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Orthologous genes in OrthoFinder**

Species Gene Description
 mtr-u.5   25482991   multiple organellar RNA editing factor 2, chloroplastic 
 mtr-r.5   25482991   multiple organellar RNA editing factor 2, chloroplastic 
 mtr-m.5   25482991   multiple organellar RNA editing factor 2, chloroplastic 
 gma-u.5   100795099   multiple organellar RNA editing factor 2, chloroplastic 
 gma-u.5   100306054   multiple organellar RNA editing factor 6-like 
 ppo-u.5   7473469   multiple organellar RNA editing factor 2, chloroplastic 
 ppo-u.5   7459979   multiple organellar RNA editing factor 2, chloroplastic 
 ath-u.5   MORF6   plastid developmental protein DAG 
 ath-u.5   AT1G32580   plastid developmental protein DAG 
 vvi-u.5   100248131   multiple organellar RNA editing factor 2, chloroplastic 
 vvi-u.5   100251024   DAG protein, chloroplastic-like 
 sly-u.5   101264429   multiple organellar RNA editing factor 2, chloroplastic 
 osa-u.5   4336884   multiple organellar RNA editing factor 2, chloroplastic 
 osa-u.5   4339932   multiple organellar RNA editing factor 2, chloroplastic 
 zma-u.5   100383758   uncharacterized LOC100383758 
 zma-u.5   100283114   uncharacterized LOC100283114 
 zma-u.5   100192474   Multiple organellar RNA editing factor 2 chloroplastic 

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Top 50 coexpressed genes to 25482991 (mtr-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 25482991 (mtr-u.5 coexpression data)

CoexMap"25482991"


mtrLOC25482991 | Entrez gene ID : 25482991      
Species mtr gma ppo ath vvi sly osa zma bdi hvu bra cit bna sbi ghi sot nta cre tae
Paralog 3 2 2 2 2 1 2 3 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0016554 [list] [network] cytidine to uridine editing  (10 genes)  IEA  
GO:0080156 [list] [network] mitochondrial mRNA modification  (10 genes)  IEA  
GO CC
GO:0005739 [list] [network] mitochondrion  (694 genes)  IEA  
GO MF
Protein XP_013467069.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 10  (predict for XP_013467069.1)
Subcellular
localization
TargetP
chlo 9,  mito 3  (predict for XP_013467069.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

mtr-u.5
for
25482991
mtr-r.5
for
25482991
mtr-m.5
for
25482991
gma-u.5
for
100795099
gma-u.5
for
100306054
ppo-u.5
for
7473469
ppo-u.5
for
7459979
ath-u.5
for
MORF6
ath-u.5
for
AT1G32580
vvi-u.5
for
100248131
vvi-u.5
for
100251024
sly-u.5
for
101264429
osa-u.5
for
4336884
osa-u.5
for
4339932
zma-u.5
for
100383758
zma-u.5
for
100283114
zma-u.5
for
100192474


Ortholog ID: 3317
Species mtr gma gma ppo ppo ath ath bra vvi vvi ghi ghi bna bna cit sly sot nta nta osa osa zma zma tae tae hvu hvu sbi sbi bdi bdi
Symbol LOC25482991 LOC100306054 LOC100795099 LOC7473469 LOC7459979 MORF6 AT1G32580 LOC103865438 LOC100248131 LOC100251024 LOC107932165 LOC107942212 LOC106366976 LOC125600516 LOC102614394 LOC101264429 LOC102589422 LOC107773489 LOC107761497 LOC4339932 LOC4336884 LOC100383758 LOC100283838 LOC123190288 LOC123054410 LOC123427723 LOC123410941 LOC8069026 LOC8063924 LOC100843852 LOC100845907
Function* multiple organellar RNA editing factor 2, chloroplastic multiple organellar RNA editing factor 6-like multiple organellar RNA editing factor 2, chloroplastic multiple organellar RNA editing factor 2, chloroplastic multiple organellar RNA editing factor 2, chloroplastic plastid developmental protein DAG plastid developmental protein DAG multiple organellar RNA editing factor 6, mitochondrial multiple organellar RNA editing factor 2, chloroplastic DAG protein, chloroplastic-like multiple organellar RNA editing factor 2, chloroplastic multiple organellar RNA editing factor 2, chloroplastic multiple organellar RNA editing factor 6, mitochondrial-like multiple organellar RNA editing factor 6, mitochondrial-like multiple organellar RNA editing factor 2, chloroplastic multiple organellar RNA editing factor 2, chloroplastic multiple organellar RNA editing factor 2, chloroplastic-like multiple organellar RNA editing factor 2, chloroplastic multiple organellar RNA editing factor 2, chloroplastic multiple organellar RNA editing factor 2, chloroplastic multiple organellar RNA editing factor 2, chloroplastic uncharacterized LOC100383758 DAG protein multiple organellar RNA editing factor 2, chloroplastic multiple organellar RNA editing factor 2, chloroplastic multiple organellar RNA editing factor 2, chloroplastic-like multiple organellar RNA editing factor 2, chloroplastic-like multiple organellar RNA editing factor 2, chloroplastic multiple organellar RNA editing factor 2, chloroplastic multiple organellar RNA editing factor 2, chloroplastic multiple organellar RNA editing factor 2, chloroplastic
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03018 RNA degradation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00280 Valine, leucine and isoleucine degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00280 Valine, leucine and isoleucine degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00290 Valine, leucine and isoleucine biosynthesis 2
ppo01210 2-Oxocarboxylic acid metabolism 2
ppo01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 4
ath00300 Lysine biosynthesis 3
ath01230 Biosynthesis of amino acids 3
ath00261 Monobactam biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04626 Plant-pathogen interaction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03008 Ribosome biogenesis in eukaryotes 4
vvi03010 Ribosome 3
vvi03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 3
vvi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00860 Porphyrin metabolism 2
ghi00970 Aminoacyl-tRNA biosynthesis 2
ghi01240 Biosynthesis of cofactors 2
ghi00230 Purine metabolism 2
ghi00240 Pyrimidine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00860 Porphyrin metabolism 2
ghi00970 Aminoacyl-tRNA biosynthesis 2
ghi01240 Biosynthesis of cofactors 2
ghi00230 Purine metabolism 2
ghi00240 Pyrimidine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00590 Arachidonic acid metabolism 2
bna03013 Nucleocytoplasmic transport 2
bna04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 3
bna00590 Arachidonic acid metabolism 2
bna03013 Nucleocytoplasmic transport 2
bna04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03008 Ribosome biogenesis in eukaryotes 4
osa03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03040 Spliceosome 5
zma03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00350 Tyrosine metabolism 2
tae00360 Phenylalanine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 8
hvu03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 3
bdi03020 RNA polymerase 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 25482991 100306054 100795099 7473469 7459979 818091 840152 103865438 100248131 100251024 107932165 107942212 106366976 125600516 102614394 101264429 102589422 107773489 107761497 4339932 4336884 100383758 100283838 123190288 123054410 123427723 123410941 8069026 8063924 100843852 100845907
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