Select Species**


OK


Orthologous genes in OrthoFinder**

Species Gene Description
 ath-m.9   emb2411   DNA replication helicase 
 ath-u.5   emb2411   DNA replication helicase 
 ath-r.7   emb2411   DNA replication helicase 
 ath-e.2   emb2411   DNA replication helicase 
 ath-m.4.bio   emb2411   DNA replication helicase 
 ath-m.4.hor   emb2411   DNA replication helicase 
 ath-m.4.lig   emb2411   DNA replication helicase 
 ath-m.4.str   emb2411   DNA replication helicase 
 ath-m.4.tis   emb2411   DNA replication helicase 
 bra-r.6   103843376   DNA replication ATP-dependent helicase/nuclease JHS1 
 bna-r.1   106377018   DNA replication ATP-dependent helicase/nuclease JHS1-like 
 bna-r.1   106420166   DNA replication ATP-dependent helicase/nuclease JHS1 
 ghi-r.1   107948602   DNA replication ATP-dependent helicase/nuclease JHS1 
 ghi-r.1   107896297   DNA replication ATP-dependent helicase/nuclease JHS1 
 cit-r.1   102608255   DNA replication ATP-dependent helicase/nuclease JHS1 
 gma-u.5   100799415   DNA replication ATP-dependent helicase/nuclease JHS1 
 vvi-u.5   100247844   DNA replication ATP-dependent helicase/nuclease JHS1 
 ppo-u.5   7463392   DNA replication ATP-dependent helicase/nuclease JHS1 
 mtr-u.5   25498012   DNA replication ATP-dependent helicase/nuclease JHS1 
 sly-u.5   101244042   DNA replication ATP-dependent helicase/nuclease JHS1 
 sot-r.1   102578342   DNA replication ATP-dependent helicase/nuclease DNA2 
 nta-r.1   107821610   DNA replication ATP-dependent helicase/nuclease JHS1 
 nta-r.1   107766417   DNA replication ATP-dependent helicase/nuclease JHS1-like 
 nta-r.1   107759114   DNA replication ATP-dependent helicase/nuclease JHS1 
 osa-u.5   4336807   DNA replication ATP-dependent helicase/nuclease JHS1 
 zma-u.5   103648427   DNA replication ATP-dependent helicase/nuclease JHS1 
 tae-r.2   123190382   DNA replication ATP-dependent helicase/nuclease JHS1 
 tae-r.2   123046668   DNA replication ATP-dependent helicase/nuclease JHS1 
 hvu-r.1   123427867   DNA replication ATP-dependent helicase/nuclease JHS1 
 sbi-r.1   8071074   DNA replication ATP-dependent helicase/nuclease DNA2 
 bdi-r.1   100823226   DNA replication ATP-dependent helicase/nuclease DNA2 
 cre-r.1   CHLRE_12g528200v5   uncharacterized protein 

close


Top 50 coexpressed genes to emb2411 (ath-m.9 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

close

close

Top 50 enrichment test to emb2411 (ath-m.9 coexpression data)

CoexMap"837406"


athemb2411 | Entrez gene ID : 837406      
Species ath bra bna ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 9 1 2 2 1 1 1 1 1 1 1 3 1 1 2 1 1 1 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG ath03030 [list] [network] DNA replication (43 genes)
GO BP
GO:0006260 [list] [network] DNA replication  (66 genes)  IMP  
GO:0010073 [list] [network] meristem maintenance  (197 genes)  IMP  
GO:0006281 [list] [network] DNA repair  (203 genes)  IMP  
GO:0006974 [list] [network] DNA damage response  (246 genes)  IMP  
GO:0009793 [list] [network] embryo development ending in seed dormancy  (569 genes)  NAS  
GO CC
GO:0005634 [list] [network] nucleus  (10367 genes)  IDA ISM  
GO MF
GO:0017116 [list] [network] single-stranded DNA helicase activity  (1 genes)  IEA  
GO:0003678 [list] [network] DNA helicase activity  (15 genes)  IEA  
GO:0004386 [list] [network] helicase activity  (62 genes)  IEA  
Protein NP_001184943.1 [sequence] [blastp]
NP_001318959.1 [sequence] [blastp]
NP_001322071.1 [sequence] [blastp]
NP_001322072.1 [sequence] [blastp]
NP_001322073.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 5,  mito 2,  nucl 1,  cysk_nucl 1,  mito_plas 1  (predict for NP_001184943.1)
chlo 6,  nucl 1,  mito 1,  cysk_nucl 1  (predict for NP_001318959.1)
chlo 4,  nucl 4,  mito 1,  cyto_nucl 1,  nucl_plas 1  (predict for NP_001322071.1)
chlo 5,  mito 2,  nucl 1,  cysk_nucl 1,  mito_plas 1  (predict for NP_001322072.1)
chlo 5,  mito 2,  nucl 1,  cysk_nucl 1,  mito_plas 1  (predict for NP_001322073.1)
Subcellular
localization
TargetP
chlo 9  (predict for NP_001184943.1)
chlo 9  (predict for NP_001318959.1)
chlo 9  (predict for NP_001322071.1)
chlo 9  (predict for NP_001322072.1)
chlo 9  (predict for NP_001322073.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-m.9
for
emb2411
ath-u.5
for
emb2411
ath-r.7
for
emb2411
ath-e.2
for
emb2411
ath-m.4.bio
for
emb2411
ath-m.4.hor
for
emb2411
ath-m.4.lig
for
emb2411
ath-m.4.str
for
emb2411
ath-m.4.tis
for
emb2411
bra-r.6
for
103843376
bna-r.1
for
106377018
bna-r.1
for
106420166
ghi-r.1
for
107948602
ghi-r.1
for
107896297
cit-r.1
for
102608255
gma-u.5
for
100799415
vvi-u.5
for
100247844
ppo-u.5
for
7463392
mtr-u.5
for
25498012
sly-u.5
for
101244042
sot-r.1
for
102578342
nta-r.1
for
107821610
nta-r.1
for
107766417
nta-r.1
for
107759114
osa-u.5
for
4336807
zma-u.5
for
103648427
tae-r.2
for
123190382
tae-r.2
for
123046668
hvu-r.1
for
123427867
sbi-r.1
for
8071074
bdi-r.1
for
100823226
cre-r.1
for
CHLRE_12g528200v5


