Select Species**


OK


Orthologous genes in OrthoFinder**

Species Gene Description
 ath-m.9   SR45a   RNA-binding (RRM/RBD/RNP motifs) family protein 
 ath-u.5   SR45a   RNA-binding (RRM/RBD/RNP motifs) family protein 
 ath-r.7   SR45a   RNA-binding (RRM/RBD/RNP motifs) family protein 
 ath-e.2   SR45a   RNA-binding (RRM/RBD/RNP motifs) family protein 
 ath-m.4.bio   SR45a   RNA-binding (RRM/RBD/RNP motifs) family protein 
 ath-m.4.hor   SR45a   RNA-binding (RRM/RBD/RNP motifs) family protein 
 ath-m.4.lig   SR45a   RNA-binding (RRM/RBD/RNP motifs) family protein 
 ath-m.4.str   SR45a   RNA-binding (RRM/RBD/RNP motifs) family protein 
 ath-m.4.tis   SR45a   RNA-binding (RRM/RBD/RNP motifs) family protein 
 ath-u.5   AT4G35785   RNA-binding (RRM/RBD/RNP motifs) family protein 
 bra-r.6   103843952   serine/arginine-rich splicing factor SR45a 
 bra-r.6   103873570   serine/arginine-rich splicing factor SR45a 
 bra-r.6   103834931   serine/arginine-rich splicing factor SR45a 
 bna-r.1   106351347   serine/arginine-rich splicing factor SR45a-like 
 bna-r.1   106361290   serine/arginine-rich splicing factor SR45a 
 bna-r.1   106391120   serine/arginine-rich splicing factor SR45a-like 
 ghi-r.1   107949952   serine/arginine-rich splicing factor SR45a 
 ghi-r.1   121215523   serine/arginine-rich splicing factor SR45a 
 ghi-r.1   107947042   serine/arginine-rich splicing factor SR45a 
 cit-r.1   102631198   serine/arginine-rich splicing factor SR45a 
 cit-r.1   102622263   serine/arginine-rich splicing factor SR45a-like 
 cit-r.1   102618370   serine/arginine-rich splicing factor SR45a 
 gma-u.5   100499944   RNA-binding (RRM/RBD/RNP motifs) family protein 
 gma-u.5   100805126   serine/arginine-rich splicing factor SR45a 
 gma-u.5   100527350   RNA recognition motif-containing protein 
 vvi-u.5   100263989   serine/arginine-rich splicing factor SR45a 
 vvi-u.5   109122082   serine/arginine-rich splicing factor SR45a 
 vvi-u.5   100246735   serine/arginine-rich splicing factor SR45a 
 ppo-u.5   7458189   serine/arginine-rich splicing factor SR45a 
 ppo-u.5   7468012   serine/arginine-rich splicing factor SR45a 
 ppo-u.5   7481499   serine/arginine-rich splicing factor SR45a 
 mtr-u.5   11430997   serine/arginine-rich splicing factor SR45a 
 mtr-u.5   25490768   serine/arginine-rich splicing factor SR45a 
 mtr-u.5   11440544   serine/arginine-rich splicing factor SR45a 
 sly-u.5   101246587   serine/arginine-rich splicing factor SR45a 
 sly-u.5   101255764   serine/arginine-rich splicing factor SR45a 
 sly-u.5   101261529   serine/arginine-rich splicing factor SR45a 
 sot-r.1   102582203   serine/arginine-rich splicing factor SR45a-like 
 sot-r.1   102579598   serine/arginine-rich splicing factor SR45a-like 
 sot-r.1   102579367   serine/arginine-rich splicing factor SR45a 
 nta-r.1   107780634   serine/arginine-rich splicing factor SR45a-like 
 nta-r.1   107779600   uncharacterized LOC107779600 
 nta-r.1   107783926   uncharacterized LOC107783926 
 osa-u.5   4332350   serine/arginine-rich splicing factor SR45a 
 osa-u.5   4342102   serine/arginine-rich splicing factor SR45a 
 osa-u.5   4345455   serine/arginine-rich splicing factor SR45a 
 zma-u.5   100282309   uncharacterized LOC100282309 
 zma-u.5   100283023   transformer-2 protein 
 tae-r.2   123149730   serine/arginine-rich splicing factor SR45a 
 tae-r.2   123085382   serine/arginine-rich splicing factor SR45a 
 tae-r.2   123090159   serine/arginine-rich splicing factor SR45a 
 hvu-r.1   123450642   serine/arginine-rich splicing factor SR45a-like 
 hvu-r.1   123413361   serine/arginine-rich splicing factor SR45a-like 
 hvu-r.1   123407403   serine/arginine-rich splicing factor SR45a-like 
 sbi-r.1   110431601   serine/arginine-rich splicing factor SR45a 
 sbi-r.1   8073514   serine/arginine-rich splicing factor SR45a 
 sbi-r.1   8069209   serine/arginine-rich splicing factor SR45a 
 bdi-r.1   100833800   serine/arginine-rich splicing factor SR45a 
 bdi-r.1   100845877   serine/arginine-rich splicing factor SR45a 

