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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-m.9   RABA3   RAB GTPase homolog A3 
 ath-u.5   RABA3   RAB GTPase homolog A3 
 ath-r.7   RABA3   RAB GTPase homolog A3 
 ath-e.2   RABA3   RAB GTPase homolog A3 
 ath-m.4.bio   RABA3   RAB GTPase homolog A3 
 ath-m.4.hor   RABA3   RAB GTPase homolog A3 
 ath-m.4.lig   RABA3   RAB GTPase homolog A3 
 ath-m.4.str   RABA3   RAB GTPase homolog A3 
 ath-m.4.tis   RABA3   RAB GTPase homolog A3 
 bra-r.6   103844632   ras-related protein RABA3 
 bna-r.1   106370070   ras-related protein RABA3 
 bna-r.1   106399537   ras-related protein RABA3-like 
 ghi-r.1   107954440   ras-related protein RABA3 
 ghi-r.1   107952977   ras-related protein RABA3 
 ghi-r.1   107922897   ras-related protein RABA3 
 cit-r.1   102611936   ras-related protein RABA3 
 cit-r.1   127900531   ras-related protein RABA3-like 
 gma-u.5   100787725   ras-related protein RABA3-like 
 gma-u.5   100797794   ras-related protein RABA3-like 
 gma-u.5   121173763   ras-related protein RABA3 
 vvi-u.5   100260897   ras-related protein RABA3 
 ppo-u.5   7457414   ras-related protein RABA3 
 ppo-u.5   7486792   ras-related protein RABA3 
 mtr-u.5   11409641   ras-related protein RABA3 
 mtr-u.5   11421403   ras-related protein RABA3 
 sly-u.5   101259980   ras-related protein RABA3 
 sot-r.1   102593940   ras-related protein RABA3 
 nta-r.1   107819881   ras-related protein RABA3-like 
 nta-r.1   107827746   ras-related protein RABA3-like 
 osa-u.5   4347642   ras-related protein RABA3 
 osa-u.5   4342063   ras-related protein RABA3 
 zma-u.5   103626451   uncharacterized LOC103626451 
 zma-u.5   100285596   ras-related protein Rab11A 
 tae-r.2   123104497   ras-related protein RABA3 
 tae-r.2   123112784   ras-related protein RABA3 
 tae-r.2   123122261   ras-related protein RABA3 
 hvu-r.1   123407242   ras-related protein RABA3-like 
 hvu-r.1   123400029   ras-related protein RABA3-like 
 sbi-r.1   8054884   ras-related protein RABA3 
 bdi-r.1   100836823   ras-related protein RABA3 

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Top 50 coexpressed genes to RABA3 (ath-m.9 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to RABA3 (ath-m.9 coexpression data)

CoexMap"839493"


athRABA3 | Entrez gene ID : 839493      
Species ath bra bna ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 9 1 2 3 2 3 1 2 2 1 1 2 2 2 3 2 1 1 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0042546 [list] [network] cell wall biogenesis  (199 genes)  IMP  
GO CC
GO:0009504 [list] [network] cell plate  (43 genes)  IDA  
GO:0005768 [list] [network] endosome  (359 genes)  IDA  
GO:0005576 [list] [network] extracellular region  (3158 genes)  HDA  
GO:0005634 [list] [network] nucleus  (10367 genes)  HDA ISM  
GO MF
Protein NP_171628.2 [sequence] [blastp]
Subcellular
localization
wolf
chlo 3,  nucl 3,  cyto 2,  mito 2  (predict for NP_171628.2)
Subcellular
localization
TargetP
other 9  (predict for NP_171628.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-m.9
for
RABA3
ath-u.5
for
RABA3
ath-r.7
for
RABA3
ath-e.2
for
RABA3
ath-m.4.bio
for
RABA3
ath-m.4.hor
for
RABA3
ath-m.4.lig
for
RABA3
ath-m.4.str
for
RABA3
ath-m.4.tis
for
RABA3
bra-r.6
for
103844632
bna-r.1
for
106370070
bna-r.1
for
106399537
ghi-r.1
for
107954440
ghi-r.1
for
107952977
ghi-r.1
for
107922897
cit-r.1
for
102611936
cit-r.1
for
127900531
gma-u.5
for
100787725
gma-u.5
for
100797794
gma-u.5
for
121173763
vvi-u.5
for
100260897
ppo-u.5
for
7457414
ppo-u.5
for
7486792
mtr-u.5
for
11409641
mtr-u.5
for
11421403
sly-u.5
for
101259980
sot-r.1
for
102593940
nta-r.1
for
107819881
nta-r.1
for
107827746
osa-u.5
for
4347642
osa-u.5
for
4342063
zma-u.5
for
103626451
zma-u.5
for
100285596
tae-r.2
for
123104497
tae-r.2
for
123112784
tae-r.2
for
123122261
hvu-r.1
for
123407242
hvu-r.1
for
123400029
sbi-r.1
for
8054884
bdi-r.1
for
100836823


