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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-m.9   ABCI13   non-intrinsic ABC protein 11 
 ath-u.5   ABCI13   non-intrinsic ABC protein 11 
 ath-r.7   ABCI13   non-intrinsic ABC protein 11 
 ath-e.2   ABCI13   non-intrinsic ABC protein 11 
 ath-m.4.bio   ABCI13   non-intrinsic ABC protein 11 
 ath-m.4.hor   ABCI13   non-intrinsic ABC protein 11 
 ath-m.4.lig   ABCI13   non-intrinsic ABC protein 11 
 ath-m.4.str   ABCI13   non-intrinsic ABC protein 11 
 ath-m.4.tis   ABCI13   non-intrinsic ABC protein 11 
 bra-r.6   103852232   protein TRIGALACTOSYLDIACYLGLYCEROL 3, chloroplastic 
 bna-r.1   106406729   protein TRIGALACTOSYLDIACYLGLYCEROL 3, chloroplastic 
 bna-r.1   106411314   protein TRIGALACTOSYLDIACYLGLYCEROL 3, chloroplastic 
 ghi-r.1   107959421   protein TRIGALACTOSYLDIACYLGLYCEROL 3, chloroplastic 
 ghi-r.1   107928247   protein TRIGALACTOSYLDIACYLGLYCEROL 3, chloroplastic 
 ghi-r.1   107909083   protein TRIGALACTOSYLDIACYLGLYCEROL 3, chloroplastic 
 cit-r.1   102616401   protein TRIGALACTOSYLDIACYLGLYCEROL 3, chloroplastic 
 gma-u.5   100789283   protein TRIGALACTOSYLDIACYLGLYCEROL 3, chloroplastic 
 gma-u.5   100783283   protein TRIGALACTOSYLDIACYLGLYCEROL 3, chloroplastic-like 
 vvi-u.5   100246248   protein TRIGALACTOSYLDIACYLGLYCEROL 3, chloroplastic 
 ppo-u.5   112326048   protein TRIGALACTOSYLDIACYLGLYCEROL 3, chloroplastic 
 ppo-u.5   7457982   protein TRIGALACTOSYLDIACYLGLYCEROL 3, chloroplastic 
 mtr-u.5   11406713   protein TRIGALACTOSYLDIACYLGLYCEROL 3, chloroplastic 
 sly-u.5   ABCI5   ABC transporter I family member 5 
 sot-r.1   102604192   protein TRIGALACTOSYLDIACYLGLYCEROL 3, chloroplastic 
 nta-r.1   107800208   protein TRIGALACTOSYLDIACYLGLYCEROL 3, chloroplastic 
 nta-r.1   107798851   protein TRIGALACTOSYLDIACYLGLYCEROL 3, chloroplastic 
 osa-u.5   4333685   protein TRIGALACTOSYLDIACYLGLYCEROL 3, chloroplastic 
 zma-u.5   100280328   uncharacterized LOC100280328 
 tae-r.2   123122664   protein TRIGALACTOSYLDIACYLGLYCEROL 3, chloroplastic 
 tae-r.2   123113142   protein TRIGALACTOSYLDIACYLGLYCEROL 3, chloroplastic 
 tae-r.2   123104861   protein TRIGALACTOSYLDIACYLGLYCEROL 3, chloroplastic 
 hvu-r.1   123452047   protein TRIGALACTOSYLDIACYLGLYCEROL 3, chloroplastic 
 sbi-r.1   8061670   protein TRIGALACTOSYLDIACYLGLYCEROL 3, chloroplastic 
 bdi-r.1   100822073   protein TRIGALACTOSYLDIACYLGLYCEROL 3, chloroplastic 
 cre-r.1   CHLRE_16g658526v5   uncharacterized protein 

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Top 50 coexpressed genes to ABCI13 (ath-m.9 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to ABCI13 (ath-m.9 coexpression data)

CoexMap"842852"


athABCI13 | Entrez gene ID : 842852      
Species ath bra bna ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 9 1 2 3 1 2 1 2 1 1 1 2 1 1 3 1 1 1 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006869 [list] [network] lipid transport  (81 genes)  IMP  
GO CC
GO:0009507 [list] [network] chloroplast  (5014 genes)  HDA IDA ISM  
GO:0009536 [list] [network] plastid  (5443 genes)  HDA  
GO:0005634 [list] [network] nucleus  (10367 genes)  HDA  
GO MF
GO:0016887 [list] [network] ATP hydrolysis activity  (205 genes)  IDA  
GO:0022857 [list] [network] transmembrane transporter activity  (1015 genes)  ISS  
Protein NP_564850.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 7,  chlo_mito 5,  mito 2,  cyto_mito 1  (predict for NP_564850.1)
Subcellular
localization
TargetP
chlo 8  (predict for NP_564850.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-m.9
for
ABCI13
ath-u.5
for
ABCI13
ath-r.7
for
ABCI13
ath-e.2
for
ABCI13
ath-m.4.bio
for
ABCI13
ath-m.4.hor
for
ABCI13
ath-m.4.lig
for
ABCI13
ath-m.4.str
for
ABCI13
ath-m.4.tis
for
ABCI13
bra-r.6
for
103852232
bna-r.1
for
106406729
bna-r.1
for
106411314
ghi-r.1
for
107959421
ghi-r.1
for
107928247
ghi-r.1
for
107909083
cit-r.1
for
102616401
gma-u.5
for
100789283
gma-u.5
for
100783283
vvi-u.5
for
100246248
ppo-u.5
for
112326048
ppo-u.5
for
7457982
mtr-u.5
for
11406713
sly-u.5
for
ABCI5
sot-r.1
for
102604192
nta-r.1
for
107800208
nta-r.1
for
107798851
osa-u.5
for
4333685
zma-u.5
for
100280328
tae-r.2
for
123122664
tae-r.2
for
123113142
tae-r.2
for
123104861
hvu-r.1
for
123452047
sbi-r.1
for
8061670
bdi-r.1
for
100822073
cre-r.1
for
CHLRE_16g658526v5