close


Top 50 coexpressed genes to SR45a (ath-m.9 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

close

close

Top 50 enrichment test to SR45a (ath-m.9 coexpression data)

CoexMap"837246"


athSR45a | Entrez gene ID : 837246      
Species ath bra bna ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 10 3 3 3 3 3 3 3 3 3 3 3 3 2 3 3 3 2 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0043484 [list] [network] regulation of RNA splicing  (22 genes)  IMP  
GO:0009644 [list] [network] response to high light intensity  (71 genes)  IMP  
GO:0008380 [list] [network] RNA splicing  (195 genes)  NAS  
GO CC
GO:0009507 [list] [network] chloroplast  (5014 genes)  ISM  
GO:0005634 [list] [network] nucleus  (10367 genes)  ISM  
GO MF
GO:0005515 [list] [network] protein binding  (5363 genes)  IPI  
Protein NP_001323001.1 [sequence] [blastp]
NP_001323002.1 [sequence] [blastp]
NP_001323003.1 [sequence] [blastp]
NP_001323004.1 [sequence] [blastp]
NP_563787.2 [sequence] [blastp]
NP_849605.1 [sequence] [blastp]
Subcellular
localization
wolf
mito 5,  nucl 3,  chlo 2  (predict for NP_001323001.1)
nucl 9,  chlo 1,  plas 1  (predict for NP_001323002.1)
chlo 4,  nucl 2,  cyto 1,  golg 1,  nucl_plas 1  (predict for NP_001323003.1)
chlo 5,  mito 3,  cyto 1,  pero 1,  golg 1,  cyto_pero 1  (predict for NP_001323004.1)
nucl 9,  plas 1,  cysk 1,  cysk_plas 1  (predict for NP_563787.2)
mito 5,  nucl 3,  chlo 2  (predict for NP_849605.1)
Subcellular
localization
TargetP
chlo 6,  mito 5  (predict for NP_001323001.1)
chlo 4  (predict for NP_001323002.1)
chlo 4  (predict for NP_001323003.1)
chlo 6,  mito 6  (predict for NP_001323004.1)
chlo 4  (predict for NP_563787.2)
chlo 6,  mito 5  (predict for NP_849605.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-m.9
for
SR45a
ath-u.5
for
SR45a
ath-r.7
for
SR45a
ath-e.2
for
SR45a
ath-m.4.bio
for
SR45a
ath-m.4.hor
for
SR45a
ath-m.4.lig
for
SR45a
ath-m.4.str
for
SR45a
ath-m.4.tis
for
SR45a
ath-u.5
for
AT4G35785
bra-r.6
for
103843952
bra-r.6
for
103873570
bra-r.6
for
103834931
bna-r.1
for
106351347
bna-r.1
for
106361290
bna-r.1
for
106391120
ghi-r.1
for
107949952
ghi-r.1
for
121215523
ghi-r.1
for
107947042
cit-r.1
for
102631198
cit-r.1
for
102622263
cit-r.1
for
102618370
gma-u.5
for
100499944
gma-u.5
for
100805126
gma-u.5
for
100527350
vvi-u.5
for
100263989
vvi-u.5
for
109122082
vvi-u.5
for
100246735
ppo-u.5
for
7458189
ppo-u.5
for
7468012
ppo-u.5
for
7481499
mtr-u.5
for
11430997
mtr-u.5
for
25490768
mtr-u.5
for
11440544
sly-u.5
for
101246587
sly-u.5
for
101255764
sly-u.5
for
101261529
sot-r.1
for
102582203
sot-r.1
for
102579598
sot-r.1
for
102579367
nta-r.1
for
107780634
nta-r.1
for
107779600
nta-r.1
for
107783926
osa-u.5
for
4332350
osa-u.5
for
4342102
osa-u.5
for
4345455
zma-u.5
for
100282309
zma-u.5
for
100283023
tae-r.2
for
123149730
tae-r.2
for
123085382
tae-r.2
for
123090159
hvu-r.1
for
123450642
hvu-r.1
for
123413361
hvu-r.1
for
123407403
sbi-r.1
for
110431601
sbi-r.1
for
8073514
sbi-r.1
for
8069209
bdi-r.1
for
100833800
bdi-r.1
for
100845877


