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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-m.9   AT5G61670   orange protein 
 ath-u.5   AT5G61670   orange protein 
 ath-r.7   AT5G61670   orange protein 
 ath-e.2   AT5G61670   orange protein 
 ath-m.4.bio   AT5G61670   orange protein 
 ath-m.4.hor   AT5G61670   orange protein 
 ath-m.4.lig   AT5G61670   orange protein 
 ath-m.4.str   AT5G61670   orange protein 
 ath-m.4.tis   AT5G61670   orange protein 
 bra-r.6   103837392   protein ORANGE, chloroplastic 
 bna-r.1   BNAA09G05780D   protein ORANGE, chloroplastic 
 bna-r.1   BNAC09G05380D   protein ORANGE, chloroplastic 
 ghi-r.1   107949685   protein ORANGE-GREEN, chloroplastic 
 ghi-r.1   107953613   protein ORANGE, chloroplastic 
 ghi-r.1   107952334   protein ORANGE, chloroplastic 
 cit-r.1   102629028   hypothetical protein 
 gma-u.5   100780118   protein ORANGE, chloroplastic 
 gma-u.5   100780032   OR-like zinc finger domain-containing protein 
 vvi-u.5   100266582   protein ORANGE, chloroplastic 
 ppo-u.5   18103854   protein ORANGE, chloroplastic 
 mtr-u.5   11435230   protein ORANGE, chloroplastic 
 sly-u.5   101244466   ORANGE protein-like 
 sot-r.1   102601642   uncharacterized LOC102601642 
 nta-r.1   107819685   protein ORANGE, chloroplastic 
 nta-r.1   107776698   uncharacterized LOC107776698 
 osa-u.5   4330168   protein ORANGE, chloroplastic 
 zma-u.5   100275801   uncharacterized LOC100275801 
 tae-r.2   123144969   protein ORANGE, chloroplastic 
 tae-r.2   123137764   protein ORANGE, chloroplastic 
 tae-r.2   123127877   protein ORANGE, chloroplastic 
 hvu-r.1   123402904   protein ORANGE, chloroplastic-like 
 sbi-r.1   8077677   protein ORANGE, chloroplastic 
 bdi-r.1   100839704   protein ORANGE, chloroplastic 
 cre-r.1   CHLRE_06g279500v5   uncharacterized protein 

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Top 50 coexpressed genes to AT5G61670 (ath-m.9 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to AT5G61670 (ath-m.9 coexpression data)

CoexMap"836289"


athAT5G61670 | Entrez gene ID : 836289      
Species ath bra bna ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 9 1 2 3 1 2 1 1 1 1 1 2 1 1 3 1 1 1 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009661 [list] [network] chromoplast organization  (1 genes)  ISS  
GO:1904143 [list] [network] positive regulation of carotenoid biosynthetic process  (4 genes)  IMP  
GO:0016120 [list] [network] carotene biosynthetic process  (7 genes)  ISS  
GO:0050821 [list] [network] protein stabilization  (15 genes)  IGI IMP  
GO:0009704 [list] [network] de-etiolation  (18 genes)  IMP  
GO:0009658 [list] [network] chloroplast organization  (197 genes)  IGI IMP  
GO:0009416 [list] [network] response to light stimulus  (776 genes)  IEP  
GO CC
GO:0009507 [list] [network] chloroplast  (5014 genes)  IDA  
GO:0009536 [list] [network] plastid  (5443 genes)  ISS  
GO:0005634 [list] [network] nucleus  (10367 genes)  IDA IPI  
GO:0005737 [list] [network] cytoplasm  (14000 genes)  IDA  
GO MF
GO:0005515 [list] [network] protein binding  (5363 genes)  IPI  
Protein NP_200975.1 [sequence] [blastp]
NP_974975.1 [sequence] [blastp]
Subcellular
localization
wolf
plas 5,  chlo 2,  mito 1,  E.R. 1,  pero 1,  cyto_mito 1  (predict for NP_200975.1)
plas 5,  chlo 2,  mito 1,  E.R. 1,  pero 1,  cyto_mito 1  (predict for NP_974975.1)
Subcellular
localization
TargetP
chlo 5,  mito 5  (predict for NP_200975.1)
chlo 5,  mito 5  (predict for NP_974975.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-m.9
for
AT5G61670
ath-u.5
for
AT5G61670
ath-r.7
for
AT5G61670
ath-e.2
for
AT5G61670
ath-m.4.bio
for
AT5G61670
ath-m.4.hor
for
AT5G61670
ath-m.4.lig
for
AT5G61670
ath-m.4.str
for
AT5G61670
ath-m.4.tis
for
AT5G61670
bra-r.6
for
103837392
bna-r.1
for
BNAA09G05780D
bna-r.1
for
BNAC09G05380D
ghi-r.1
for
107949685
ghi-r.1
for
107953613
ghi-r.1
for
107952334
cit-r.1
for
102629028
gma-u.5
for
100780118
gma-u.5
for
100780032
vvi-u.5
for
100266582
ppo-u.5
for
18103854
mtr-u.5
for
11435230
sly-u.5
for
101244466
sot-r.1
for
102601642
nta-r.1
for
107819685
nta-r.1
for
107776698
osa-u.5
for
4330168
zma-u.5
for
100275801
tae-r.2
for
123144969
tae-r.2
for
123137764
tae-r.2
for
123127877
hvu-r.1
for
123402904
sbi-r.1
for
8077677
bdi-r.1
for
100839704
cre-r.1
for
CHLRE_06g279500v5


