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Orthologous genes in OrthoFinder**

Species Gene Description
 sot-r.1   102579367   serine/arginine-rich splicing factor SR45a 
 sly-u.5   101261529   serine/arginine-rich splicing factor SR45a 
 sly-u.5   101246587   serine/arginine-rich splicing factor SR45a 
 sly-u.5   101255764   serine/arginine-rich splicing factor SR45a 
 ath-u.5   AT4G35785   RNA-binding (RRM/RBD/RNP motifs) family protein 
 ath-u.5   SR45a   RNA-binding (RRM/RBD/RNP motifs) family protein 
 gma-u.5   100805126   serine/arginine-rich splicing factor SR45a 
 gma-u.5   100499944   RNA-binding (RRM/RBD/RNP motifs) family protein 
 vvi-u.5   109122082   serine/arginine-rich splicing factor SR45a 
 vvi-u.5   100263989   serine/arginine-rich splicing factor SR45a 
 vvi-u.5   100246735   serine/arginine-rich splicing factor SR45a 
 ppo-u.5   7468012   serine/arginine-rich splicing factor SR45a 
 ppo-u.5   18099113   serine/arginine-rich splicing factor SR45a 
 ppo-u.5   7458189   serine/arginine-rich splicing factor SR45a 
 mtr-u.5   11430997   serine/arginine-rich splicing factor SR45a 
 mtr-u.5   25490768   serine/arginine-rich splicing factor SR45a 
 mtr-u.5   11440544   serine/arginine-rich splicing factor SR45a 
 osa-u.5   4345455   serine/arginine-rich splicing factor SR45a 
 osa-u.5   4332350   serine/arginine-rich splicing factor SR45a 
 osa-u.5   4342102   serine/arginine-rich splicing factor SR45a 
 zma-u.5   100282309   uncharacterized LOC100282309 
 zma-u.5   100283023   transformer-2 protein 

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Top 50 coexpressed genes to 102579367 (sot-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 102579367 (sot-r.1 coexpression data)

CoexMap"102579367"


sotLOC102579367 | Entrez gene ID : 102579367    
Species sot sly ath gma vvi ppo mtr osa zma sbi nta bra cre hvu cit bdi tae bna ghi
Paralog 1 3 2 2 3 3 3 3 2 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG sot03040 [list] [network] Spliceosome (223 genes)
GO BP
GO CC
GO MF
GO:0003723 [list] [network] RNA binding  (1335 genes)  IEA  
Protein XP_015160464.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 9,  mito 1,  plas 1,  mito_plas 1  (predict for XP_015160464.1)
Subcellular
localization
TargetP
chlo 9  (predict for XP_015160464.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sot-r.1
for
102579367

.
sly-u.5
for
101261529

.
sly-u.5
for
101246587

.
sly-u.5
for
101255764

.
ath-u.5
for
AT4G35785

.
ath-u.5
for
SR45a

.
gma-u.5
for
100805126

.
gma-u.5
for
100499944

.
vvi-u.5
for
109122082

.
vvi-u.5
for
100263989

.
vvi-u.5
for
100246735

.
ppo-u.5
for
7468012

.
ppo-u.5
for
18099113

.
ppo-u.5
for
7458189

.
mtr-u.5
for
11430997

.
mtr-u.5
for
25490768

.
mtr-u.5
for
11440544

.
osa-u.5
for
4345455

.
osa-u.5
for
4332350

.
osa-u.5
for
4342102

.
zma-u.5
for
100282309

.
zma-u.5
for
100283023

.


