01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00740 Riboflavin metabolism 2
bna01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00230 Purine metabolism 2
bdi00564 Glycerophospholipid metabolism 2
bdi03018 RNA degradation 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 835904 100792452 101267130 4330635 100194271 103851675 100244952 7493392 7485247 25486983 11408865 123138154 123145411 123402055 107948703 107940064 106388528 106387786 8077682 102588430 102610466 100841740 107788394 107780535
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