Ortholog ID: 5898
Species ath bra bna bna ghi ghi ghi cit cit gma gma gma vvi ppo ppo mtr mtr sly sot nta nta osa osa zma zma tae tae tae hvu hvu sbi bdi
Symbol RABA3 LOC103844632 LOC106370070 LOC106399537 LOC107954440 LOC107952977 LOC107922813 LOC102611936 LOC127900531 LOC100787725 LOC100797794 LOC121173763 LOC100260897 LOC7457414 LOC7486792 LOC11409641 LOC11421403 LOC101259980 LOC102593940 LOC107819881 LOC107827746 LOC4347642 LOC4342063 LOC103626451 LOC100285596 LOC123112784 LOC123122261 LOC123167839 LOC123407242 LOC123400029 LOC8054884 LOC100836823
Function* RAB GTPase homolog A3 ras-related protein RABA3 ras-related protein RABA3 ras-related protein RABA3-like ras-related protein RABA3 ras-related protein RABA3 ras-related protein RABA3 ras-related protein RABA3 ras-related protein RABA3-like ras-related protein RABA3-like ras-related protein RABA3-like ras-related protein RABA3 ras-related protein RABA3 ras-related protein RABA3 ras-related protein RABA3 ras-related protein RABA3 ras-related protein RABA3 ras-related protein RABA3 ras-related protein RABA3 ras-related protein RABA3-like ras-related protein RABA3-like ras-related protein RABA3 ras-related protein RABA3 uncharacterized LOC103626451 ras-related protein Rab11A ras-related protein RABA3 ras-related protein RABA3 ras-related protein RABA3 ras-related protein RABA3-like ras-related protein RABA3-like ras-related protein RABA3 ras-related protein RABA3
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00190 Oxidative phosphorylation 4
bra04145 Phagosome 4
bra00500 Starch and sucrose metabolism 3
bra01230 Biosynthesis of amino acids 3
bra00010 Glycolysis / Gluconeogenesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna01240 Biosynthesis of cofactors 7
bna00270 Cysteine and methionine metabolism 4
bna00670 One carbon pool by folate 4
bna00999 Biosynthesis of various plant secondary metabolites 4
bna01230 Biosynthesis of amino acids 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna01240 Biosynthesis of cofactors 7
bna00270 Cysteine and methionine metabolism 4
bna00670 One carbon pool by folate 4
bna00999 Biosynthesis of various plant secondary metabolites 4
bna01230 Biosynthesis of amino acids 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04145 Phagosome 4
cit04517 IgSF CAM signaling 4
cit04814 Motor proteins 4
cit04820 Cytoskeleton in muscle cells 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04145 Phagosome 4
cit04517 IgSF CAM signaling 4
cit04814 Motor proteins 4
cit04820 Cytoskeleton in muscle cells 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00940 Phenylpropanoid biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00040 Pentose and glucuronate interconversions 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00500 Starch and sucrose metabolism 2
ppo04145 Phagosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00410 beta-Alanine metabolism 3
osa00640 Propanoate metabolism 2
osa01200 Carbon metabolism 2
osa00592 alpha-Linolenic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00040 Pentose and glucuronate interconversions 3
zma00910 Nitrogen metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00052 Galactose metabolism 3
tae00500 Starch and sucrose metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00905 Brassinosteroid biosynthesis 3
tae00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
tae00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04142 Lysosome 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 839493 103844632 106370070 106399537 107954440 107952977 107922813 102611936 127900531 100787725 100797794 121173763 100260897 7457414 7486792 11409641 11421403 101259980 102593940 107819881 107827746 4347642 4342063 103626451 100285596 123112784 123122261 123167839 123407242 123400029 8054884 100836823
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