ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
ath-m.9	AT1G32580	plastid developmental protein DAG
ath-u.5	AT1G32580	plastid developmental protein DAG
ath-r.7	AT1G32580	plastid developmental protein DAG
ath-e.2	AT1G32580	plastid developmental protein DAG
ath-m.4.bio	AT1G32580	plastid developmental protein DAG
ath-m.4.hor	AT1G32580	plastid developmental protein DAG
ath-m.4.lig	AT1G32580	plastid developmental protein DAG
ath-m.4.str	AT1G32580	plastid developmental protein DAG
ath-m.4.tis	AT1G32580	plastid developmental protein DAG
ath-u.5	MORF6	plastid developmental protein DAG
bra-r.6	103867378	multiple organellar RNA editing factor 6, mitochondrial
bra-r.6	103865438	multiple organellar RNA editing factor 6, mitochondrial
bna-r.1	106366976	multiple organellar RNA editing factor 6, mitochondrial-like
bna-r.1	125600516	multiple organellar RNA editing factor 6, mitochondrial-like
bna-r.1	106447307	multiple organellar RNA editing factor 6, mitochondrial-like
ghi-r.1	107942212	multiple organellar RNA editing factor 2, chloroplastic
ghi-r.1	107932165	multiple organellar RNA editing factor 2, chloroplastic
cit-r.1	102614394	multiple organellar RNA editing factor 2, chloroplastic
gma-u.5	100795099	multiple organellar RNA editing factor 2, chloroplastic
gma-u.5	100306054	multiple organellar RNA editing factor 6-like
vvi-u.5	100248131	multiple organellar RNA editing factor 2, chloroplastic
vvi-u.5	100251024	DAG protein, chloroplastic-like
ppo-u.5	7473469	multiple organellar RNA editing factor 2, chloroplastic
ppo-u.5	7459979	multiple organellar RNA editing factor 2, chloroplastic
mtr-u.5	25482991	multiple organellar RNA editing factor 2, chloroplastic
sly-u.5	101264429	multiple organellar RNA editing factor 2, chloroplastic
sot-r.1	102589422	multiple organellar RNA editing factor 2, chloroplastic-like
nta-r.1	107761497	multiple organellar RNA editing factor 2, chloroplastic
nta-r.1	107812745	multiple organellar RNA editing factor 2, chloroplastic-like
nta-r.1	107773489	multiple organellar RNA editing factor 2, chloroplastic
osa-u.5	4336884	multiple organellar RNA editing factor 2, chloroplastic
osa-u.5	4339932	multiple organellar RNA editing factor 2, chloroplastic
zma-u.5	100383758	uncharacterized LOC100383758
zma-u.5	100283114	uncharacterized LOC100283114
zma-u.5	100192474	Multiple organellar RNA editing factor 2 chloroplastic
tae-r.2	123046552	multiple organellar RNA editing factor 2, chloroplastic
tae-r.2	123054410	multiple organellar RNA editing factor 2, chloroplastic
tae-r.2	123088287	multiple organellar RNA editing factor 2, chloroplastic
hvu-r.1	123427723	multiple organellar RNA editing factor 2, chloroplastic-like
hvu-r.1	123410941	multiple organellar RNA editing factor 2, chloroplastic-like
sbi-r.1	8069026	multiple organellar RNA editing factor 2, chloroplastic
sbi-r.1	8063924	multiple organellar RNA editing factor 2, chloroplastic
bdi-r.1	100843852	multiple organellar RNA editing factor 2, chloroplastic
bdi-r.1	100837841	multiple organellar RNA editing factor 2, chloroplastic
bdi-r.1	100844397	multiple organellar RNA editing factor 2, chloroplastic

Top 50 coexpressed genes to AT1G32580 (ath-m.9 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to AT1G32580 (ath-m.9 coexpression data)

CoexMap"840152"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO:0080156 [list] [network] mitochondrial mRNA modification

(26 genes)

IMP

GO CC

GO:0005739 [list] [network] mitochondrion	(4244 genes)	HDA IDA IMP
GO:0009507 [list] [network] chloroplast	(5014 genes)	ISM
GO:0005634 [list] [network] nucleus	(10367 genes)	HDA

GO MF

GO:0042803 [list] [network] protein homodimerization activity	(237 genes)	IPI
GO:0046983 [list] [network] protein dimerization activity	(446 genes)	IPI

Protein

NP_174536.1 [sequence] [blastp]

Subcellular
localization
wolf

chlo 5, mito 4

(predict for NP_174536.1)

Subcellular
localization
TargetP

chlo 8, mito 7

(predict for NP_174536.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target				Condition-specific^*					Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	ath-m.9 for AT1G32580	ath-u.5 for AT1G32580	ath-r.7 for AT1G32580	ath-e.2 for AT1G32580	ath-m.4.bio for AT1G32580	ath-m.4.hor for AT1G32580	ath-m.4.lig for AT1G32580	ath-m.4.str for AT1G32580	ath-m.4.tis for AT1G32580	ath-u.5 for MORF6	bra-r.6 for 103867378	bra-r.6 for 103865438	bna-r.1 for 106366976	bna-r.1 for 125600516	bna-r.1 for 106447307	ghi-r.1 for 107942212	ghi-r.1 for 107932165	cit-r.1 for 102614394	gma-u.5 for 100795099	gma-u.5 for 100306054	vvi-u.5 for 100248131	vvi-u.5 for 100251024	ppo-u.5 for 7473469	ppo-u.5 for 7459979	mtr-u.5 for 25482991	sly-u.5 for 101264429	sot-r.1 for 102589422	nta-r.1 for 107761497	nta-r.1 for 107812745	nta-r.1 for 107773489	osa-u.5 for 4336884	osa-u.5 for 4339932	zma-u.5 for 100383758	zma-u.5 for 100283114	zma-u.5 for 100192474	tae-r.2 for 123046552	tae-r.2 for 123054410	tae-r.2 for 123088287	hvu-r.1 for 123427723	hvu-r.1 for 123410941	sbi-r.1 for 8069026	sbi-r.1 for 8063924	bdi-r.1 for 100843852	bdi-r.1 for 100837841	bdi-r.1 for 100844397

Ortholog

Ortholog ID: 3317

Species

ath

bra

bna

ghi

cit

gma

vvi

ppo

mtr

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

Symbol

MORF6

Function^*

plastid developmental protein DAG

multiple organellar RNA editing factor 6, mitochondrial