Ortholog ID: 1634
Species ath ath gma gma sly sly osa osa zma zma bra bra vvi vvi ppo ppo mtr mtr tae tae hvu hvu ghi ghi bna bna sbi sbi sot sot cit cit bdi nta nta
Symbol AT4G35785 SR45a LOC100805126 LOC100798472 LOC101255764 LOC101246587 LOC4332350 LOC4342102 LOC100283023 LOC100282309 LOC103873570 LOC103834931 LOC109122082 LOC100263989 LOC7458189 LOC7481499 LOC25490768 LOC11430997 LOC123156736 LOC123085382 LOC123450642 LOC123407403 LOC107947042 LOC121215523 LOC106391120 LOC125575291 LOC8073514 LOC8069209 LOC102579598 LOC102579367 LOC102618370 LOC102631198 LOC100833800 LOC107779600 LOC107802385
Function* RNA-binding (RRM/RBD/RNP motifs) family protein RNA-binding (RRM/RBD/RNP motifs) family protein serine/arginine-rich splicing factor SR45a serine/arginine-rich splicing factor SR45a serine/arginine-rich splicing factor SR45a serine/arginine-rich splicing factor SR45a serine/arginine-rich splicing factor SR45a serine/arginine-rich splicing factor SR45a transformer-2 protein uncharacterized LOC100282309 serine/arginine-rich splicing factor SR45a serine/arginine-rich splicing factor SR45a serine/arginine-rich splicing factor SR45a serine/arginine-rich splicing factor SR45a serine/arginine-rich splicing factor SR45a serine/arginine-rich splicing factor SR45a serine/arginine-rich splicing factor SR45a serine/arginine-rich splicing factor SR45a serine/arginine-rich splicing factor SR45a serine/arginine-rich splicing factor SR45a serine/arginine-rich splicing factor SR45a-like serine/arginine-rich splicing factor SR45a-like serine/arginine-rich splicing factor SR45a serine/arginine-rich splicing factor SR45a serine/arginine-rich splicing factor SR45a-like serine/arginine-rich splicing factor SR45a-like serine/arginine-rich splicing factor SR45a serine/arginine-rich splicing factor SR45a serine/arginine-rich splicing factor SR45a-like serine/arginine-rich splicing factor SR45a serine/arginine-rich splicing factor SR45a serine/arginine-rich splicing factor SR45a serine/arginine-rich splicing factor SR45a uncharacterized LOC107779600 putative RNA-binding protein C25G10.01
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 12
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04141 Protein processing in endoplasmic reticulum 3
ath03040 Spliceosome 3
ath04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00040 Pentose and glucuronate interconversions 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 7
sly03015 mRNA surveillance pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03015 mRNA surveillance pathway 4
sly03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03040 Spliceosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03040 Spliceosome 7
zma03013 Nucleocytoplasmic transport 4
zma03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03040 Spliceosome 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 3
bra00280 Valine, leucine and isoleucine degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 4
vvi03082 ATP-dependent chromatin remodeling 4
vvi03013 Nucleocytoplasmic transport 3
vvi03015 mRNA surveillance pathway 3
vvi03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 2
ppo04120 Ubiquitin mediated proteolysis 2
ppo04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 4
ppo04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03040 Spliceosome 3
mtr04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03040 Spliceosome 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 4
tae00270 Cysteine and methionine metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04141 Protein processing in endoplasmic reticulum 4
hvu03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 4
ghi03015 mRNA surveillance pathway 2
ghi03272 Virion - Hepatitis viruses 2
ghi04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03040 Spliceosome 3
sbi03022 Basal transcription factors 3
sbi03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 6
sbi03040 Spliceosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 5
sot03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03040 Spliceosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03040 Spliceosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04144 Endocytosis 5
bdi03040 Spliceosome 3
bdi03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 5
nta04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 3
nta00510 N-Glycan biosynthesis 2
nta00513 Various types of N-glycan biosynthesis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 829732 837246 100805126 100798472 101255764 101246587 4332350 4342102 100283023 100282309 103873570 103834931 109122082 100263989 7458189 7481499 25490768 11430997 123156736 123085382 123450642 123407403 107947042 121215523 106391120 125575291 8073514 8069209 102579598 102579367 102618370 102631198 100833800 107779600 107802385
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