Ortholog ID: 9277
Species ath bra bna bna ghi ghi ghi cit gma gma vvi ppo ppo mtr sly sot nta nta osa zma tae tae tae hvu sbi bdi cre
Symbol ABCI13 LOC103852232 LOC106406729 LOC106411314 LOC107959421 LOC107928247 LOC107909083 LOC102616401 LOC100789283 LOC100783283 LOC100246248 LOC112326048 LOC7457982 LOC11406713 ABCI5 LOC102604192 LOC107800208 LOC107798851 LOC4333685 LOC100280328 LOC123122664 LOC123113142 LOC123104861 LOC123452047 LOC8061670 LOC100822073 CHLRE_16g658526v5
Function* non-intrinsic ABC protein 11 protein TRIGALACTOSYLDIACYLGLYCEROL 3, chloroplastic protein TRIGALACTOSYLDIACYLGLYCEROL 3, chloroplastic protein TRIGALACTOSYLDIACYLGLYCEROL 3, chloroplastic protein TRIGALACTOSYLDIACYLGLYCEROL 3, chloroplastic protein TRIGALACTOSYLDIACYLGLYCEROL 3, chloroplastic protein TRIGALACTOSYLDIACYLGLYCEROL 3, chloroplastic protein TRIGALACTOSYLDIACYLGLYCEROL 3, chloroplastic protein TRIGALACTOSYLDIACYLGLYCEROL 3, chloroplastic protein TRIGALACTOSYLDIACYLGLYCEROL 3, chloroplastic-like protein TRIGALACTOSYLDIACYLGLYCEROL 3, chloroplastic protein TRIGALACTOSYLDIACYLGLYCEROL 3, chloroplastic protein TRIGALACTOSYLDIACYLGLYCEROL 3, chloroplastic protein TRIGALACTOSYLDIACYLGLYCEROL 3, chloroplastic ABC transporter I family member 5 protein TRIGALACTOSYLDIACYLGLYCEROL 3, chloroplastic protein TRIGALACTOSYLDIACYLGLYCEROL 3, chloroplastic protein TRIGALACTOSYLDIACYLGLYCEROL 3, chloroplastic protein TRIGALACTOSYLDIACYLGLYCEROL 3, chloroplastic uncharacterized LOC100280328 protein TRIGALACTOSYLDIACYLGLYCEROL 3, chloroplastic protein TRIGALACTOSYLDIACYLGLYCEROL 3, chloroplastic protein TRIGALACTOSYLDIACYLGLYCEROL 3, chloroplastic protein TRIGALACTOSYLDIACYLGLYCEROL 3, chloroplastic protein TRIGALACTOSYLDIACYLGLYCEROL 3, chloroplastic protein TRIGALACTOSYLDIACYLGLYCEROL 3, chloroplastic uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03050 Proteasome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03050 Proteasome 6
bna04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma02010 ABC transporters 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04075 Plant hormone signal transduction 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04016 MAPK signaling pathway - plant 7
ppo04075 Plant hormone signal transduction 6
ppo01200 Carbon metabolism 3
ppo00020 Citrate cycle (TCA cycle) 2
ppo00270 Cysteine and methionine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 5
ppo03013 Nucleocytoplasmic transport 2
ppo03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00970 Aminoacyl-tRNA biosynthesis 2
sly01240 Biosynthesis of cofactors 2
sly00564 Glycerophospholipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00270 Cysteine and methionine metabolism 2
sot00010 Glycolysis / Gluconeogenesis 2
sot00020 Citrate cycle (TCA cycle) 2
sot00620 Pyruvate metabolism 2
sot00785 Lipoic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00450 Selenocompound metabolism 2
nta00970 Aminoacyl-tRNA biosynthesis 2
nta03022 Basal transcription factors 2
nta03420 Nucleotide excision repair 2
nta00010 Glycolysis / Gluconeogenesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta01200 Carbon metabolism 5
nta00620 Pyruvate metabolism 4
nta00020 Citrate cycle (TCA cycle) 3
nta00640 Propanoate metabolism 3
nta00450 Selenocompound metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00470 D-Amino acid metabolism 2
osa01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00970 Aminoacyl-tRNA biosynthesis 5
tae00450 Selenocompound metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00450 Selenocompound metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00970 Aminoacyl-tRNA biosynthesis 4
tae00450 Selenocompound metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre01230 Biosynthesis of amino acids 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 842852 103852232 106406729 106411314 107959421 107928247 107909083 102616401 100789283 100783283 100246248 112326048 7457982 11406713 101251573 102604192 107800208 107798851 4333685 100280328 123122664 123113142 123104861 123452047 8061670 100822073 66056555
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