ATTED-II : GeneCoexpression result

Orthologous genes in OrthoFinder^**

Species	Gene	Description
ath-m.9	RTM1	Mannose-binding lectin superfamily protein
ath-m.4.bio	RTM1	Mannose-binding lectin superfamily protein
ath-m.4.hor	RTM1	Mannose-binding lectin superfamily protein
ath-m.4.lig	RTM1	Mannose-binding lectin superfamily protein
ath-m.4.str	RTM1	Mannose-binding lectin superfamily protein
ath-m.4.tis	RTM1	Mannose-binding lectin superfamily protein
ath-u.5	AT2G43745	jacalin lectin-like protein
bra-r.6	103844097	protein RESTRICTED TEV MOVEMENT 1
ppo-u.5	7485821	inactive protein RESTRICTED TEV MOVEMENT 1
sly-u.5	101262560	inactive protein RESTRICTED TEV MOVEMENT 1

Annotation

functional annotation

KEGG

GO BP

GO:0046741 [list] [network] transport of virus in host, tissue to tissue	(3 genes)	IDA IMP
GO:0051607 [list] [network] defense response to virus	(55 genes)	IMP
GO:0009615 [list] [network] response to virus	(102 genes)	IMP

GO CC

GO:0005737 [list] [network] cytoplasm

(14000 genes)

IDA

GO MF

GO:0030246 [list] [network] carbohydrate binding	(164 genes)	ISS
GO:0005515 [list] [network] protein binding	(5363 genes)	IPI

Protein

NP_001320978.1 [sequence] [blastp]
NP_172067.1 [sequence] [blastp]

Subcellular
localization
wolf

nucl 6, cyto_nucl 4, cyto 1, chlo 1, mito 1, extr 1, chlo_mito 1	(predict for NP_001320978.1)
nucl 4, cyto 2, cysk_nucl 2, pero 1, cyto_E.R. 1, cyto_plas 1	(predict for NP_172067.1)

Subcellular
localization
TargetP

other 5, mito 3	(predict for NP_001320978.1)
other 9	(predict for NP_172067.1)

Gene expression

All samples

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Condition-specific^*					Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	ath-m.9 for RTM1	ath-m.4.bio for RTM1	ath-m.4.hor for RTM1	ath-m.4.lig for RTM1	ath-m.4.str for RTM1	ath-m.4.tis for RTM1	ath-u.5 for AT2G43745	bra-r.6 for 103844097	ppo-u.5 for 7485821	sly-u.5 for 101262560