Ortholog ID: 9765
Species ath bra bna bna ghi ghi cit gma vvi ppo mtr sly sot nta nta nta osa zma tae tae hvu sbi bdi cre
Symbol emb2411 LOC103843376 LOC106377018 LOC106420166 LOC107948602 LOC107896297 LOC102608255 LOC100799415 LOC100247844 LOC7463392 LOC25498012 LOC101244042 LOC102578342 LOC107821610 LOC107759114 LOC142171427 LOC4336807 LOC103648427 LOC123190382 LOC123046668 LOC123427867 LOC8071074 LOC100823226 CHLRE_12g528200v5
Function* DNA replication helicase DNA replication ATP-dependent helicase/nuclease JHS1 DNA replication ATP-dependent helicase/nuclease JHS1-like DNA replication ATP-dependent helicase/nuclease JHS1 DNA replication ATP-dependent helicase/nuclease JHS1 DNA replication ATP-dependent helicase/nuclease JHS1 DNA replication ATP-dependent helicase/nuclease JHS1 DNA replication ATP-dependent helicase/nuclease JHS1 DNA replication ATP-dependent helicase/nuclease JHS1 DNA replication ATP-dependent helicase/nuclease JHS1 DNA replication ATP-dependent helicase/nuclease JHS1 DNA replication ATP-dependent helicase/nuclease JHS1 DNA replication ATP-dependent helicase/nuclease DNA2 DNA replication ATP-dependent helicase/nuclease JHS1 DNA replication ATP-dependent helicase/nuclease JHS1 DNA replication ATP-dependent helicase/nuclease JHS1-like DNA replication ATP-dependent helicase/nuclease JHS1 DNA replication ATP-dependent helicase/nuclease JHS1 DNA replication ATP-dependent helicase/nuclease JHS1 DNA replication ATP-dependent helicase/nuclease JHS1 DNA replication ATP-dependent helicase/nuclease JHS1 DNA replication ATP-dependent helicase/nuclease DNA2 DNA replication ATP-dependent helicase/nuclease DNA2 uncharacterized protein
Coexmap

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
Coexpression

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03460 Fanconi anemia pathway 3
ath04120 Ubiquitin mediated proteolysis 3
ath03430 Mismatch repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 2
bra03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 8
bna04814 Motor proteins 2
bna03018 RNA degradation 2
bna03030 DNA replication 2
bna03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 6
bna04814 Motor proteins 2
bna03030 DNA replication 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03030 DNA replication 12
ghi03410 Base excision repair 2
ghi03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03030 DNA replication 12
ghi03410 Base excision repair 2
ghi03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04142 Lysosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03030 DNA replication 13
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03030 DNA replication 5
vvi03410 Base excision repair 2
vvi03420 Nucleotide excision repair 2
vvi03440 Homologous recombination 2
vvi03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03030 DNA replication 3
ppo03430 Mismatch repair 3
ppo03410 Base excision repair 2
ppo03420 Nucleotide excision repair 2
ppo03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03440 Homologous recombination 4
mtr03030 DNA replication 2
mtr03460 Fanconi anemia pathway 2
mtr00230 Purine metabolism 2
mtr00240 Pyrimidine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03030 DNA replication 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03030 DNA replication 10
sot03440 Homologous recombination 3
sot03460 Fanconi anemia pathway 3
sot03430 Mismatch repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03030 DNA replication 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03030 DNA replication 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03030 DNA replication 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03030 DNA replication 4
zma03440 Homologous recombination 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03030 DNA replication 7
tae00240 Pyrimidine metabolism 3
tae01232 Nucleotide metabolism 3
tae00230 Purine metabolism 2
tae00480 Glutathione metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03030 DNA replication 7
bdi03440 Homologous recombination 3
bdi03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre00500 Starch and sucrose metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 837406 103843376 106377018 106420166 107948602 107896297 102608255 100799415 100247844 7463392 25498012 101244042 102578342 107821610 107759114 142171427 4336807 103648427 123190382 123046668 123427867 8071074 100823226 66055640
The preparation time of this page was 0.2 [sec].