Ortholog ID: 1634
Species ath ath bra bra bra bna bna bna ghi ghi ghi cit cit cit gma gma vvi vvi vvi ppo ppo ppo mtr mtr mtr sly sly sly sot sot sot nta nta nta osa osa osa zma zma tae tae tae hvu hvu hvu sbi sbi sbi bdi bdi
Symbol SR45a AT4G35785 LOC103843952 LOC103873570 LOC103834931 LOC106391120 LOC106397634 LOC125575291 LOC121215523 LOC107947042 LOC107935791 LOC102631198 LOC102622263 LOC102618370 LOC100805126 LOC100798472 LOC100263989 LOC109122082 LOC100246735 LOC7458189 LOC7481499 LOC18099113 LOC11430997 LOC25490768 LOC11440544 LOC101246587 LOC101255764 LOC101261529 LOC102582203 LOC102579598 LOC102579367 LOC107780634 LOC107779600 LOC107802385 LOC4332350 LOC4342102 LOC4345455 LOC100282309 LOC100283023 LOC123085382 LOC123164493 LOC123156736 LOC123450642 LOC123413361 LOC123407403 LOC110431601 LOC8073514 LOC8069209 LOC100833800 LOC100845877
Function* RNA-binding (RRM/RBD/RNP motifs) family protein RNA-binding (RRM/RBD/RNP motifs) family protein serine/arginine-rich splicing factor SR45a serine/arginine-rich splicing factor SR45a serine/arginine-rich splicing factor SR45a serine/arginine-rich splicing factor SR45a-like serine/arginine-rich splicing factor SR45a serine/arginine-rich splicing factor SR45a-like serine/arginine-rich splicing factor SR45a serine/arginine-rich splicing factor SR45a serine/arginine-rich splicing factor SR45a serine/arginine-rich splicing factor SR45a serine/arginine-rich splicing factor SR45a-like serine/arginine-rich splicing factor SR45a serine/arginine-rich splicing factor SR45a serine/arginine-rich splicing factor SR45a serine/arginine-rich splicing factor SR45a serine/arginine-rich splicing factor SR45a serine/arginine-rich splicing factor SR45a serine/arginine-rich splicing factor SR45a serine/arginine-rich splicing factor SR45a serine/arginine-rich splicing factor SR45a serine/arginine-rich splicing factor SR45a serine/arginine-rich splicing factor SR45a serine/arginine-rich splicing factor SR45a serine/arginine-rich splicing factor SR45a serine/arginine-rich splicing factor SR45a serine/arginine-rich splicing factor SR45a serine/arginine-rich splicing factor SR45a-like serine/arginine-rich splicing factor SR45a-like serine/arginine-rich splicing factor SR45a serine/arginine-rich splicing factor SR45a-like uncharacterized LOC107779600 putative RNA-binding protein C25G10.01 serine/arginine-rich splicing factor SR45a serine/arginine-rich splicing factor SR45a serine/arginine-rich splicing factor SR45a uncharacterized LOC100282309 transformer-2 protein serine/arginine-rich splicing factor SR45a serine/arginine-rich splicing factor SR45a serine/arginine-rich splicing factor SR45a serine/arginine-rich splicing factor SR45a-like serine/arginine-rich splicing factor SR45a-like serine/arginine-rich splicing factor SR45a-like serine/arginine-rich splicing factor SR45a serine/arginine-rich splicing factor SR45a serine/arginine-rich splicing factor SR45a serine/arginine-rich splicing factor SR45a serine/arginine-rich splicing factor SR45a
Coexmap

