ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
ath-m.9	HAI2	highly ABA-induced PP2C protein 2
ath-u.5	HAI2	highly ABA-induced PP2C protein 2
ath-r.7	HAI2	highly ABA-induced PP2C protein 2
ath-e.2	HAI2	highly ABA-induced PP2C protein 2
ath-m.4.bio	HAI2	highly ABA-induced PP2C protein 2
ath-m.4.hor	HAI2	highly ABA-induced PP2C protein 2
ath-m.4.lig	HAI2	highly ABA-induced PP2C protein 2
ath-m.4.str	HAI2	highly ABA-induced PP2C protein 2
ath-m.4.tis	HAI2	highly ABA-induced PP2C protein 2
ath-u.5	HAI3	highly ABA-induced PP2C protein 3
ath-u.5	PP2CA	protein phosphatase 2CA
ath-u.5	HAI1	PP2C protein (Clade A protein phosphatases type 2C)
bra-r.6	103845336	probable protein phosphatase 2C 78
bra-r.6	103845976	protein phosphatase 2C 37
bra-r.6	103843457	protein phosphatase 2C 3
bna-r.1	125591349	protein phosphatase 2C 3-like
bna-r.1	111215747	protein phosphatase 2C 37
ghi-r.1	107949971	probable protein phosphatase 2C 24
ghi-r.1	107937605	protein phosphatase 2C 51
cit-r.1	102621444	protein phosphatase 2C 51-like
cit-r.1	102611031	probable protein phosphatase 2C 24
cit-r.1	102629888	protein phosphatase 2C 37
gma-u.5	100818568	probable protein phosphatase 2C 8
gma-u.5	100813248	probable protein phosphatase 2C 8
gma-u.5	100807302	protein phosphatase 2C 37
vvi-u.5	100267287	protein phosphatase 2C 51
vvi-u.5	100255251	probable protein phosphatase 2C 24
ppo-u.5	7467562	protein phosphatase 2C 37
ppo-u.5	7485683	probable protein phosphatase 2C 24
ppo-u.5	112324315	protein phosphatase 2C 51
mtr-u.5	11435594	protein phosphatase 2C 37
mtr-u.5	11436220	probable protein phosphatase 2C 8
mtr-u.5	25482353	protein phosphatase 2C 51
sly-u.5	101244003	probable protein phosphatase 2C 24
sly-u.5	101248778	protein phosphatase 2C 37
sly-u.5	101249794	protein phosphatase 2C 51-like
sot-r.1	102582408	probable protein phosphatase 2C 51
sot-r.1	102596252	protein phosphatase 2C 37-like
nta-r.1	107779894	protein phosphatase 2C 37-like
nta-r.1	107819422	protein phosphatase 2C 51
osa-u.5	4339671	protein phosphatase 2C 51-like
osa-u.5	4332374	probable protein phosphatase 2C 30
osa-u.5	4327465	probable protein phosphatase 2C 9
zma-u.5	100381666	uncharacterized LOC100381666
zma-u.5	100279578	uncharacterized LOC100279578
zma-u.5	100282657	uncharacterized LOC100282657
tae-r.2	123071396	probable protein phosphatase 2C 9
tae-r.2	123078700	probable protein phosphatase 2C 8
tae-r.2	123070252	probable protein phosphatase 2C 8
hvu-r.1	123444909	probable protein phosphatase 2C 9
hvu-r.1	123449042	probable protein phosphatase 2C 30
hvu-r.1	123420258	protein phosphatase 2C 51-like
sbi-r.1	8084948	probable protein phosphatase 2C 30
sbi-r.1	8054565	probable protein phosphatase 2C 68
sbi-r.1	8058260	probable protein phosphatase 2C 8
bdi-r.1	100838998	probable protein phosphatase 2C 8
bdi-r.1	100834162	probable protein phosphatase 2C 30
cre-r.1	CHLRE_03g211073v5	uncharacterized protein

