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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-m.9   CLPP5   nuclear encoded CLP protease 5 
 ath-u.5   CLPP5   nuclear encoded CLP protease 5 
 ath-r.7   CLPP5   nuclear encoded CLP protease 5 
 ath-e.2   CLPP5   nuclear encoded CLP protease 5 
 ath-m.4.bio   CLPP5   nuclear encoded CLP protease 5 
 ath-m.4.hor   CLPP5   nuclear encoded CLP protease 5 
 ath-m.4.lig   CLPP5   nuclear encoded CLP protease 5 
 ath-m.4.str   CLPP5   nuclear encoded CLP protease 5 
 ath-m.4.tis   CLPP5   nuclear encoded CLP protease 5 
 bra-r.6   103844577   ATP-dependent Clp protease proteolytic subunit 5, chloroplastic 
 bra-r.6   103836649   ATP-dependent Clp protease proteolytic subunit 5, chloroplastic 
 bna-r.1   106401269   ATP-dependent Clp protease proteolytic subunit 5, chloroplastic 
 bna-r.1   106370909   ATP-dependent Clp protease proteolytic subunit 5, chloroplastic 
 bna-r.1   125591783   ATP-dependent Clp protease proteolytic subunit 5, chloroplastic-like 
 ghi-r.1   107912314   ATP-dependent Clp protease proteolytic subunit 5, chloroplastic 
 ghi-r.1   107924745   ATP-dependent Clp protease proteolytic subunit 5, chloroplastic 
 ghi-r.1   107946002   ATP-dependent Clp protease proteolytic subunit 5, chloroplastic 
 cit-r.1   102622645   ATP-dependent Clp protease proteolytic subunit 5, chloroplastic-like 
 cit-r.1   102607512   ATP-dependent Clp protease proteolytic subunit 5, chloroplastic 
 gma-u.5   100802533   ATP-dependent Clp protease proteolytic subunit 5, chloroplastic 
 gma-u.5   100798621   ATP-dependent Clp protease proteolytic subunit 5, chloroplastic-like 
 vvi-u.5   100246849   ATP-dependent Clp protease proteolytic subunit 5, chloroplastic 
 ppo-u.5   7455425   ATP-dependent Clp protease proteolytic subunit 5, chloroplastic 
 ppo-u.5   7481404   ATP-dependent Clp protease proteolytic subunit 5, chloroplastic 
 mtr-u.5   11426620   ATP-dependent Clp protease proteolytic subunit 5, chloroplastic 
 mtr-u.5   11412270   ATP-dependent Clp protease proteolytic subunit 5, chloroplastic 
 sly-u.5   clpP2   Clp protease 2 proteolytic subunit 
 sot-r.1   102579725   ATP-dependent Clp protease proteolytic subunit 5, chloroplastic 
 nta-r.1   107771859   ATP-dependent Clp protease proteolytic subunit 5, chloroplastic-like 
 nta-r.1   107809867   ATP-dependent Clp protease proteolytic subunit 5, chloroplastic 
 nta-r.1   107777151   ATP-dependent Clp protease proteolytic subunit 5, chloroplastic 
 osa-u.5   4332615   ATP-dependent Clp protease proteolytic subunit 5, chloroplastic 
 zma-u.5   103634566   ATP-dependent Clp protease proteolytic subunit 5, chloroplastic-like 
 zma-u.5   100194286   uncharacterized LOC100194286 
 tae-r.2   123085673   ATP-dependent Clp protease proteolytic subunit 5, chloroplastic 
 tae-r.2   123092330   ATP-dependent Clp protease proteolytic subunit 5, chloroplastic 
 tae-r.2   123097672   ATP-dependent Clp protease proteolytic subunit 5, chloroplastic 
 hvu-r.1   123448819   ATP-dependent Clp protease proteolytic subunit 5, chloroplastic 
 sbi-r.1   8083988   ATP-dependent Clp protease proteolytic subunit 5, chloroplastic 
 bdi-r.1   100831676   ATP-dependent Clp protease proteolytic subunit 5, chloroplastic 
 cre-r.1   CHLRE_12g486100v5   uncharacterized protein 

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Top 50 coexpressed genes to CLPP5 (ath-m.9 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to CLPP5 (ath-m.9 coexpression data)

