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Orthologous genes in OrthoFinder**

Species Gene Description
 osa-u.5   4347642   ras-related protein RABA3 
 osa-r.6   4347642   ras-related protein RABA3 
 osa-m.8   4347642   ras-related protein RABA3 
 osa-e.1   4347642   ras-related protein RABA3 
 osa-u.5   4342063   ras-related protein RABA3 
 zma-u.5   103626451   uncharacterized LOC103626451 
 zma-u.5   100285596   ras-related protein Rab11A 
 ath-u.5   RABA3   RAB GTPase homolog A3 
 gma-u.5   100797794   ras-related protein RABA3-like 
 gma-u.5   100799439   ras-related protein RABA3 
 gma-u.5   100787725   ras-related protein RABA3-like 
 sly-u.5   101259980   ras-related protein RABA3 
 vvi-u.5   100260897   ras-related protein RABA3 
 ppo-u.5   7457414   ras-related protein RABA3 
 ppo-u.5   7486792   ras-related protein RABA3 
 mtr-u.5   11409641   ras-related protein RABA3 
 mtr-u.5   11421403   ras-related protein RABA3 

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Top 50 coexpressed genes to 4347642 (osa-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 4347642 (osa-u.5 coexpression data)

CoexMap"4347642"


osaLOC4347642 | Entrez gene ID : 4347642      
Species osa zma ath gma sly vvi ppo mtr hvu sot tae nta bra cit ghi bna bdi sbi cre
Paralog 5 2 1 3 1 1 2 2 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0016192 [list] [network] vesicle-mediated transport  (471 genes)  IEA  
GO CC
GO:0005768 [list] [network] endosome  (174 genes)  IEA  
GO MF
GO:0003924 [list] [network] GTPase activity  (183 genes)  IEA  
GO:0005525 [list] [network] GTP binding  (207 genes)  IEA  
Protein NP_001409840.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 5,  chlo 2,  nucl 2  (predict for NP_001409840.1)
Subcellular
localization
TargetP
other 9  (predict for NP_001409840.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

osa-u.5
for
4347642

.
osa-r.6
for
4347642

.
osa-m.8
for
4347642

.
osa-e.1
for
4347642

.
osa-u.5
for
4342063

.
zma-u.5
for
103626451

.
zma-u.5
for
100285596

.
ath-u.5
for
RABA3

.
gma-u.5
for
100797794

.
gma-u.5
for
100799439

.
gma-u.5
for
100787725

.
sly-u.5
for
101259980

.
vvi-u.5
for
100260897

.
ppo-u.5
for
7457414

.
ppo-u.5
for
7486792

.
mtr-u.5
for
11409641

.
mtr-u.5
for
11421403

.


Ortholog ID: 5898
Species ath gma gma sly osa osa zma zma bra vvi ppo ppo mtr mtr tae tae hvu hvu ghi ghi bna bna sbi sot cit cit bdi nta nta
Symbol RABA3 LOC121173763 LOC100787725 LOC101259980 LOC4342063 LOC4347642 LOC100285596 LOC103626451 LOC103844632 LOC100260897 LOC7486792 LOC7457414 LOC11421403 LOC11409641 LOC123112784 LOC123122261 LOC123400029 LOC123407242 LOC107954440 LOC107952977 LOC106370070 LOC106399537 LOC8054884 LOC102593940 LOC127900531 LOC102611936 LOC100836823 LOC107827746 LOC107819881
Function* RAB GTPase homolog A3 ras-related protein RABA3 ras-related protein RABA3-like ras-related protein RABA3 ras-related protein RABA3 ras-related protein RABA3 ras-related protein Rab11A uncharacterized LOC103626451 ras-related protein RABA3 ras-related protein RABA3 ras-related protein RABA3 ras-related protein RABA3 ras-related protein RABA3 ras-related protein RABA3 ras-related protein RABA3 ras-related protein RABA3 ras-related protein RABA3-like ras-related protein RABA3-like ras-related protein RABA3 ras-related protein RABA3 ras-related protein RABA3 ras-related protein RABA3-like ras-related protein RABA3 ras-related protein RABA3 ras-related protein RABA3-like ras-related protein RABA3 ras-related protein RABA3 ras-related protein RABA3-like ras-related protein RABA3-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00040 Pentose and glucuronate interconversions 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00940 Phenylpropanoid biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00410 beta-Alanine metabolism 3
osa00640 Propanoate metabolism 2
osa01200 Carbon metabolism 2
osa00592 alpha-Linolenic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00040 Pentose and glucuronate interconversions 3
zma00910 Nitrogen metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00190 Oxidative phosphorylation 4
bra04145 Phagosome 4
bra00500 Starch and sucrose metabolism 3
bra01230 Biosynthesis of amino acids 3
bra00010 Glycolysis / Gluconeogenesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00500 Starch and sucrose metabolism 2
ppo04145 Phagosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00052 Galactose metabolism 3
tae00500 Starch and sucrose metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna01240 Biosynthesis of cofactors 7
bna00270 Cysteine and methionine metabolism 4
bna00670 One carbon pool by folate 4
bna00999 Biosynthesis of various plant secondary metabolites 4
bna01230 Biosynthesis of amino acids 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna01240 Biosynthesis of cofactors 7
bna00270 Cysteine and methionine metabolism 4
bna00670 One carbon pool by folate 4
bna00999 Biosynthesis of various plant secondary metabolites 4
bna01230 Biosynthesis of amino acids 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04145 Phagosome 4
cit04517 IgSF CAM signaling 4
cit04814 Motor proteins 4
cit04820 Cytoskeleton in muscle cells 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04145 Phagosome 4
cit04517 IgSF CAM signaling 4
cit04814 Motor proteins 4
cit04820 Cytoskeleton in muscle cells 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04142 Lysosome 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 839493 121173763 100787725 101259980 4342063 4347642 100285596 103626451 103844632 100260897 7486792 7457414 11421403 11409641 123112784 123122261 123400029 123407242 107954440 107952977 106370070 106399537 8054884 102593940 127900531 102611936 100836823 107827746 107819881
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