Ortholog ID: 9186
Species ath bra bna bna ghi ghi ghi cit gma gma vvi ppo mtr sly sot nta nta osa zma tae tae tae hvu sbi bdi cre
Symbol AT5G61670 LOC103837392 BNAA09G05780D BNAC09G05380D LOC107949685 LOC107953613 LOC107952334 LOC102629028 LOC100780118 LOC100780032 LOC100266582 LOC18103854 LOC11435230 LOC101244466 LOC102601642 LOC107819685 LOC107776698 LOC4330168 LOC100275801 LOC123144969 LOC123137764 LOC123127877 LOC123402904 LOC8077677 LOC100839704 CHLRE_06g279500v5
Function* orange protein protein ORANGE, chloroplastic protein ORANGE, chloroplastic protein ORANGE, chloroplastic protein ORANGE-GREEN, chloroplastic protein ORANGE, chloroplastic protein ORANGE, chloroplastic hypothetical protein protein ORANGE, chloroplastic OR-like zinc finger domain-containing protein protein ORANGE, chloroplastic protein ORANGE, chloroplastic protein ORANGE, chloroplastic ORANGE protein-like uncharacterized LOC102601642 protein ORANGE, chloroplastic uncharacterized LOC107776698 protein ORANGE, chloroplastic uncharacterized LOC100275801 protein ORANGE, chloroplastic protein ORANGE, chloroplastic protein ORANGE, chloroplastic protein ORANGE, chloroplastic-like protein ORANGE, chloroplastic protein ORANGE, chloroplastic uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra01230 Biosynthesis of amino acids 2
bra00906 Carotenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna01230 Biosynthesis of amino acids 3
bna00260 Glycine, serine and threonine metabolism 2
bna00261 Monobactam biosynthesis 2
bna00270 Cysteine and methionine metabolism 2
bna00300 Lysine biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna01230 Biosynthesis of amino acids 4
bna00260 Glycine, serine and threonine metabolism 2
bna00261 Monobactam biosynthesis 2
bna00270 Cysteine and methionine metabolism 2
bna00300 Lysine biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04120 Ubiquitin mediated proteolysis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04120 Ubiquitin mediated proteolysis 3
gma03083 Polycomb repressive complex 2
gma04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo01200 Carbon metabolism 3
ppo04142 Lysosome 2
ppo00592 alpha-Linolenic acid metabolism 2
ppo00053 Ascorbate and aldarate metabolism 2
ppo00480 Glutathione metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00906 Carotenoid biosynthesis 5
mtr00900 Terpenoid backbone biosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00900 Terpenoid backbone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00480 Glutathione metabolism 2
nta00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00480 Glutathione metabolism 2
nta00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00053 Ascorbate and aldarate metabolism 3
tae00900 Terpenoid backbone biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00053 Ascorbate and aldarate metabolism 3
tae00480 Glutathione metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00053 Ascorbate and aldarate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00900 Terpenoid backbone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00900 Terpenoid backbone biosynthesis 3
bdi00906 Carotenoid biosynthesis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 836289 103837392 106366082 106451893 107949685 107953613 107952334 102629028 100780118 100780032 100266582 18103854 11435230 101244466 102601642 107819685 107776698 4330168 100275801 123144969 123137764 123127877 123402904 8077677 100839704 5720891
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