ATTED-II : GeneCoexpression result

Orthologous genes in OrthoFinder^**

Species	Gene	Description
ath-m.9	AT1G44810	DNA-binding storekeeper protein-related transcriptional regulator
ath-u.5	AT1G44810	DNA-binding storekeeper protein-related transcriptional regulator
ath-r.7	AT1G44810	DNA-binding storekeeper protein-related transcriptional regulator
ath-e.2	AT1G44810	DNA-binding storekeeper protein-related transcriptional regulator
ath-m.4.bio	AT1G44810	DNA-binding storekeeper protein-related transcriptional regulator
ath-m.4.hor	AT1G44810	DNA-binding storekeeper protein-related transcriptional regulator
ath-m.4.lig	AT1G44810	DNA-binding storekeeper protein-related transcriptional regulator
ath-m.4.str	AT1G44810	DNA-binding storekeeper protein-related transcriptional regulator
ath-m.4.tis	AT1G44810	DNA-binding storekeeper protein-related transcriptional regulator
bra-r.6	103848165	probable transcription factor At1g61730
bra-r.6	103838435	probable transcription factor At1g61730
bra-r.6	103838549	probable transcription factor At1g61730
bna-r.1	125591770	probable transcription factor At1g61730
bna-r.1	125597915	probable transcription factor At1g61730
ghi-r.1	107915721	probable transcription factor At1g61730
ghi-r.1	107896271	probable transcription factor At1g61730
ghi-r.1	107936159	GLABROUS1 enhancer-binding protein-like
cit-r.1	102620034	probable transcription factor At1g11510
cit-r.1	102610695	probable transcription factor At1g11510
gma-u.5	100782985	GLABROUS1 enhancer-binding protein-like
gma-u.5	100791520	STOREKEEPER protein
vvi-u.5	100854363	STOREKEEPER protein
ppo-u.5	7478657	GLABROUS1 enhancer-binding protein-like
ppo-u.5	7478738	GLABROUS1 enhancer-binding protein-like
mtr-u.5	11409742	GLABROUS1 enhancer-binding protein-like
mtr-u.5	11424230	probable transcription factor At4g00390
sly-u.5	101263019	GLABROUS1 enhancer-binding protein-like
sot-r.1	102584580	mediator-associated protein 1-like
nta-r.1	107795200	GLABROUS1 enhancer-binding protein-like
nta-r.1	107826502	putative transcription factor At1g61730

Annotation

functional annotation

KEGG

GO BP

GO:0046686 [list] [network] response to cadmium ion	(81 genes)	IMP
GO:0045893 [list] [network] positive regulation of DNA-templated transcription	(262 genes)	IDA
GO:0006355 [list] [network] regulation of DNA-templated transcription	(1618 genes)	TAS

GO CC

GO:0005634 [list] [network] nucleus

(10367 genes)

ISM

GO MF

GO:0000976 [list] [network] transcription cis-regulatory region binding	(716 genes)	IPI
GO:0005515 [list] [network] protein binding	(5363 genes)	IPI

Protein

NP_564491.1 [sequence] [blastp]

Subcellular
localization
wolf

nucl 8, cyto_nucl 4, mito 1, plas 1, mito_plas 1

(predict for NP_564491.1)

Subcellular
localization
TargetP

other 8

(predict for NP_564491.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target				Condition-specific^*					Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	ath-m.9 for AT1G44810	ath-u.5 for AT1G44810	ath-r.7 for AT1G44810	ath-e.2 for AT1G44810	ath-m.4.bio for AT1G44810	ath-m.4.hor for AT1G44810	ath-m.4.lig for AT1G44810	ath-m.4.str for AT1G44810	ath-m.4.tis for AT1G44810	bra-r.6 for 103848165	bra-r.6 for 103838435	bra-r.6 for 103838549	bna-r.1 for 125591770	bna-r.1 for 125597915	ghi-r.1 for 107915721	ghi-r.1 for 107896271	ghi-r.1 for 107936159	cit-r.1 for 102620034	cit-r.1 for 102610695	gma-u.5 for 100782985	gma-u.5 for 100791520	vvi-u.5 for 100854363	ppo-u.5 for 7478657	ppo-u.5 for 7478738	mtr-u.5 for 11409742	mtr-u.5 for 11424230	sly-u.5 for 101263019	sot-r.1 for 102584580	nta-r.1 for 107795200	nta-r.1 for 107826502

Ortholog

Ortholog ID: 2008

Species

ath

bra

bna

ghi

cit

gma

vvi

ppo

mtr

sly

sot

nta

Symbol

Function^*

DNA-binding storekeeper protein-related transcriptional regulator

probable transcription factor At1g61730

probable transcription factor At1g11510

probable transcription factor At1g61730