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
Coexpression

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04141 Protein processing in endoplasmic reticulum 3
ath03040 Spliceosome 3
ath04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 12
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 5
bra04141 Protein processing in endoplasmic reticulum 5
bra00052 Galactose metabolism 2
bra04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 3
bra00280 Valine, leucine and isoleucine degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 5
bna04141 Protein processing in endoplasmic reticulum 2
bna04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 4
ghi03015 mRNA surveillance pathway 2
ghi03272 Virion - Hepatitis viruses 2
ghi04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03040 Spliceosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03040 Spliceosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00040 Pentose and glucuronate interconversions 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 4
vvi03082 ATP-dependent chromatin remodeling 4
vvi03013 Nucleocytoplasmic transport 3
vvi03015 mRNA surveillance pathway 3
vvi03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04141 Protein processing in endoplasmic reticulum 3
vvi03040 Spliceosome 2
vvi04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 2
ppo04120 Ubiquitin mediated proteolysis 2
ppo04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 4
ppo04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03040 Spliceosome 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03040 Spliceosome 3
mtr04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03040 Spliceosome 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03015 mRNA surveillance pathway 4
sly03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 7
sly03015 mRNA surveillance pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04141 Protein processing in endoplasmic reticulum 6
sly03040 Spliceosome 4
sly04144 Endocytosis 2
sly04626 Plant-pathogen interaction 2
sly04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04141 Protein processing in endoplasmic reticulum 8
sot03040 Spliceosome 4
sot04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 5
sot03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 5
nta00510 N-Glycan biosynthesis 2
nta00513 Various types of N-glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 5
nta04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 3
nta00510 N-Glycan biosynthesis 2
nta00513 Various types of N-glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03040 Spliceosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03040 Spliceosome 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03040 Spliceosome 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03040 Spliceosome 7
zma03013 Nucleocytoplasmic transport 4
zma03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 4
tae00270 Cysteine and methionine metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04141 Protein processing in endoplasmic reticulum 4
hvu03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03040 Spliceosome 4
hvu03020 RNA polymerase 2
hvu03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03040 Spliceosome 3
sbi03022 Basal transcription factors 3
sbi03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 6
sbi03040 Spliceosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04144 Endocytosis 5
bdi03040 Spliceosome 3
bdi03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03040 Spliceosome 6
bdi04120 Ubiquitin mediated proteolysis 2
bdi04141 Protein processing in endoplasmic reticulum 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 837246 829732 103843952 103873570 103834931 106391120 106397634 125575291 121215523 107947042 107935791 102631198 102622263 102618370 100805126 100798472 100263989 109122082 100246735 7458189 7481499 18099113 11430997 25490768 11440544 101246587 101255764 101261529 102582203 102579598 102579367 107780634 107779600 107802385 4332350 4342102 4345455 100282309 100283023 123085382 123164493 123156736 123450642 123413361 123407403 110431601 8073514 8069209 100833800 100845877
The preparation time of this page was 0.2 [sec].