Top 50 coexpressed genes to HAI2 (ath-m.9 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to HAI2 (ath-m.9 coexpression data)

CoexMap"837255"

[Cytoscape]

Annotation

functional annotation

KEGG

ath04016 [list] [network] MAPK signaling pathway - plant (146 genes)

ath04075 [list] [network] Plant hormone signal transduction (433 genes)

GO BP

GO:1902039 [list] [network] negative regulation of seed dormancy process	(2 genes)	IMP
GO:0048838 [list] [network] release of seed from dormancy	(7 genes)	IMP
GO:0009939 [list] [network] positive regulation of gibberellic acid mediated signaling pathway	(9 genes)	IMP
GO:0010030 [list] [network] positive regulation of seed germination	(25 genes)	IMP
GO:0009788 [list] [network] negative regulation of abscisic acid-activated signaling pathway	(62 genes)	IMP

GO CC

GO:0009507 [list] [network] chloroplast

(5014 genes)

ISM

GO MF

GO:0005515 [list] [network] protein binding

(5363 genes)

IPI

Protein

NP_172223.1 [sequence] [blastp]

Subcellular
localization
wolf

nucl 6, cyto_nucl 4, cysk 1, cyto 1, chlo 1, extr 1, cysk_plas 1

(predict for NP_172223.1)

Subcellular
localization
TargetP

other 7

(predict for NP_172223.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target				Condition-specific^*					Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	ath-m.9 for HAI2	ath-u.5 for HAI2	ath-r.7 for HAI2	ath-e.2 for HAI2	ath-m.4.bio for HAI2	ath-m.4.hor for HAI2	ath-m.4.lig for HAI2	ath-m.4.str for HAI2	ath-m.4.tis for HAI2	ath-u.5 for HAI3	ath-u.5 for PP2CA	ath-u.5 for HAI1	bra-r.6 for 103845336	bra-r.6 for 103845976	bra-r.6 for 103843457	bna-r.1 for 125591349	bna-r.1 for 111215747	ghi-r.1 for 107949971	ghi-r.1 for 107937605	cit-r.1 for 102621444	cit-r.1 for 102611031	cit-r.1 for 102629888	gma-u.5 for 100818568	gma-u.5 for 100813248	gma-u.5 for 100807302	vvi-u.5 for 100267287	vvi-u.5 for 100255251	ppo-u.5 for 7467562	ppo-u.5 for 7485683	ppo-u.5 for 112324315	mtr-u.5 for 11435594	mtr-u.5 for 11436220	mtr-u.5 for 25482353	sly-u.5 for 101244003	sly-u.5 for 101248778	sly-u.5 for 101249794	sot-r.1 for 102582408	sot-r.1 for 102596252	nta-r.1 for 107779894	nta-r.1 for 107819422	osa-u.5 for 4339671	osa-u.5 for 4332374	osa-u.5 for 4327465	zma-u.5 for 100381666	zma-u.5 for 100279578	zma-u.5 for 100282657	tae-r.2 for 123071396	tae-r.2 for 123078700	tae-r.2 for 123070252	hvu-r.1 for 123444909	hvu-r.1 for 123449042	hvu-r.1 for 123420258	sbi-r.1 for 8084948	sbi-r.1 for 8054565	sbi-r.1 for 8058260	bdi-r.1 for 100838998	bdi-r.1 for 100834162	cre-r.1 for CHLRE_03g211073v5