CoexMap"839433"


athCLPP5 | Entrez gene ID : 839433      
Species ath bra bna ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 9 2 3 3 2 2 1 2 2 1 1 3 1 2 3 1 1 1 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO:0009840 [list] [network] chloroplastic endopeptidase Clp complex  (8 genes)  IDA  
GO:0009534 [list] [network] chloroplast thylakoid  (417 genes)  IDA  
GO:0009579 [list] [network] thylakoid  (507 genes)  HDA  
GO:0009941 [list] [network] chloroplast envelope  (585 genes)  HDA  
GO:0009570 [list] [network] chloroplast stroma  (693 genes)  HDA IDA  
GO:0009532 [list] [network] plastid stroma  (704 genes)  IDA  
GO:0005576 [list] [network] extracellular region  (3158 genes)  HDA  
GO:0009507 [list] [network] chloroplast  (5014 genes)  HDA ISM  
GO MF
Protein NP_563657.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 9,  nucl 1,  extr 1  (predict for NP_563657.1)
Subcellular
localization
TargetP
chlo 9  (predict for NP_563657.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-m.9
for
CLPP5
ath-u.5
for
CLPP5
ath-r.7
for
CLPP5
ath-e.2
for
CLPP5
ath-m.4.bio
for
CLPP5
ath-m.4.hor
for
CLPP5
ath-m.4.lig
for
CLPP5
ath-m.4.str
for
CLPP5
ath-m.4.tis
for
CLPP5
bra-r.6
for
103844577
bra-r.6
for
103836649
bna-r.1
for
106401269
bna-r.1
for
106370909
bna-r.1
for
125591783
ghi-r.1
for
107912314
ghi-r.1
for
107924745
ghi-r.1
for
107946002
cit-r.1
for
102622645
cit-r.1
for
102607512
gma-u.5
for
100802533
gma-u.5
for
100798621
vvi-u.5
for
100246849
ppo-u.5
for
7455425
ppo-u.5
for
7481404
mtr-u.5
for
11426620
mtr-u.5
for
11412270
sly-u.5
for
clpP2
sot-r.1
for
102579725
nta-r.1
for
107771859
nta-r.1
for
107809867
nta-r.1
for
107777151
osa-u.5
for
4332615
zma-u.5
for
103634566
zma-u.5
for
100194286
tae-r.2
for
123085673
tae-r.2
for
123092330
tae-r.2
for
123097672
hvu-r.1
for
123448819
sbi-r.1
for
8083988
bdi-r.1
for
100831676
cre-r.1
for
CHLRE_12g486100v5


Ortholog ID: 5417
Species ath bra bra bna bna bna ghi ghi ghi cit cit gma gma vvi ppo ppo mtr mtr sly sot nta nta nta osa zma zma tae tae tae hvu sbi bdi cre
Symbol CLPP5 LOC103844577 LOC103836649 LOC106370909 LOC125591783 LOC106401510 LOC107924745 LOC107946002 LOC121210928 LOC102622645 LOC102607512 LOC100802533 LOC100798621 LOC100246849 LOC7455425 LOC7481404 LOC11426620 LOC11412270 clpP2 LOC102579725 LOC107771859 LOC107809867 LOC107777151 LOC4332615 LOC103634566 LOC100194286 LOC123085673 LOC123092330 LOC123097672 LOC123448819 LOC8083988 LOC100831676 CHLRE_12g486100v5
Function* nuclear encoded CLP protease 5 ATP-dependent Clp protease proteolytic subunit 5, chloroplastic ATP-dependent Clp protease proteolytic subunit 5, chloroplastic ATP-dependent Clp protease proteolytic subunit 5, chloroplastic ATP-dependent Clp protease proteolytic subunit 5, chloroplastic-like ATP-dependent Clp protease proteolytic subunit 5, chloroplastic ATP-dependent Clp protease proteolytic subunit 5, chloroplastic ATP-dependent Clp protease proteolytic subunit 5, chloroplastic ATP-dependent Clp protease proteolytic subunit 5, chloroplastic ATP-dependent Clp protease proteolytic subunit 5, chloroplastic-like ATP-dependent Clp protease proteolytic subunit 5, chloroplastic ATP-dependent Clp protease proteolytic subunit 5, chloroplastic ATP-dependent Clp protease proteolytic subunit 5, chloroplastic-like ATP-dependent Clp protease proteolytic subunit 5, chloroplastic ATP-dependent Clp