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Orthologous genes in OrthoFinder**

Species Gene Description
 mtr-u.5   11424230   probable transcription factor At4g00390 
 mtr-r.5   11424230   probable transcription factor At4g00390 
 mtr-m.5   11424230   probable transcription factor At4g00390 
 mtr-u.5   11409742   GLABROUS1 enhancer-binding protein-like 
 gma-u.5   100782985   GLABROUS1 enhancer-binding protein-like 
 gma-u.5   100791520   STOREKEEPER protein 
 ppo-u.5   7478657   GLABROUS1 enhancer-binding protein-like 
 ppo-u.5   7478738   GLABROUS1 enhancer-binding protein-like 
 bra-r.6   103848165   probable transcription factor At1g61730 
 bra-r.6   103838549   probable transcription factor At1g61730 
 bra-r.6   103863621   probable transcription factor At1g61730 
 vvi-u.5   100854363   STOREKEEPER protein 
 ghi-r.1   107915721   probable transcription factor At1g61730 
 ghi-r.1   107896271   probable transcription factor At1g61730 
 ghi-r.1   107936159   GLABROUS1 enhancer-binding protein-like 
 bna-r.1   125591770   probable transcription factor At1g61730 
 bna-r.1   125597915   probable transcription factor At1g61730 
 cit-r.1   102620034   probable transcription factor At1g11510 
 cit-r.1   102610695   probable transcription factor At1g11510 
 sly-u.5   101263019   GLABROUS1 enhancer-binding protein-like 
 sot-r.1   102584580   mediator-associated protein 1-like 
 nta-r.1   107795200   GLABROUS1 enhancer-binding protein-like 
 nta-r.1   107826502   putative transcription factor At1g61730 

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Top 50 coexpressed genes to 11424230 (mtr-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 11424230 (mtr-u.5 coexpression data)

CoexMap"11424230"


mtrLOC11424230 | Entrez gene ID : 11424230      
Species mtr gma ppo bra vvi ghi bna cit sly sot nta zma cre sbi ath tae osa hvu bdi
Paralog 4 2 2 3 1 3 2 2 1 1 2 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006355 [list] [network] regulation of DNA-templated transcription  (1635 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (2707 genes)  IEA  
GO MF
Protein XP_003593377.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 10  (predict for XP_003593377.1)
Subcellular
localization
TargetP
other 8  (predict for XP_003593377.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

mtr-u.5
for
11424230
mtr-r.5
for
11424230
mtr-m.5
for
11424230
mtr-u.5
for
11409742
gma-u.5
for
100782985
gma-u.5
for
100791520
ppo-u.5
for
7478657
ppo-u.5
for
7478738
bra-r.6
for
103848165
bra-r.6
for
103838549
bra-r.6
for
103863621
vvi-u.5
for
100854363
ghi-r.1
for
107915721
ghi-r.1
for
107896271
ghi-r.1
for
107936159
bna-r.1
for
125591770
bna-r.1
for
125597915
cit-r.1
for
102620034
cit-r.1
for
102610695
sly-u.5
for
101263019
sot-r.1
for
102584580
nta-r.1
for
107795200
nta-r.1
for
107826502


Ortholog ID: 2008
Species mtr mtr gma gma ppo ppo ath ath ath bra bra bra vvi ghi ghi ghi bna bna bna cit cit sly sot nta nta
Symbol LOC11424230 LOC11409742 LOC100782985 LOC100791520 LOC7478657 LOC7478738 AT1G11510 AT4G00390 AT4G00238 LOC103863621 LOC103864145 LOC103831052 LOC100854363 LOC107915721 LOC107936159 LOC107929621 LOC125603611 LOC106348832 LOC106420244 LOC102620034 LOC102610695 LOC101263019 LOC102584580 LOC107795200 LOC107826502
Function* probable transcription factor At4g00390 GLABROUS1 enhancer-binding protein-like GLABROUS1 enhancer-binding protein-like STOREKEEPER protein GLABROUS1 enhancer-binding protein-like GLABROUS1 enhancer-binding protein-like DNA-binding storekeeper protein-related transcriptional regulator DNA-binding storekeeper protein-related transcriptional regulator DNA-binding storekeeper protein-related transcriptional regulator probable transcription factor At1g61730 probable transcription factor At1g11510 probable transcription factor At1g61730 STOREKEEPER protein probable transcription factor At1g61730 GLABROUS1 enhancer-binding protein-like probable transcription factor At1g11510 probable transcription factor At1g61730 probable transcription factor At1g61730 probable transcription factor At1g61730 probable transcription factor At1g11510 probable transcription factor At1g11510 GLABROUS1 enhancer-binding protein-like mediator-associated protein 1-like GLABROUS1 enhancer-binding protein-like putative transcription factor At1g61730
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03008 Ribosome biogenesis in eukaryotes 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00970 Aminoacyl-tRNA biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 3
ath03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 3
bra00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03013 Nucleocytoplasmic transport 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03013 Nucleocytoplasmic transport 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03013 Nucleocytoplasmic transport 3
cit00290 Valine, leucine and isoleucine biosynthesis 2
cit00770 Pantothenate and CoA biosynthesis 2
cit01210 2-Oxocarboxylic acid metabolism 2
cit01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 11424230 11409742 100782985 100791520 7478657 7478738 837694 828200 825892 103863621 103864145 103831052 100854363 107915721 107936159 107929621 125603611 106348832 106420244 102620034 102610695 101263019 102584580 107795200 107826502
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