Ortholog

Ortholog ID: 501

Species

ath

bra

bna

ghi

cit

gma

vvi

ppo

mtr

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

cre

Symbol

HAI2

HAI3

PP2CA

Function^*

highly ABA-induced PP2C protein 2

highly ABA-induced PP2C protein 3

protein phosphatase 2CA

protein phosphatase 2C 37

protein phosphatase 2C 3

protein phosphatase 2C 3-like

protein phosphatase 2C 37

probable protein phosphatase 2C 78

protein phosphatase 2C 51

probable protein phosphatase 2C 24

protein phosphatase 2C 51-like

probable protein phosphatase 2C 24

protein phosphatase 2C 37

probable protein phosphatase 2C 51

protein phosphatase 2C 37

protein phosphatase 2C 51

probable protein phosphatase 2C 24

protein phosphatase 2C 37

protein phosphatase 2C 51

protein phosphatase 2C 37

probable protein phosphatase 2C 8

protein phosphatase 2C 51

protein phosphatase 2C 37

protein phosphatase 2C 51-like

probable protein phosphatase 2C 51

probable protein phosphatase 2C 24

protein phosphatase 2C 37-like

probable protein phosphatase 2C 30

probable protein phosphatase 2C 9

probable protein phosphatase 2C 49

uncharacterized LOC100279578

uncharacterized LOC100282657

uncharacterized LOC103636504

probable protein phosphatase 2C 8

probable protein phosphatase 2C 68

protein phosphatase 2C 51-like

probable protein phosphatase 2C 68

probable protein phosphatase 2C 8

probable protein phosphatase 2C 68

probable protein phosphatase 2C 9

uncharacterized LOC110432288

probable protein phosphatase 2C 8

probable protein phosphatase 2C 68

uncharacterized protein

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04016	MAPK signaling pathway - plant	6
ath04075	Plant hormone signal transduction	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04016	MAPK signaling pathway - plant	3
ath04075	Plant hormone signal transduction	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04075	Plant hormone signal transduction	8
ath04016	MAPK signaling pathway - plant	7

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04016	MAPK signaling pathway - plant	5
bra04075	Plant hormone signal transduction	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04016	MAPK signaling pathway - plant	3
bra04075	Plant hormone signal transduction	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04016	MAPK signaling pathway - plant	4
bra04075	Plant hormone signal transduction	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna04016	MAPK signaling pathway - plant	6
bna04075	Plant hormone signal transduction	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna04016	MAPK signaling pathway - plant	4
bna04075	Plant hormone signal transduction	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna04016	MAPK signaling pathway - plant	6
bna04075	Plant hormone signal transduction	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04016	MAPK signaling pathway - plant	3
ghi04075	Plant hormone signal transduction	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04016	MAPK signaling pathway - plant	4
ghi04075	Plant hormone signal transduction	4
ghi00500	Starch and sucrose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04016	MAPK signaling pathway - plant	2
ghi04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit04016	MAPK signaling pathway - plant	4
cit04075	Plant hormone signal transduction	4
cit00906	Carotenoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit04016	MAPK signaling pathway - plant	5
cit04075	Plant hormone signal transduction	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit04075	Plant hormone signal transduction	7
cit04016	MAPK signaling pathway - plant	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04016	MAPK signaling pathway - plant	3
gma04075	Plant hormone signal transduction	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04016	MAPK signaling pathway - plant	4
gma04075	Plant hormone signal transduction	4
gma00500	Starch and sucrose metabolism	2
gma02010	ABC transporters	2
gma04981	Folate transport and metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04016	MAPK signaling pathway - plant	5
gma04075	Plant hormone signal transduction	5
gma00500	Starch and sucrose metabolism	2
gma02010	ABC transporters	2
gma04981	Folate transport and metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi04016	MAPK signaling pathway - plant	4
vvi04075	Plant hormone signal transduction	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi04016	MAPK signaling pathway - plant	4
vvi04075	Plant hormone signal transduction	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04075	Plant hormone signal transduction	7
ppo04016	MAPK signaling pathway - plant	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04075	Plant hormone signal transduction	8
ppo04016	MAPK signaling pathway - plant	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04016	MAPK signaling pathway - plant	4
ppo04075	Plant hormone signal transduction	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr04075	Plant hormone signal transduction	6
mtr04016	MAPK signaling pathway - plant	5
mtr00562	Inositol phosphate metabolism	2
mtr04070	Phosphatidylinositol signaling system	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr04016	MAPK signaling pathway - plant	2
mtr04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr04016	MAPK signaling pathway - plant	3
mtr04075	Plant hormone signal transduction	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly04075	Plant hormone signal transduction	6
sly04016	MAPK signaling pathway - plant	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly04016	MAPK signaling pathway - plant	3
sly04075	Plant hormone signal transduction	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot04016	MAPK signaling pathway - plant	6
sot04075	Plant hormone signal transduction	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot04075	Plant hormone signal transduction	7
sot04016	MAPK signaling pathway - plant	6
sot00564	Glycerophospholipid metabolism	2
sot00565	Ether lipid metabolism	2
sot04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04016	MAPK signaling pathway - plant	8
nta04075	Plant hormone signal transduction	8