protease proteolytic subunit 5, chloroplastic ATP-dependent Clp protease proteolytic subunit 5, chloroplastic ATP-dependent Clp protease proteolytic subunit 5, chloroplastic ATP-dependent Clp protease proteolytic subunit 5, chloroplastic Clp protease 2 proteolytic subunit ATP-dependent Clp protease proteolytic subunit 5, chloroplastic ATP-dependent Clp protease proteolytic subunit 5, chloroplastic-like ATP-dependent Clp protease proteolytic subunit 5, chloroplastic ATP-dependent Clp protease proteolytic subunit 5, chloroplastic ATP-dependent Clp protease proteolytic subunit 5, chloroplastic ATP-dependent Clp protease proteolytic subunit 5, chloroplastic-like uncharacterized LOC100194286 ATP-dependent Clp protease proteolytic subunit 5, chloroplastic ATP-dependent Clp protease proteolytic subunit 5, chloroplastic ATP-dependent Clp protease proteolytic subunit 5, chloroplastic ATP-dependent Clp protease proteolytic subunit 5, chloroplastic ATP-dependent Clp protease proteolytic subunit 5, chloroplastic ATP-dependent Clp protease proteolytic subunit 5, chloroplastic uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04146 Peroxisome 2
bra01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00480 Glutathione metabolism 2
bna03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00730 Thiamine metabolism 2
ghi01240 Biosynthesis of cofactors 2
ghi00040 Pentose and glucuronate interconversions 2
ghi00900 Terpenoid backbone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 3
cit00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00270 Cysteine and methionine metabolism 2
gma00920 Sulfur metabolism 2
gma01200 Carbon metabolism 2
gma01230 Biosynthesis of amino acids 2
gma01320 Sulfur cycle 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 10
ppo00053 Ascorbate and aldarate metabolism 2
ppo00480 Glutathione metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 4
ppo01240 Biosynthesis of cofactors 2
ppo00240 Pyrimidine metabolism 2
ppo01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00900 Terpenoid backbone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03082 ATP-dependent chromatin remodeling 2
nta03083 Polycomb repressive complex 2
nta00240 Pyrimidine metabolism 2
nta01240 Biosynthesis of cofactors 2
nta00220 Arginine biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00220 Arginine biosynthesis 2
nta00250 Alanine, aspartate and glutamate metabolism 2
nta01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00220 Arginine biosynthesis 2
nta00250 Alanine, aspartate and glutamate metabolism 2
nta01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00900 Terpenoid backbone biosynthesis 3
tae03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00900 Terpenoid backbone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu01230 Biosynthesis of amino acids 3
hvu00300 Lysine biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre00260 Glycine, serine and threonine metabolism 2
cre01200 Carbon metabolism 2
cre01230 Biosynthesis of amino acids 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 839433 103844577 103836649 106370909 125591783 106401510 107924745 107946002 121210928 102622645 102607512 100802533 100798621 100246849 7455425 7481404 11426620 11412270 544244 102579725 107771859 107809867 107777151 4332615 103634566 100194286 123085673 123092330 123097672 123448819 8083988 100831676 5716620
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