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04075	Plant hormone signal transduction	8
nta04016	MAPK signaling pathway - plant	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04016	MAPK signaling pathway - plant	8
nta04075	Plant hormone signal transduction	8

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa04075	Plant hormone signal transduction	8
osa04016	MAPK signaling pathway - plant	6
osa00906	Carotenoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa04075	Plant hormone signal transduction	7
osa04016	MAPK signaling pathway - plant	6
osa00906	Carotenoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa04075	Plant hormone signal transduction	8
osa04016	MAPK signaling pathway - plant	6
osa00906	Carotenoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04075	Plant hormone signal transduction	11
zma04016	MAPK signaling pathway - plant	10

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04075	Plant hormone signal transduction	8
zma04016	MAPK signaling pathway - plant	7
zma00906	Carotenoid biosynthesis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04016	MAPK signaling pathway - plant	9
zma04075	Plant hormone signal transduction	9
zma00906	Carotenoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04016	MAPK signaling pathway - plant	12
tae04075	Plant hormone signal transduction	12

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04016	MAPK signaling pathway - plant	9
tae04075	Plant hormone signal transduction	9
tae00906	Carotenoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04016	MAPK signaling pathway - plant	12
tae04075	Plant hormone signal transduction	12

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu04016	MAPK signaling pathway - plant	2
hvu04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu04075	Plant hormone signal transduction	5
hvu00310	Lysine degradation	3
hvu04016	MAPK signaling pathway - plant	3
hvu00010	Glycolysis / Gluconeogenesis	2
hvu00620	Pyruvate metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi04016	MAPK signaling pathway - plant	5
sbi04075	Plant hormone signal transduction	5
sbi00906	Carotenoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi04075	Plant hormone signal transduction	8
sbi04016	MAPK signaling pathway - plant	7

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi04016	MAPK signaling pathway - plant	4
sbi04075	Plant hormone signal transduction	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi04075	Plant hormone signal transduction	5
bdi04016	MAPK signaling pathway - plant	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi04075	Plant hormone signal transduction	6
bdi04016	MAPK signaling pathway - plant	5

Expression

Expression pattern

Entrez Gene ID^*

837255

817487

820314

103845976

103843457

103843946

125591349

106452531

106433287

107937605

107906580

121215534

102621444

102611031

102629888

100807235

100796161

100781388

100267287

100255251

7467562

7458124

7489826

11435594

11436220

25482353

101248778

101249794

102582408

102601835

107779894

107803211

107760683

4332374

4327465

9270549

100279578

100282657

103636504

123078700

123103505

123111722

123420258

123395405

123444003

8054565

8058897

110432288

100838998

100823313

5724961

The preparation time of this page was 0.3 [sec].


Species	ath	bra	bna	ghi	cit	gma	vvi	ppo	mtr	sly	sot	nta	osa	zma	tae	hvu	sbi	bdi	cre
Paralog	12	3	2	2	3	3	2	3	3	3	2	2	3	3	3	3	3	2	1

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to HAI2 (ath-m.9 coexpression data)

Top 50 enrichment test to HAI2 (ath-m.9 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**